RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 SLFNL1Q499Z3 407 aa18.39■□□□□ 0.53
SRPRA-206ENST00000532259 SMIM5Q71RC9 77 aa18.39■□□□□ 0.53
SRPRA-206ENST00000532259 GZF1Q9H116 711 aaPredicted RBP18.39■□□□□ 0.53
SRPRA-206ENST00000532259 EYA2O00167 538 aa18.38■□□□□ 0.53
SRPRA-206ENST00000532259 TMX3Q96JJ7 454 aa18.38■□□□□ 0.53
SRPRA-206ENST00000532259 SNX14Q9Y5W7 946 aa18.38■□□□□ 0.53
SRPRA-206ENST00000532259 IL6STP40189 918 aaPredicted RBP18.37■□□□□ 0.53
SRPRA-206ENST00000532259 COL9A3Q14050 684 aaPredicted RBP18.37■□□□□ 0.53
SRPRA-206ENST00000532259 CCDC57Q2TAC2 916 aa18.37■□□□□ 0.53
SRPRA-206ENST00000532259 FOXD4L5Q5VV16 416 aaPredicted RBP18.37■□□□□ 0.53
SRPRA-206ENST00000532259 PRPF40BQ6NWY9 871 aaKnown RBP18.37■□□□□ 0.53
SRPRA-206ENST00000532259 DDX46Q7L014 1031 aaKnown RBP18.37■□□□□ 0.53
SRPRA-206ENST00000532259 FOXD4L4Q8WXT5 416 aaPredicted RBP18.37■□□□□ 0.53
SRPRA-206ENST00000532259 ATP5JP18859 108 aa18.37■□□□□ 0.53
SRPRA-206ENST00000532259 RAB3GAP1Q15042 981 aa18.37■□□□□ 0.53
SRPRA-206ENST00000532259 RUFY2Q8WXA3 655 aa18.37■□□□□ 0.53
SRPRA-206ENST00000532259 TRMT112Q9UI30 125 aaKnown RBP18.37■□□□□ 0.53
SRPRA-206ENST00000532259 PALLDQ8WX93 1383 aa18.36■□□□□ 0.53
SRPRA-206ENST00000532259 DTNBO60941 627 aa18.36■□□□□ 0.53
SRPRA-206ENST00000532259 EIF5P55010 431 aaKnown RBP18.36■□□□□ 0.53
SRPRA-206ENST00000532259 ZNF589Q86UQ0 364 aaPredicted RBP18.36■□□□□ 0.53
SRPRA-206ENST00000532259 GREM2Q9H772 168 aa18.36■□□□□ 0.53
SRPRA-206ENST00000532259 IL15P40933 162 aaPredicted RBP18.35■□□□□ 0.53
SRPRA-206ENST00000532259 KCNJ4P48050 445 aa18.35■□□□□ 0.53
SRPRA-206ENST00000532259 ANAPC15P60006 121 aa18.35■□□□□ 0.53
SRPRA-206ENST00000532259 CCDC87Q9NVE4 849 aa18.35■□□□□ 0.53
SRPRA-206ENST00000532259 MYH14Q7Z406 1995 aaKnown RBP18.35■□□□□ 0.53
SRPRA-206ENST00000532259 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
SRPRA-206ENST00000532259 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
SRPRA-206ENST00000532259 SEC62Q99442 399 aaKnown RBP18.35■□□□□ 0.53
SRPRA-206ENST00000532259 A0A1B0GUL7 405 aa18.34■□□□□ 0.53
SRPRA-206ENST00000532259 ADCK5Q3MIX3 580 aa18.34■□□□□ 0.53
SRPRA-206ENST00000532259 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
SRPRA-206ENST00000532259 CIZ1Q9ULV3 898 aaPredicted RBP18.34■□□□□ 0.53
SRPRA-206ENST00000532259 NUP98P52948 1817 aa18.34■□□□□ 0.53
SRPRA-206ENST00000532259 IRS4O14654 1257 aaPredicted RBP18.34■□□□□ 0.53
SRPRA-206ENST00000532259 CSF1RP07333 972 aa18.34■□□□□ 0.53
SRPRA-206ENST00000532259 JCADQ9P266 1359 aa18.34■□□□□ 0.53
SRPRA-206ENST00000532259 ADORA1P30542 326 aa18.33■□□□□ 0.53
SRPRA-206ENST00000532259 TAF6LQ9Y6J9 622 aa18.33■□□□□ 0.53
SRPRA-206ENST00000532259 CASTP20810 708 aaKnown RBP18.33■□□□□ 0.52
SRPRA-206ENST00000532259 IFIT5Q13325 482 aaKnown RBP18.33■□□□□ 0.52
SRPRA-206ENST00000532259 VPS72Q15906 364 aa18.33■□□□□ 0.52
SRPRA-206ENST00000532259 CCDC129Q6ZRS4 1044 aa18.33■□□□□ 0.52
SRPRA-206ENST00000532259 CHAMP1Q96JM3 812 aa18.33■□□□□ 0.52
SRPRA-206ENST00000532259 CCDC171Q6TFL3 1326 aa18.33■□□□□ 0.52
SRPRA-206ENST00000532259 HCLS1P14317 486 aaPredicted RBP18.32■□□□□ 0.52
SRPRA-206ENST00000532259 ITGA6P23229 1130 aa18.32■□□□□ 0.52
SRPRA-206ENST00000532259 HAUS7Q99871 368 aa18.32■□□□□ 0.52
SRPRA-206ENST00000532259 PLA2G12BQ9BX93 195 aa18.32■□□□□ 0.52
SRPRA-206ENST00000532259 USP21Q9UK80 565 aa18.32■□□□□ 0.52
SRPRA-206ENST00000532259 GOLIM4O00461 696 aa18.32■□□□□ 0.52
SRPRA-206ENST00000532259 SUSD4Q5VX71 490 aa18.32■□□□□ 0.52
SRPRA-206ENST00000532259 ZNF34Q8IZ26 560 aa18.32■□□□□ 0.52
SRPRA-206ENST00000532259 RBM8AQ9Y5S9 174 aaKnown RBP18.32■□□□□ 0.52
SRPRA-206ENST00000532259 CTSWP56202 376 aa18.31■□□□□ 0.52
SRPRA-206ENST00000532259 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
SRPRA-206ENST00000532259 CEP126Q9P2H0 1117 aa18.31■□□□□ 0.52
SRPRA-206ENST00000532259 ERVV-1B6SEH8 477 aa18.31■□□□□ 0.52
SRPRA-206ENST00000532259 CIAO1O76071 339 aa18.31■□□□□ 0.52
SRPRA-206ENST00000532259 HSP90AB3PQ58FF7 597 aa18.31■□□□□ 0.52
SRPRA-206ENST00000532259 FNBP4Q8N3X1 1017 aaPredicted RBP18.31■□□□□ 0.52
SRPRA-206ENST00000532259 JAKMIP1Q96N16 626 aaKnown RBP18.31■□□□□ 0.52
SRPRA-206ENST00000532259 ZNF609O15014 1411 aa18.31■□□□□ 0.52
SRPRA-206ENST00000532259 TRAK2O60296 914 aa18.3■□□□□ 0.52
SRPRA-206ENST00000532259 HSPA1LP34931 641 aa18.3■□□□□ 0.52
SRPRA-206ENST00000532259 NECTIN1Q15223 517 aa18.3■□□□□ 0.52
SRPRA-206ENST00000532259 LINC00116Q8NCU8 138 aa18.3■□□□□ 0.52
SRPRA-206ENST00000532259 SNRKQ9NRH2 765 aa18.3■□□□□ 0.52
SRPRA-206ENST00000532259 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
SRPRA-206ENST00000532259 CDHR2Q9BYE9 1310 aa18.3■□□□□ 0.52
SRPRA-206ENST00000532259 LDHAL6AQ6ZMR3 332 aa18.29■□□□□ 0.52
SRPRA-206ENST00000532259 MAP4K1Q92918 833 aa18.29■□□□□ 0.52
SRPRA-206ENST00000532259 GBP4Q96PP9 640 aa18.29■□□□□ 0.52
SRPRA-206ENST00000532259 HIP1O00291 1037 aa18.29■□□□□ 0.52
SRPRA-206ENST00000532259 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
SRPRA-206ENST00000532259 AK2P54819 239 aa18.29■□□□□ 0.52
SRPRA-206ENST00000532259 SCARF1Q14162 830 aa18.29■□□□□ 0.52
SRPRA-206ENST00000532259 TCEANC2Q96MN5 208 aa18.29■□□□□ 0.52
SRPRA-206ENST00000532259 MED23Q9ULK4 1368 aa18.29■□□□□ 0.52
SRPRA-206ENST00000532259 GORABQ5T7V8 394 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 PI16Q6UXB8 463 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 XAGE2Q96GT9 111 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 ANKRD36CQ5JPF3 1778 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 FKBP4Q02790 459 aaKnown RBP eCLIP18.28■□□□□ 0.52
SRPRA-206ENST00000532259 CREB3L3Q68CJ9 461 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 TTC14Q96N46 770 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 GPR108Q9NPR9 543 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 PAG1Q9NWQ8 432 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 ZDHHC9Q9Y397 364 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 RIPOR2Q9Y4F9 1068 aa18.28■□□□□ 0.52
SRPRA-206ENST00000532259 SNAP23O00161 211 aa18.27■□□□□ 0.52
SRPRA-206ENST00000532259 FOXD4L6Q3SYB3 417 aaPredicted RBP18.27■□□□□ 0.52
SRPRA-206ENST00000532259 FOXD4L3Q6VB84 417 aaPredicted RBP18.27■□□□□ 0.52
SRPRA-206ENST00000532259 HELBQ8NG08 1087 aaPredicted RBP18.27■□□□□ 0.52
SRPRA-206ENST00000532259 DDX11L8A8MPP1 907 aa18.27■□□□□ 0.51
SRPRA-206ENST00000532259 TAF5LO75529 589 aa18.27■□□□□ 0.51
SRPRA-206ENST00000532259 IFIT1P09914 478 aaKnown RBP18.27■□□□□ 0.51
SRPRA-206ENST00000532259 MCM2P49736 904 aa18.27■□□□□ 0.51
SRPRA-206ENST00000532259 METTL24Q5JXM2 366 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms