RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 TFCP2Q12800 502 aa13.21□□□□□ -0.3
BRPF3-209ENST00000532330 VPS53Q5VIR6 699 aa13.21□□□□□ -0.3
BRPF3-209ENST00000532330 ARXQ96QS3 562 aa13.21□□□□□ -0.3
BRPF3-209ENST00000532330 LSG1Q9H089 658 aaKnown RBP13.21□□□□□ -0.3
BRPF3-209ENST00000532330 CCDC8Q9H0W5 538 aaPredicted RBP13.21□□□□□ -0.3
BRPF3-209ENST00000532330 ALDH8A1Q9H2A2 487 aaPredicted RBP13.21□□□□□ -0.3
BRPF3-209ENST00000532330 FRAT2O75474 233 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-209ENST00000532330 ADAMTS2O95450 1211 aa13.2□□□□□ -0.3
BRPF3-209ENST00000532330 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
BRPF3-209ENST00000532330 ZNF330Q9Y3S2 320 aaPredicted RBP13.2□□□□□ -0.3
BRPF3-209ENST00000532330 TUBGCP6Q96RT7 1819 aa13.2□□□□□ -0.3
BRPF3-209ENST00000532330 UBAP1LF5GYI3 381 aa13.2□□□□□ -0.3
BRPF3-209ENST00000532330 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
BRPF3-209ENST00000532330 NRAPQ86VF7 1730 aa13.2□□□□□ -0.3
BRPF3-209ENST00000532330 CSF1RP07333 972 aa13.2□□□□□ -0.3
BRPF3-209ENST00000532330 CUL4AQ13619 759 aa13.2□□□□□ -0.3
BRPF3-209ENST00000532330 TTC39AQ5SRH9 613 aa13.2□□□□□ -0.3
BRPF3-209ENST00000532330 CLEC4GQ6UXB4 293 aa13.19□□□□□ -0.3
BRPF3-209ENST00000532330 WDR33Q9C0J8 1336 aaKnown RBP13.19□□□□□ -0.3
BRPF3-209ENST00000532330 PALLDQ8WX93 1383 aa13.19□□□□□ -0.3
BRPF3-209ENST00000532330 IGSF3O75054 1194 aa13.19□□□□□ -0.3
BRPF3-209ENST00000532330 PDCP20941 246 aa13.19□□□□□ -0.3
BRPF3-209ENST00000532330 PRIM1P49642 420 aaKnown RBP13.19□□□□□ -0.3
BRPF3-209ENST00000532330 ZNF512BQ96KM6 892 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-209ENST00000532330 SSFA2P28290 1259 aa13.19□□□□□ -0.3
BRPF3-209ENST00000532330 MCMDC2Q4G0Z9 681 aa13.19□□□□□ -0.3
BRPF3-209ENST00000532330 KBTBD3Q8NAB2 608 aa13.19□□□□□ -0.3
BRPF3-209ENST00000532330 NEUROD6Q96NK8 337 aa13.19□□□□□ -0.3
BRPF3-209ENST00000532330 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
BRPF3-209ENST00000532330 MROH5Q6ZUA9 1318 aa13.19□□□□□ -0.3
BRPF3-209ENST00000532330 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
BRPF3-209ENST00000532330 TOGARAM1Q9Y4F4 1720 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 SH3TC1Q8TE82 1336 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 TSGA10IPQ3SY00 556 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-209ENST00000532330 NGLY1Q96IV0 654 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 IFIT1P09914 478 aaKnown RBP13.18□□□□□ -0.3
BRPF3-209ENST00000532330 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 NLRP10Q86W26 655 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 SYAP1Q96A49 352 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-209ENST00000532330 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
BRPF3-209ENST00000532330 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 NUTM2BA6NNL0 878 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-209ENST00000532330 NUTM2EB1AL46 878 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-209ENST00000532330 CCDC152Q4G0S7 254 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 TSHZ3Q63HK5 1081 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 NUTM2AQ8IVF1 878 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-209ENST00000532330 SPRYD3Q8NCJ5 442 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
BRPF3-209ENST00000532330 CTSWP56202 376 aa13.17□□□□□ -0.3
BRPF3-209ENST00000532330 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
BRPF3-209ENST00000532330 TMX3Q96JJ7 454 aa13.17□□□□□ -0.3
BRPF3-209ENST00000532330 ITGB4P16144 1822 aa13.17□□□□□ -0.3
BRPF3-209ENST00000532330 CNNM1Q9NRU3 951 aa13.17□□□□□ -0.3
BRPF3-209ENST00000532330 RTL9Q8NET4 1388 aa13.17□□□□□ -0.3
BRPF3-209ENST00000532330 IRS4O14654 1257 aaPredicted RBP13.17□□□□□ -0.3
BRPF3-209ENST00000532330 MBD3O95983 291 aa13.17□□□□□ -0.3
BRPF3-209ENST00000532330 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
BRPF3-209ENST00000532330 RC3H1Q5TC82 1133 aaKnown RBP13.17□□□□□ -0.3
BRPF3-209ENST00000532330 NYXQ9GZU5 481 aa13.17□□□□□ -0.3
BRPF3-209ENST00000532330 PAG1Q9NWQ8 432 aa13.17□□□□□ -0.3
BRPF3-209ENST00000532330 ZNF609O15014 1411 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 BLOC1S2Q6QNY1 142 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
BRPF3-209ENST00000532330 DSCC1Q9BVC3 393 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 TBC1D2BQ9UPU7 963 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 SIK1P57059 783 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 IGHMBP2P38935 993 aaKnown RBP13.16□□□□□ -0.3
BRPF3-209ENST00000532330 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
BRPF3-209ENST00000532330 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 ZNF34Q8IZ26 560 aa13.16□□□□□ -0.3
BRPF3-209ENST00000532330 TRAK2O60296 914 aa13.15□□□□□ -0.3
BRPF3-209ENST00000532330 SLC5A1P13866 664 aa13.15□□□□□ -0.3
BRPF3-209ENST00000532330 DBNLQ9UJU6 430 aaKnown RBP13.15□□□□□ -0.3
BRPF3-209ENST00000532330 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
BRPF3-209ENST00000532330 ZSWIM6Q9HCJ5 1215 aa13.15□□□□□ -0.3
BRPF3-209ENST00000532330 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.3
BRPF3-209ENST00000532330 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
BRPF3-209ENST00000532330 CNTNAP4Q9C0A0 1308 aa13.15□□□□□ -0.3
BRPF3-209ENST00000532330 RNF113AO15541 343 aaKnown RBP13.15□□□□□ -0.3
BRPF3-209ENST00000532330 ANP32BQ92688 251 aaKnown RBP13.15□□□□□ -0.3
BRPF3-209ENST00000532330 DNAJC2Q99543 621 aaKnown RBP13.15□□□□□ -0.3
BRPF3-209ENST00000532330 MED23Q9ULK4 1368 aa13.15□□□□□ -0.31
BRPF3-209ENST00000532330 ATP2B3Q16720 1220 aa13.14□□□□□ -0.31
BRPF3-209ENST00000532330 MEX3CQ5U5Q3 659 aaKnown RBP13.14□□□□□ -0.31
BRPF3-209ENST00000532330 LDHAL6AQ6ZMR3 332 aa13.14□□□□□ -0.31
BRPF3-209ENST00000532330 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
BRPF3-209ENST00000532330 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
BRPF3-209ENST00000532330 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
BRPF3-209ENST00000532330 GNL3LQ9NVN8 582 aaKnown RBP13.14□□□□□ -0.31
BRPF3-209ENST00000532330 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
BRPF3-209ENST00000532330 ATG9AQ7Z3C6 839 aa13.14□□□□□ -0.31
BRPF3-209ENST00000532330 FNBP4Q8N3X1 1017 aaPredicted RBP13.14□□□□□ -0.31
BRPF3-209ENST00000532330 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
BRPF3-209ENST00000532330 A0A0G2JS52 829 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms