RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 BMP2KLQ5H9B9 411 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 TMEM67Q5HYA8 995 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 PA2G4Q9UQ80 394 aaKnown RBP10.11□□□□□ -0.79
CTNND1-232ENST00000532649 CYP7A1P22680 504 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 POLD1P28340 1107 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 ATP8B2P98198 1209 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 NUP62CLQ9H1M0 184 aa10.11□□□□□ -0.79
CTNND1-232ENST00000532649 VAMP4O75379 141 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 CCDC144CPQ8IYA2 1237 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 SSX2IPQ9Y2D8 614 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 ANKRD44Q8N8A2 993 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 LIMCH1Q9UPQ0 1083 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 ZGPATQ8N5A5 531 aaKnown RBP10.1□□□□□ -0.79
CTNND1-232ENST00000532649 CCNL1Q9UK58 526 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-232ENST00000532649 CBFA2T2O43439 604 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 IL13P35225 146 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 NLRP5P59047 1200 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 ZNF804AQ7Z570 1209 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 SPC24Q8NBT2 197 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 FERMT2Q96AC1 680 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 KAT14Q9H8E8 782 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 NUCB1Q02818 461 aa10.1□□□□□ -0.79
CTNND1-232ENST00000532649 HDAC1Q13547 482 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-232ENST00000532649 ZNF790Q6PG37 636 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 PHAXQ9H814 394 aaKnown RBP10.09□□□□□ -0.79
CTNND1-232ENST00000532649 MRPS9P82933 396 aaKnown RBP10.09□□□□□ -0.79
CTNND1-232ENST00000532649 NCOA7Q8NI08 942 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 HDAC9Q9UKV0 1011 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
CTNND1-232ENST00000532649 VAT1LQ9HCJ6 419 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 ERLIN1O75477 346 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 EIF3JO75822 258 aaKnown RBP10.09□□□□□ -0.79
CTNND1-232ENST00000532649 MICU3Q86XE3 530 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 DHX37Q8IY37 1157 aaKnown RBP10.09□□□□□ -0.79
CTNND1-232ENST00000532649 PSMD1Q99460 953 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 NSFL1CQ9UNZ2 370 aaKnown RBP10.09□□□□□ -0.79
CTNND1-232ENST00000532649 CCDC194A0A1B0GVG4 234 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 ZFYP08048 801 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-232ENST00000532649 KIF5BP33176 963 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 HELBQ8NG08 1087 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-232ENST00000532649 NEK1Q96PY6 1258 aa10.09□□□□□ -0.79
CTNND1-232ENST00000532649 NAA16Q6N069 864 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-232ENST00000532649 RAB11FIP4Q86YS3 637 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 EHMT1Q9H9B1 1298 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 USP21Q9UK80 565 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 PCDHB15Q9Y5E8 787 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 SLC4A4Q9Y6R1 1079 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 PER1O15534 1290 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-232ENST00000532649 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.08□□□□□ -0.8
CTNND1-232ENST00000532649 ZCCHC11Q5TAX3 1644 aaKnown RBP10.08□□□□□ -0.8
CTNND1-232ENST00000532649 GOLGA6L10A0A0M3HER8 536 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 DYDC1Q8WWB3 177 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 ZC3H12CQ9C0D7 883 aaKnown RBP10.08□□□□□ -0.8
CTNND1-232ENST00000532649 DDX21Q9NR30 783 aaKnown RBP eCLIP10.08□□□□□ -0.84e-6■□□□□ 11.2
CTNND1-232ENST00000532649 USP16Q9Y5T5 823 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 FAM193AP78312 1265 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 FAM43AQ8N2R8 423 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 HMG20BQ9P0W2 317 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 SAMD9LQ8IVG5 1584 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 PDE1AP54750 535 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 PICALMQ13492 652 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 STX8Q9UNK0 236 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 TNNQ9UQP3 1299 aa10.08□□□□□ -0.8
CTNND1-232ENST00000532649 SDSP20132 328 aa10.07□□□□□ -0.8
CTNND1-232ENST00000532649 TTC37Q6PGP7 1564 aa10.07□□□□□ -0.8
CTNND1-232ENST00000532649 MAP2K1Q02750 393 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-232ENST00000532649 SLC9C2Q5TAH2 1124 aa10.07□□□□□ -0.8
CTNND1-232ENST00000532649 LGR6Q9HBX8 967 aa10.07□□□□□ -0.8
CTNND1-232ENST00000532649 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
CTNND1-232ENST00000532649 FERP16591 822 aa10.07□□□□□ -0.8
CTNND1-232ENST00000532649 IARSP41252 1262 aaKnown RBP10.07□□□□□ -0.8
CTNND1-232ENST00000532649 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
CTNND1-232ENST00000532649 METAP2P50579 478 aaKnown RBP eCLIP10.07□□□□□ -0.8
CTNND1-232ENST00000532649 ZNF397Q8NF99 534 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-232ENST00000532649 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 RIMBP2O15034 1052 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 TSPY3P0CV98 308 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 TSPY8P0CW00 308 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 CAMK4Q16566 473 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 TMEM266Q2M3C6 531 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 BICC1Q9H694 974 aaKnown RBP10.06□□□□□ -0.8
CTNND1-232ENST00000532649 SLC52A2Q9HAB3 445 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 STK32BQ9NY57 414 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 EFCAB6Q5THR3 1501 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 MCM4P33991 863 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 MTERF4Q7Z6M4 381 aaKnown RBP10.06□□□□□ -0.8
CTNND1-232ENST00000532649 RAB34Q9BZG1 259 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 MBD5Q9P267 1494 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 CNBD1Q8NA66 436 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 CCDC12Q8WUD4 166 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-232ENST00000532649 PAG1Q9NWQ8 432 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 SOS1Q07889 1333 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-232ENST00000532649 KDM5DQ9BY66 1539 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 PPFIA3O75145 1194 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 MCM5P33992 734 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 KIAA1328Q86T90 577 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 TSG101Q99816 390 aa10.06□□□□□ -0.8
CTNND1-232ENST00000532649 SCAND2PQ9GZW5 306 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms