RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 HPS1Q92902 700 aa5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 MRGPRX2Q96LB1 330 aa5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 RNPC3Q96LT9 517 aaKnown RBP5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 PRDM9Q9NQV7 894 aa5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 GEMIN8Q9NWZ8 242 aaKnown RBP5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 CHPF2Q9P2E5 772 aa5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 FAN1Q9Y2M0 1017 aa5.96□□□□□ -1.46
AC055878.1-201ENST00000531858 H3BM21 787 aa5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 EIF3JO75822 258 aaKnown RBP5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 PLEKHG6Q3KR16 790 aa5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 ATCAYQ86WG3 371 aa5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 MORC4Q8TE76 937 aa5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 SRPK1Q96SB4 655 aaKnown RBP5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 RSRP1Q9BUV0 290 aa5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 TRIM55Q9BYV6 548 aa5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 ETNK1Q9HBU6 452 aa5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 SLC52A1Q9NWF4 448 aa5.95□□□□□ -1.46
AC055878.1-201ENST00000531858 CCDC194A0A1B0GVG4 234 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 RLBP1P12271 317 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 TRIM32Q13049 653 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 ORC1Q13415 861 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 RAB33AQ14088 237 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 TEAD4Q15561 434 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 HIF1AQ16665 826 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 ETFBKMTQ8IXQ9 262 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 CCDC136Q96JN2 1154 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 SPON2Q9BUD6 331 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 ZNF408Q9H9D4 720 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 NEUROD4Q9HD90 331 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 DDX56Q9NY93 547 aaKnown RBP5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 SERTAD1Q9UHV2 236 aa5.94□□□□□ -1.46
AC055878.1-201ENST00000531858 SERTM1A2A2V5 107 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 OPLAHO14841 1288 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 CDC45O75419 566 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 S100BP04271 92 aaPredicted RBP5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 VARSP26640 1264 aaKnown RBP5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 VEGFBP49765 207 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 C1orf53Q5VUE5 145 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 XKR5Q6UX68 686 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 KIAA0825Q8IV33 1275 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 EXOC8Q8IYI6 725 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 APPBP2Q92624 585 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 IFT43Q96FT9 208 aa5.93□□□□□ -1.46
AC055878.1-201ENST00000531858 EML1O00423 815 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 KLF4O43474 513 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 SOX9P48436 509 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 KCNMA1Q12791 1236 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 LINC01559Q495D7 138 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 ANKS3Q6ZW76 656 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 VASH1Q7L8A9 365 aaPredicted RBP5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 SMC5Q8IY18 1101 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 RPUSD2Q8IZ73 545 aaKnown RBP5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 TRPM4Q8TD43 1214 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 ANKRD24Q8TF21 1146 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 RELTQ969Z4 430 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 CCDC74AQ96AQ1 378 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 XAGE2Q96GT9 111 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 DEPDC7Q96QD5 511 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 OSBPL7Q9BZF2 842 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 CCDC113Q9H0I3 377 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 SNTG2Q9NY99 539 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 ERBB4Q15303 1308 aa5.92□□□□□ -1.46
AC055878.1-201ENST00000531858 USP17L7P0C7H9 530 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 CHMP4BP1P59074 171 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 RAB15P59190 212 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 DGKZQ13574 1117 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 RASA3Q14644 834 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 FAM26DQ5JW98 314 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 MEI1Q5TIA1 1274 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 KIAA0907Q7Z7F0 614 aaPredicted RBP5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 HOMER1Q86YM7 354 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 ALDH16A1Q8IZ83 802 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 NUDT16Q96DE0 195 aaKnown RBP5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 PRKAG3Q9UGI9 489 aa5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 R3HCC1Q9Y3T6 440 aaKnown RBP5.91□□□□□ -1.46
AC055878.1-201ENST00000531858 NOS2P35228 1153 aa5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 NASPP49321 788 aaPredicted RBP5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 SH3BP2P78314 561 aa5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 C8orf34Q49A92 452 aa5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 TNNI3KQ59H18 835 aa5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 RELL1Q8IUW5 271 aa5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 SNX29Q8TEQ0 813 aa5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 NT5C1AQ9BXI3 368 aa5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 KCNQ5Q9NR82 932 aa5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 FNDC3AQ9Y2H6 1198 aaKnown RBP5.9□□□□□ -1.46
AC055878.1-201ENST00000531858 PDGFRBP09619 1106 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 BMP1P13497 986 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 GSTT1P30711 240 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 AMPD3Q01432 767 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 PDE12Q6L8Q7 609 aaKnown RBP5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 TREML1Q86YW5 311 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 SYNPOQ8N3V7 929 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 MPNDQ8N594 471 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 GPR152Q8TDT2 470 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 GGNBP2Q9H3C7 697 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 KBTBD4Q9NVX7 518 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 PPP4R2Q9NY27 417 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 MSRB2Q9Y3D2 182 aa5.89□□□□□ -1.47
AC055878.1-201ENST00000531858 HMGB1P1B2RPK0 211 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms