RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 NUP98P52948 1817 aa10.18□□□□□ -0.78
TRIM49-202ENST00000532501 TNRC6CQ9HCJ0 1690 aaKnown RBP10.18□□□□□ -0.78
TRIM49-202ENST00000532501 ERFEQ4G0M1 354 aa10.17□□□□□ -0.78
TRIM49-202ENST00000532501 NPM2Q86SE8 214 aaKnown RBP10.17□□□□□ -0.78
TRIM49-202ENST00000532501 TMEM57Q8N5G2 664 aa10.17□□□□□ -0.78
TRIM49-202ENST00000532501 NRXN2Q9P2S2 1712 aa10.17□□□□□ -0.78
TRIM49-202ENST00000532501 PXDNLA1KZ92 1463 aa10.17□□□□□ -0.78
TRIM49-202ENST00000532501 RNF123Q5XPI4 1314 aa10.17□□□□□ -0.78
TRIM49-202ENST00000532501 RGL2O15211 777 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
TRIM49-202ENST00000532501 CENPBP07199 599 aaPredicted RBP10.16□□□□□ -0.78
TRIM49-202ENST00000532501 HCLS1P14317 486 aaPredicted RBP10.16□□□□□ -0.78
TRIM49-202ENST00000532501 HMGB2P26583 209 aaKnown RBP10.16□□□□□ -0.78
TRIM49-202ENST00000532501 RRP1P56182 461 aaKnown RBP10.16□□□□□ -0.78
TRIM49-202ENST00000532501 TRIM28Q13263 835 aaKnown RBP10.16□□□□□ -0.78
TRIM49-202ENST00000532501 EPHA10Q5JZY3 1008 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 NLGN2Q8NFZ4 835 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 FAM89AQ96GI7 184 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 SETDB2Q96T68 719 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 SPON1Q9HCB6 807 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 ZNF652Q9Y2D9 606 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 GCKRQ14397 625 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 ZKSCAN2Q63HK3 967 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 LINS1Q8NG48 757 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 KAZALD1Q96I82 304 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 MEIS3Q99687 375 aa10.16□□□□□ -0.78
TRIM49-202ENST00000532501 API5Q9BZZ5 524 aaKnown RBP10.16□□□□□ -0.78
TRIM49-202ENST00000532501 ANKRD36CQ5JPF3 1778 aa10.15□□□□□ -0.78
TRIM49-202ENST00000532501 AFDNP55196 1824 aaKnown RBP10.15□□□□□ -0.78
TRIM49-202ENST00000532501 IBTKQ9P2D0 1353 aaPredicted RBP10.15□□□□□ -0.79
TRIM49-202ENST00000532501 NBPF7P0C2Y1 421 aaPredicted RBP10.15□□□□□ -0.79
TRIM49-202ENST00000532501 CHRNA5P30532 468 aa10.15□□□□□ -0.79
TRIM49-202ENST00000532501 HSP90AB3PQ58FF7 597 aa10.15□□□□□ -0.79
TRIM49-202ENST00000532501 NBPF5PQ86XG9 351 aaPredicted RBP10.15□□□□□ -0.79
TRIM49-202ENST00000532501 CNBD1Q8NA66 436 aa10.15□□□□□ -0.79
TRIM49-202ENST00000532501 ARHGAP45Q92619 1136 aa10.15□□□□□ -0.79
TRIM49-202ENST00000532501 CWC25Q9NXE8 425 aaPredicted RBP10.15□□□□□ -0.79
TRIM49-202ENST00000532501 WWC3Q9ULE0 1092 aa10.15□□□□□ -0.79
TRIM49-202ENST00000532501 SUPT16HQ9Y5B9 1047 aaKnown RBP10.15□□□□□ -0.79
TRIM49-202ENST00000532501 PARP3Q9Y6F1 533 aa10.15□□□□□ -0.79
TRIM49-202ENST00000532501 KIAA1551Q9HCM1 1747 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 ANKRD31Q8N7Z5 1873 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 GOLGB1Q14789 3259 aaKnown RBP10.14□□□□□ -0.79
TRIM49-202ENST00000532501 H7C1W4 665 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 PARP10Q53GL7 1025 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 INTS3Q68E01 1043 aaKnown RBP10.14□□□□□ -0.79
TRIM49-202ENST00000532501 UBE3BQ7Z3V4 1068 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 DZIP1LQ8IYY4 767 aaKnown RBP10.14□□□□□ -0.79
TRIM49-202ENST00000532501 CCDC191Q8NCU4 936 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 SUCLG2Q96I99 432 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 UTP14AQ9BVJ6 771 aaKnown RBP10.14□□□□□ -0.79
TRIM49-202ENST00000532501 FHDC1Q9C0D6 1143 aaPredicted RBP10.14□□□□□ -0.79
TRIM49-202ENST00000532501 SRCIN1Q9C0H9 1055 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 USP44Q9H0E7 712 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 TRMT112Q9UI30 125 aaKnown RBP10.14□□□□□ -0.79
TRIM49-202ENST00000532501 COG6Q9Y2V7 657 aa10.14□□□□□ -0.79
TRIM49-202ENST00000532501 COL11A2P13942 1736 aaPredicted RBP10.13□□□□□ -0.79
TRIM49-202ENST00000532501 PCCAP05165 728 aaPredicted RBP10.13□□□□□ -0.79
TRIM49-202ENST00000532501 POLD1P28340 1107 aa10.13□□□□□ -0.79
TRIM49-202ENST00000532501 IRX6P78412 446 aaPredicted RBP10.13□□□□□ -0.79
TRIM49-202ENST00000532501 KLHL34Q8N239 644 aa10.13□□□□□ -0.79
TRIM49-202ENST00000532501 CACNA1FO60840 1977 aa10.13□□□□□ -0.79
TRIM49-202ENST00000532501 SH3TC1Q8TE82 1336 aa10.13□□□□□ -0.79
TRIM49-202ENST00000532501 GRM8O00222 908 aa10.12□□□□□ -0.79
TRIM49-202ENST00000532501 ALDH1L1O75891 902 aa10.12□□□□□ -0.79
TRIM49-202ENST00000532501 KCNA3P22001 575 aa10.12□□□□□ -0.79
TRIM49-202ENST00000532501 NEXNQ0ZGT2 675 aa10.12□□□□□ -0.79
TRIM49-202ENST00000532501 ZBTB38Q8NAP3 1195 aaPredicted RBP10.12□□□□□ -0.79
TRIM49-202ENST00000532501 CCDC85AQ96PX6 553 aaPredicted RBP10.12□□□□□ -0.79
TRIM49-202ENST00000532501 C1orf115Q9H7X2 142 aa10.12□□□□□ -0.79
TRIM49-202ENST00000532501 UTYO14607 1347 aa10.12□□□□□ -0.79
TRIM49-202ENST00000532501 N4BP2Q86UW6 1770 aaPredicted RBP10.12□□□□□ -0.79
TRIM49-202ENST00000532501 DDX60Q8IY21 1712 aaKnown RBP10.11□□□□□ -0.79
TRIM49-202ENST00000532501 RIC1Q4ADV7 1423 aa10.11□□□□□ -0.79
TRIM49-202ENST00000532501 A0A0G2JLW4 131 aa10.11□□□□□ -0.79
TRIM49-202ENST00000532501 IRS4O14654 1257 aaPredicted RBP10.11□□□□□ -0.79
TRIM49-202ENST00000532501 IPO8O15397 1037 aaKnown RBP10.11□□□□□ -0.79
TRIM49-202ENST00000532501 DPEP1P16444 411 aa10.11□□□□□ -0.79
TRIM49-202ENST00000532501 SLC10A5Q5PT55 438 aa10.11□□□□□ -0.79
TRIM49-202ENST00000532501 ANKRD44Q8N8A2 993 aa10.11□□□□□ -0.79
TRIM49-202ENST00000532501 CRBNQ96SW2 442 aa10.11□□□□□ -0.79
TRIM49-202ENST00000532501 PPP1R1BQ9UD71 204 aaPredicted RBP10.11□□□□□ -0.79
TRIM49-202ENST00000532501 KLRG2A4D1S0 409 aaPredicted RBP10.1□□□□□ -0.79
TRIM49-202ENST00000532501 CCT4P50991 539 aaKnown RBP10.1□□□□□ -0.79
TRIM49-202ENST00000532501 FOXO4P98177 505 aa10.1□□□□□ -0.79
TRIM49-202ENST00000532501 TPTE2Q6XPS3 522 aa10.1□□□□□ -0.79
TRIM49-202ENST00000532501 PPP1R42Q7Z4L9 355 aa10.1□□□□□ -0.79
TRIM49-202ENST00000532501 ITPRIPQ8IWB1 547 aa10.1□□□□□ -0.79
TRIM49-202ENST00000532501 FTSJ3Q8IY81 847 aaKnown RBP10.1□□□□□ -0.79
TRIM49-202ENST00000532501 L3MBTL3Q96JM7 780 aaPredicted RBP10.1□□□□□ -0.79
TRIM49-202ENST00000532501 SYT17Q9BSW7 474 aa10.1□□□□□ -0.79
TRIM49-202ENST00000532501 SEC31BQ9NQW1 1179 aa10.1□□□□□ -0.79
TRIM49-202ENST00000532501 CDHR2Q9BYE9 1310 aa10.1□□□□□ -0.79
TRIM49-202ENST00000532501 ZBTB7BO15156 539 aaPredicted RBP10.09□□□□□ -0.79
TRIM49-202ENST00000532501 MVPQ14764 893 aaKnown RBP10.09□□□□□ -0.79
TRIM49-202ENST00000532501 FAM161AQ3B820 660 aa10.09□□□□□ -0.79
TRIM49-202ENST00000532501 CRY2Q49AN0 593 aa10.09□□□□□ -0.79
TRIM49-202ENST00000532501 OLFM4Q6UX06 510 aa10.09□□□□□ -0.79
TRIM49-202ENST00000532501 BRIP1Q9BX63 1249 aa10.09□□□□□ -0.79
TRIM49-202ENST00000532501 NYXQ9GZU5 481 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms