RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 BRIP1Q9BX63 1249 aa30.89■■■□□ 2.54
ME3-209ENST00000530520 SPON1Q9HCB6 807 aa30.89■■■□□ 2.54
ME3-209ENST00000530520 CCDC152Q4G0S7 254 aa30.88■■■□□ 2.53
ME3-209ENST00000530520 HMMRO75330 724 aa30.88■■■□□ 2.53
ME3-209ENST00000530520 FAM161AQ3B820 660 aa30.88■■■□□ 2.53
ME3-209ENST00000530520 SIRT2Q8IXJ6 389 aa30.88■■■□□ 2.53
ME3-209ENST00000530520 SGIP1Q9BQI5 828 aa30.88■■■□□ 2.53
ME3-209ENST00000530520 C10orf71Q711Q0 1435 aa30.87■■■□□ 2.53
ME3-209ENST00000530520 SF3B3Q15393 1217 aaKnown RBP30.87■■■□□ 2.53
ME3-209ENST00000530520 PPP4R2Q9NY27 417 aa30.87■■■□□ 2.53
ME3-209ENST00000530520 PTGER2P43116 358 aa30.86■■■□□ 2.53
ME3-209ENST00000530520 GREM2Q9H772 168 aa30.86■■■□□ 2.53
ME3-209ENST00000530520 PDE6BP35913 854 aa30.85■■■□□ 2.53
ME3-209ENST00000530520 CCDC57Q2TAC2 916 aa30.85■■■□□ 2.53
ME3-209ENST00000530520 KIF13BQ9NQT8 1826 aa30.85■■■□□ 2.53
ME3-209ENST00000530520 IFIT5Q13325 482 aaKnown RBP30.84■■■□□ 2.53
ME3-209ENST00000530520 SSH3Q8TE77 659 aa30.84■■■□□ 2.53
ME3-209ENST00000530520 CCDC136Q96JN2 1154 aa30.83■■■□□ 2.53
ME3-209ENST00000530520 COL11A2P13942 1736 aaPredicted RBP30.83■■■□□ 2.53
ME3-209ENST00000530520 ITGA6P23229 1130 aa30.83■■■□□ 2.53
ME3-209ENST00000530520 POLA2Q14181 598 aa30.83■■■□□ 2.53
ME3-209ENST00000530520 RPGRQ92834 1020 aaKnown RBP30.83■■■□□ 2.53
ME3-209ENST00000530520 RWDD1Q9H446 243 aaPredicted RBP30.83■■■□□ 2.53
ME3-209ENST00000530520 RTL9Q8NET4 1388 aa30.82■■■□□ 2.52
ME3-209ENST00000530520 ANKRD18BA2A2Z9 1011 aa30.82■■■□□ 2.52
ME3-209ENST00000530520 CRY2Q49AN0 593 aa30.82■■■□□ 2.52
ME3-209ENST00000530520 TAF1P21675 1872 aa30.82■■■□□ 2.52
ME3-209ENST00000530520 HDAC1Q13547 482 aaPredicted RBP30.81■■■□□ 2.52
ME3-209ENST00000530520 SPEF2Q9C093 1822 aa30.81■■■□□ 2.52
ME3-209ENST00000530520 KLRG2A4D1S0 409 aaPredicted RBP30.8■■■□□ 2.52
ME3-209ENST00000530520 TAF7LQ5H9L4 462 aa30.8■■■□□ 2.52
ME3-209ENST00000530520 DDX46Q7L014 1031 aaKnown RBP30.79■■■□□ 2.52
ME3-209ENST00000530520 SEC31BQ9NQW1 1179 aa30.79■■■□□ 2.52
ME3-209ENST00000530520 RFX5P48382 616 aaPredicted RBP30.79■■■□□ 2.52
ME3-209ENST00000530520 KLHL34Q8N239 644 aa30.79■■■□□ 2.52
ME3-209ENST00000530520 B4GALNT3Q6L9W6 998 aa30.78■■■□□ 2.52
ME3-209ENST00000530520 C2CD5Q86YS7 1000 aa30.78■■■□□ 2.52
ME3-209ENST00000530520 KLHDC4Q8TBB5 520 aa30.78■■■□□ 2.52
ME3-209ENST00000530520 PPP1R1BQ9UD71 204 aaPredicted RBP30.78■■■□□ 2.52
ME3-209ENST00000530520 IGHDP01880 384 aa30.77■■■□□ 2.52
ME3-209ENST00000530520 CDC5LQ99459 802 aaKnown RBP30.77■■■□□ 2.52
ME3-209ENST00000530520 PA2G4Q9UQ80 394 aaKnown RBP30.77■■■□□ 2.52
ME3-209ENST00000530520 H0YIN7 160 aa30.76■■■□□ 2.52
ME3-209ENST00000530520 SRGNP10124 158 aa30.76■■■□□ 2.52
ME3-209ENST00000530520 PTPN12Q05209 780 aaKnown RBP30.76■■■□□ 2.52
ME3-209ENST00000530520 RBM17Q96I25 401 aaKnown RBP30.76■■■□□ 2.52
ME3-209ENST00000530520 ZNF594Q96JF6 807 aaPredicted RBP30.76■■■□□ 2.52
ME3-209ENST00000530520 PDZRN3Q9UPQ7 1066 aa30.76■■■□□ 2.52
ME3-209ENST00000530520 DLEC1Q9Y238 1755 aa30.75■■■□□ 2.51
ME3-209ENST00000530520 SURF6O75683 361 aaKnown RBP30.75■■■□□ 2.51
ME3-209ENST00000530520 NPR1P16066 1061 aa30.75■■■□□ 2.51
ME3-209ENST00000530520 SIL1Q9H173 461 aa30.75■■■□□ 2.51
ME3-209ENST00000530520 COPRSQ9NQ92 184 aa30.75■■■□□ 2.51
ME3-209ENST00000530520 CACNA1SQ13698 1873 aa30.74■■■□□ 2.51
ME3-209ENST00000530520 COL4A1P02462 1669 aa30.74■■■□□ 2.51
ME3-209ENST00000530520 CHRNA5P30532 468 aa30.74■■■□□ 2.51
ME3-209ENST00000530520 ANKRD18AQ8IVF6 992 aa30.74■■■□□ 2.51
ME3-209ENST00000530520 MASTLQ96GX5 879 aa30.74■■■□□ 2.51
ME3-209ENST00000530520 HOXA10P31260 410 aaPredicted RBP30.73■■■□□ 2.51
ME3-209ENST00000530520 IGHMBP2P38935 993 aaKnown RBP30.73■■■□□ 2.51
ME3-209ENST00000530520 EXOC6BQ9Y2D4 811 aa30.73■■■□□ 2.51
ME3-209ENST00000530520 LRP5O75197 1615 aa30.72■■■□□ 2.51
ME3-209ENST00000530520 GRAPQ13588 217 aa30.72■■■□□ 2.51
ME3-209ENST00000530520 GRAPLQ8TC17 118 aaPredicted RBP30.72■■■□□ 2.51
ME3-209ENST00000530520 CELF1Q92879 486 aaKnown RBP30.72■■■□□ 2.51
ME3-209ENST00000530520 ZNF622Q969S3 477 aaKnown RBP eCLIP30.72■■■□□ 2.51
ME3-209ENST00000530520 OS9Q13438 667 aaPredicted RBP30.71■■■□□ 2.51
ME3-209ENST00000530520 CRAMP1Q96RY5 1269 aa30.71■■■□□ 2.51
ME3-209ENST00000530520 MPHOSPH8Q99549 860 aa30.71■■■□□ 2.51
ME3-209ENST00000530520 DCTPP1Q9H773 170 aa30.71■■■□□ 2.51
ME3-209ENST00000530520 CD2APQ9Y5K6 639 aa30.71■■■□□ 2.51
ME3-209ENST00000530520 KIAA1551Q9HCM1 1747 aa30.71■■■□□ 2.51
ME3-209ENST00000530520 LDHAL6AQ6ZMR3 332 aa30.71■■■□□ 2.51
ME3-209ENST00000530520 RPS8P62241 208 aaKnown RBP30.7■■■□□ 2.5
ME3-209ENST00000530520 G3BP1Q13283 466 aaKnown RBP eCLIP30.7■■■□□ 2.5
ME3-209ENST00000530520 STYK1Q6J9G0 422 aa30.7■■■□□ 2.5
ME3-209ENST00000530520 NOP58Q9Y2X3 529 aaKnown RBP30.7■■■□□ 2.5
ME3-209ENST00000530520 TGFB2P61812 414 aa30.69■■■□□ 2.5
ME3-209ENST00000530520 HSP90AB4PQ58FF6 505 aa30.69■■■□□ 2.5
ME3-209ENST00000530520 GCC1Q96CN9 775 aa30.69■■■□□ 2.5
ME3-209ENST00000530520 CNNM1Q9NRU3 951 aa30.69■■■□□ 2.5
ME3-209ENST00000530520 EYA2O00167 538 aa30.68■■■□□ 2.5
ME3-209ENST00000530520 ALDH1B1P30837 517 aa30.68■■■□□ 2.5
ME3-209ENST00000530520 PUS3Q9BZE2 481 aaKnown RBP30.68■■■□□ 2.5
ME3-209ENST00000530520 A0A0G2JLW4 131 aa30.67■■■□□ 2.5
ME3-209ENST00000530520 APBB1O00213 710 aa30.67■■■□□ 2.5
ME3-209ENST00000530520 DPEP1P16444 411 aa30.67■■■□□ 2.5
ME3-209ENST00000530520 LRRC24Q50LG9 513 aa30.67■■■□□ 2.5
ME3-209ENST00000530520 CENPQQ7L2Z9 268 aaPredicted RBP30.67■■■□□ 2.5
ME3-209ENST00000530520 FBXO3Q9UK99 471 aa30.67■■■□□ 2.5
ME3-209ENST00000530520 KDM2BQ8NHM5 1336 aa30.66■■■□□ 2.5
ME3-209ENST00000530520 CIAO1O76071 339 aa30.66■■■□□ 2.5
ME3-209ENST00000530520 SMC5Q8IY18 1101 aa30.65■■■□□ 2.5
ME3-209ENST00000530520 CNKSR1Q969H4 720 aa30.65■■■□□ 2.5
ME3-209ENST00000530520 BSDC1Q9NW68 430 aaPredicted RBP30.65■■■□□ 2.5
ME3-209ENST00000530520 RAB11FIP3O75154 756 aa30.64■■■□□ 2.5
ME3-209ENST00000530520 ATG9AQ7Z3C6 839 aa30.64■■■□□ 2.5
ME3-209ENST00000530520 BBOX1O75936 387 aa30.63■■■□□ 2.49
ME3-209ENST00000530520 IL15P40933 162 aaPredicted RBP30.63■■■□□ 2.49
ME3-209ENST00000530520 ERC1Q8IUD2 1116 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms