RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 RBM27Q9P2N5 1060 aaKnown RBP12.38□□□□□ -0.43
COLCA1-203ENST00000532918 MCM5P33992 734 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 LDHBP07195 334 aaKnown RBP12.38□□□□□ -0.43
COLCA1-203ENST00000532918 METAP2P50579 478 aaKnown RBP eCLIP12.38□□□□□ -0.43
COLCA1-203ENST00000532918 ZFYVE16Q7Z3T8 1539 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 MAGEB6P1A0A0J9YX57 407 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 GOLGA6L7A0A1B0GV03 622 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 TRIM27P14373 513 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
COLCA1-203ENST00000532918 ZNF772Q68DY9 489 aaPredicted RBP12.38□□□□□ -0.43
COLCA1-203ENST00000532918 USP37Q86T82 979 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 CCDC82Q8N4S0 544 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 BABAM1Q9NWV8 329 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 KIAA0754O94854 1291 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 NCBP1Q09161 790 aaKnown RBP12.38□□□□□ -0.43
COLCA1-203ENST00000532918 MTHFSDQ2M296 383 aaKnown RBP12.38□□□□□ -0.43
COLCA1-203ENST00000532918 LIMCH1Q9UPQ0 1083 aa12.38□□□□□ -0.43
COLCA1-203ENST00000532918 ANXA1P04083 346 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 RHPN1Q8TCX5 695 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 GJA3Q9Y6H8 435 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 BMP15O95972 392 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 TTC6Q86TZ1 520 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 USP16Q9Y5T5 823 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 CFAP74Q9C0B2 1584 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 CKAP2LQ8IYA6 745 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 CALM1P0DP23 149 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 CALM2P0DP24 149 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 CALM3P0DP25 149 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 IFIT1BQ5T764 474 aaKnown RBP12.37□□□□□ -0.43
COLCA1-203ENST00000532918 POLKQ9UBT6 870 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
COLCA1-203ENST00000532918 DENND2AQ9ULE3 1009 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
COLCA1-203ENST00000532918 KIF21AQ7Z4S6 1674 aa12.36□□□□□ -0.43
COLCA1-203ENST00000532918 LIG1P18858 919 aa12.36□□□□□ -0.43
COLCA1-203ENST00000532918 SMARCC2Q8TAQ2 1214 aa12.36□□□□□ -0.43
COLCA1-203ENST00000532918 RIMBP2O15034 1052 aa12.36□□□□□ -0.43
COLCA1-203ENST00000532918 NEK1Q96PY6 1258 aa12.36□□□□□ -0.43
COLCA1-203ENST00000532918 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
COLCA1-203ENST00000532918 GOLGA6L10A6NI86 522 aa12.36□□□□□ -0.43
COLCA1-203ENST00000532918 TBCAO75347 108 aaKnown RBP12.36□□□□□ -0.43
COLCA1-203ENST00000532918 PRAG1Q86YV5 1406 aa12.36□□□□□ -0.43
COLCA1-203ENST00000532918 PICK1Q9NRD5 415 aa12.36□□□□□ -0.43
COLCA1-203ENST00000532918 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
COLCA1-203ENST00000532918 CACNA2D4Q7Z3S7 1137 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 SYCP3Q8IZU3 236 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 JARID2Q92833 1246 aaPredicted RBP12.35□□□□□ -0.43
COLCA1-203ENST00000532918 EYA1Q99502 592 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 SBNO1A3KN83 1393 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 UBA7P41226 1012 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 PLS1Q14651 629 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 MAP3K11Q16584 847 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 TMOD4Q9NZQ9 345 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
COLCA1-203ENST00000532918 ALDH1B1P30837 517 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 KANK3Q6NY19 840 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 GGA1Q9UJY5 639 aa12.35□□□□□ -0.43
COLCA1-203ENST00000532918 PPM1FP49593 454 aaPredicted RBP12.34□□□□□ -0.43
COLCA1-203ENST00000532918 RBM10P98175 930 aaKnown RBP12.34□□□□□ -0.43
COLCA1-203ENST00000532918 SPA17Q15506 151 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 GIMAP7Q8NHV1 300 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 CTAGE5O15320 804 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 BRDTQ58F21 947 aaPredicted RBP12.34□□□□□ -0.43
COLCA1-203ENST00000532918 KIAA1328Q86T90 577 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 BICD1Q96G01 975 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 SH3TC1Q8TE82 1336 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 CCDC174Q6PII3 467 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 FAM114A1Q8IWE2 563 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 KIF4AO95239 1232 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 NFKBIBQ15653 356 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 LARGE2Q8N3Y3 721 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 ANO10Q9NW15 660 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 RTL9Q8NET4 1388 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
COLCA1-203ENST00000532918 UFL1O94874 794 aa12.33□□□□□ -0.43
COLCA1-203ENST00000532918 MICU3Q86XE3 530 aa12.33□□□□□ -0.43
COLCA1-203ENST00000532918 C6orf50Q9HD87 102 aa12.33□□□□□ -0.43
COLCA1-203ENST00000532918 IQSEC3Q9UPP2 1182 aaPredicted RBP12.33□□□□□ -0.43
COLCA1-203ENST00000532918 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.44
COLCA1-203ENST00000532918 CA8P35219 290 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 ANAPC15P60006 121 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 ATP8B2P98198 1209 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 APBB1IPQ7Z5R6 666 aaPredicted RBP12.33□□□□□ -0.44
COLCA1-203ENST00000532918 ORAI2Q96SN7 254 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.44
COLCA1-203ENST00000532918 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.44
COLCA1-203ENST00000532918 AXDND1Q5T1B0 1012 aaPredicted RBP12.33□□□□□ -0.44
COLCA1-203ENST00000532918 CEP170Q5SW79 1584 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 HAND2P61296 217 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 GPR162Q16538 588 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 MCMDC2Q4G0Z9 681 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 SLC26A6Q9BXS9 759 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 ORC3Q9UBD5 711 aaPredicted RBP12.33□□□□□ -0.44
COLCA1-203ENST00000532918 MAP3K19Q56UN5 1328 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 ANKRD62A6NC57 917 aa12.33□□□□□ -0.44
COLCA1-203ENST00000532918 DPP8Q6V1X1 898 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms