RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.28
LRRK1-209ENST00000532145 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.28
LRRK1-209ENST00000532145 RFX7Q2KHR2 1363 aa16.77■□□□□ 0.28
LRRK1-209ENST00000532145 KIAA1524Q8TCG1 905 aa16.77■□□□□ 0.27
LRRK1-209ENST00000532145 ERBB3P21860 1342 aa16.77■□□□□ 0.27
LRRK1-209ENST00000532145 RFX5P48382 616 aaPredicted RBP16.76■□□□□ 0.27
LRRK1-209ENST00000532145 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
LRRK1-209ENST00000532145 RBM43Q6ZSC3 357 aaKnown RBP16.76■□□□□ 0.27
LRRK1-209ENST00000532145 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
LRRK1-209ENST00000532145 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
LRRK1-209ENST00000532145 MRVI1Q9Y6F6 885 aa16.76■□□□□ 0.27
LRRK1-209ENST00000532145 SLC39A6Q13433 755 aa16.76■□□□□ 0.27
LRRK1-209ENST00000532145 COPS6Q7L5N1 327 aa16.76■□□□□ 0.27
LRRK1-209ENST00000532145 LRP10Q7Z4F1 713 aa16.76■□□□□ 0.27
LRRK1-209ENST00000532145 COL15A1P39059 1388 aa16.76■□□□□ 0.27
LRRK1-209ENST00000532145 KDM6AO15550 1401 aaPredicted RBP16.75■□□□□ 0.27
LRRK1-209ENST00000532145 TYRO3Q06418 890 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 C17orf53Q8N3J3 647 aaPredicted RBP16.75■□□□□ 0.27
LRRK1-209ENST00000532145 KCNF1Q9H3M0 494 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 MYL6BP14649 208 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 PTPN12Q05209 780 aaKnown RBP16.75■□□□□ 0.27
LRRK1-209ENST00000532145 RABL6Q3YEC7 729 aaPredicted RBP16.75■□□□□ 0.27
LRRK1-209ENST00000532145 TNNI3KQ59H18 835 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 LEO1Q8WVC0 666 aaPredicted RBP16.75■□□□□ 0.27
LRRK1-209ENST00000532145 GTF3C6Q969F1 213 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 EDC3Q96F86 508 aaKnown RBP16.75■□□□□ 0.27
LRRK1-209ENST00000532145 SPATA32Q96LK8 384 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 MYD88Q99836 296 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 DDX19AQ9NUU7 478 aaKnown RBP16.75■□□□□ 0.27
LRRK1-209ENST00000532145 DACT1Q9NYF0 836 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 FPGT-TNNI3KV9GXZ4 949 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 C5P01031 1676 aa16.75■□□□□ 0.27
LRRK1-209ENST00000532145 GOLGA6L6A8MZA4 724 aa16.74■□□□□ 0.27
LRRK1-209ENST00000532145 CAMK4Q16566 473 aa16.74■□□□□ 0.27
LRRK1-209ENST00000532145 ANKRD13DQ6ZTN6 518 aa16.74■□□□□ 0.27
LRRK1-209ENST00000532145 NEK1Q96PY6 1258 aa16.74■□□□□ 0.27
LRRK1-209ENST00000532145 MST1RQ04912 1400 aa16.74■□□□□ 0.27
LRRK1-209ENST00000532145 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
LRRK1-209ENST00000532145 ZMYND15Q9H091 742 aa16.73■□□□□ 0.27
LRRK1-209ENST00000532145 TNMDQ9H2S6 317 aa16.73■□□□□ 0.27
LRRK1-209ENST00000532145 GOLGA6L4A6NEF3 574 aa16.73■□□□□ 0.27
LRRK1-209ENST00000532145 LMOD2Q6P5Q4 547 aa16.73■□□□□ 0.27
LRRK1-209ENST00000532145 NFATC2IPQ8NCF5 419 aa16.73■□□□□ 0.27
LRRK1-209ENST00000532145 CHMP3Q9Y3E7 222 aa16.73■□□□□ 0.27
LRRK1-209ENST00000532145 STK3Q13188 491 aa16.72■□□□□ 0.27
LRRK1-209ENST00000532145 RAPGEF4Q8WZA2 1011 aa16.72■□□□□ 0.27
LRRK1-209ENST00000532145 TFIP11Q9UBB9 837 aaKnown RBP16.72■□□□□ 0.27
LRRK1-209ENST00000532145 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
LRRK1-209ENST00000532145 PHKG2P15735 406 aa16.72■□□□□ 0.27
LRRK1-209ENST00000532145 TFCP2Q12800 502 aa16.72■□□□□ 0.27
LRRK1-209ENST00000532145 ZNF496Q96IT1 587 aaPredicted RBP16.72■□□□□ 0.27
LRRK1-209ENST00000532145 CLSTN2Q9H4D0 955 aa16.72■□□□□ 0.27
LRRK1-209ENST00000532145 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
LRRK1-209ENST00000532145 ZNF142P52746 1687 aaPredicted RBP16.72■□□□□ 0.27
LRRK1-209ENST00000532145 ZNF609O15014 1411 aa16.72■□□□□ 0.27
LRRK1-209ENST00000532145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.72■□□□□ 0.27
LRRK1-209ENST00000532145 PYCARDQ9ULZ3 195 aa16.72■□□□□ 0.27
LRRK1-209ENST00000532145 JAK2O60674 1132 aa16.71■□□□□ 0.27
LRRK1-209ENST00000532145 RESTQ13127 1097 aa16.71■□□□□ 0.27
LRRK1-209ENST00000532145 LUZP1Q86V48 1076 aa16.71■□□□□ 0.27
LRRK1-209ENST00000532145 PGBD1Q96JS3 809 aa16.71■□□□□ 0.27
LRRK1-209ENST00000532145 HAUS7Q99871 368 aa16.71■□□□□ 0.27
LRRK1-209ENST00000532145 MCMDC2Q4G0Z9 681 aa16.71■□□□□ 0.26
LRRK1-209ENST00000532145 KRT28Q7Z3Y7 464 aa16.71■□□□□ 0.26
LRRK1-209ENST00000532145 CKAP2LQ8IYA6 745 aa16.71■□□□□ 0.26
LRRK1-209ENST00000532145 SPC24Q8NBT2 197 aa16.71■□□□□ 0.26
LRRK1-209ENST00000532145 CBX8Q9HC52 389 aa16.71■□□□□ 0.26
LRRK1-209ENST00000532145 CYP21A2P08686 494 aa16.7■□□□□ 0.26
LRRK1-209ENST00000532145 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
LRRK1-209ENST00000532145 ANO6Q4KMQ2 910 aa16.7■□□□□ 0.26
LRRK1-209ENST00000532145 ZSCAN16Q9H4T2 348 aaPredicted RBP16.7■□□□□ 0.26
LRRK1-209ENST00000532145 Q6ZUG5 572 aa16.7■□□□□ 0.26
LRRK1-209ENST00000532145 USP16Q9Y5T5 823 aa16.7■□□□□ 0.26
LRRK1-209ENST00000532145 NR1I2O75469 434 aa16.69■□□□□ 0.26
LRRK1-209ENST00000532145 BRF1Q92994 677 aa16.69■□□□□ 0.26
LRRK1-209ENST00000532145 UBE3BQ7Z3V4 1068 aa16.69■□□□□ 0.26
LRRK1-209ENST00000532145 TDRD7Q8NHU6 1098 aaKnown RBP16.69■□□□□ 0.26
LRRK1-209ENST00000532145 SMARCC2Q8TAQ2 1214 aa16.69■□□□□ 0.26
LRRK1-209ENST00000532145 DBNDD2Q9BQY9 259 aa16.69■□□□□ 0.26
LRRK1-209ENST00000532145 LLPHQ9BRT6 129 aaKnown RBP16.69■□□□□ 0.26
LRRK1-209ENST00000532145 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
LRRK1-209ENST00000532145 RGPD5Q99666 1765 aa16.69■□□□□ 0.26
LRRK1-209ENST00000532145 SH3TC1Q8TE82 1336 aa16.68■□□□□ 0.26
LRRK1-209ENST00000532145 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
LRRK1-209ENST00000532145 CAVIN2O95810 425 aa16.68■□□□□ 0.26
LRRK1-209ENST00000532145 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
LRRK1-209ENST00000532145 CASP7P55210 303 aa16.68■□□□□ 0.26
LRRK1-209ENST00000532145 CCDC129Q6ZRS4 1044 aa16.68■□□□□ 0.26
LRRK1-209ENST00000532145 IFNL2Q8IZJ0 200 aa16.68■□□□□ 0.26
LRRK1-209ENST00000532145 SEC62Q99442 399 aaKnown RBP16.68■□□□□ 0.26
LRRK1-209ENST00000532145 CFAP45Q9UL16 551 aa16.68■□□□□ 0.26
LRRK1-209ENST00000532145 NDUFB9Q9Y6M9 179 aa16.68■□□□□ 0.26
LRRK1-209ENST00000532145 ABCC6O95255 1503 aa16.68■□□□□ 0.26
LRRK1-209ENST00000532145 CHGBP05060 677 aa16.67■□□□□ 0.26
LRRK1-209ENST00000532145 HMGB1P09429 215 aaKnown RBP16.67■□□□□ 0.26
LRRK1-209ENST00000532145 PLA2G4DQ86XP0 818 aa16.67■□□□□ 0.26
LRRK1-209ENST00000532145 TICAM2Q86XR7 235 aa16.67■□□□□ 0.26
LRRK1-209ENST00000532145 ZNF710Q8N1W2 664 aa16.67■□□□□ 0.26
LRRK1-209ENST00000532145 KBTBD3Q8NAB2 608 aa16.67■□□□□ 0.26
LRRK1-209ENST00000532145 JARID2Q92833 1246 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms