RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 SSH3Q8TE77 659 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 MLH3Q9UHC1 1453 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 FAM135BQ49AJ0 1406 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 MNS1Q8NEH6 495 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 RAD50Q92878 1312 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 TET3O43151 1660 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 SLC27A2O14975 620 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 SKIDA1Q1XH10 827 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 MCMDC2Q4G0Z9 681 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 CCDC112Q8NEF3 446 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 ZKSCAN5Q9Y2L8 839 aa14.47□□□□□ -0.09
SCN3B-206ENST00000530277 LARGE1O95461 756 aa14.46□□□□□ -0.09
SCN3B-206ENST00000530277 HSPA4P34932 840 aa14.46□□□□□ -0.09
SCN3B-206ENST00000530277 ATP2B2Q01814 1243 aa14.46□□□□□ -0.09
SCN3B-206ENST00000530277 PAG1Q9NWQ8 432 aa14.46□□□□□ -0.09
SCN3B-206ENST00000530277 PTGS1P23219 599 aa14.46□□□□□ -0.09
SCN3B-206ENST00000530277 CTNNA3Q9UI47 895 aa14.46□□□□□ -0.09
SCN3B-206ENST00000530277 TPM3P06753 285 aa14.46□□□□□ -0.1
SCN3B-206ENST00000530277 SLC9C2Q5TAH2 1124 aa14.46□□□□□ -0.1
SCN3B-206ENST00000530277 CCDC24Q8N4L8 307 aa14.46□□□□□ -0.1
SCN3B-206ENST00000530277 ZKSCAN3Q9BRR0 538 aa14.46□□□□□ -0.1
SCN3B-206ENST00000530277 UBAC1Q9BSL1 405 aa14.46□□□□□ -0.1
SCN3B-206ENST00000530277 SPHKAPQ2M3C7 1700 aa14.45□□□□□ -0.1
SCN3B-206ENST00000530277 IFIT3O14879 490 aaKnown RBP14.45□□□□□ -0.1
SCN3B-206ENST00000530277 RANBP6O60518 1105 aaKnown RBP14.45□□□□□ -0.1
SCN3B-206ENST00000530277 TTLL7Q6ZT98 887 aa14.45□□□□□ -0.1
SCN3B-206ENST00000530277 DHX8Q14562 1220 aaKnown RBP14.45□□□□□ -0.1
SCN3B-206ENST00000530277 CPLX3Q8WVH0 158 aa14.45□□□□□ -0.1
SCN3B-206ENST00000530277 BRD1O95696 1058 aa14.45□□□□□ -0.1
SCN3B-206ENST00000530277 CHGBP05060 677 aa14.44□□□□□ -0.1
SCN3B-206ENST00000530277 GCKRQ14397 625 aa14.44□□□□□ -0.1
SCN3B-206ENST00000530277 TRIM22Q8IYM9 498 aa14.44□□□□□ -0.1
SCN3B-206ENST00000530277 MIGA1Q8NAN2 632 aa14.44□□□□□ -0.1
SCN3B-206ENST00000530277 TULP4Q9NRJ4 1543 aa14.44□□□□□ -0.1
SCN3B-206ENST00000530277 TYRO3Q06418 890 aa14.44□□□□□ -0.1
SCN3B-206ENST00000530277 HMGN5P82970 282 aaKnown RBP14.44□□□□□ -0.1
SCN3B-206ENST00000530277 NOLC1Q14978 699 aaKnown RBP eCLIP14.44□□□□□ -0.1
SCN3B-206ENST00000530277 TPCN1Q9ULQ1 816 aa14.44□□□□□ -0.1
SCN3B-206ENST00000530277 KIAA0232Q92628 1395 aa14.44□□□□□ -0.1
SCN3B-206ENST00000530277 TTC41PQ6P2S7 1318 aa14.44□□□□□ -0.1
SCN3B-206ENST00000530277 A0A1B0GUL7 405 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 A0A1B0GVL5 298 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 TNNI3KQ59H18 835 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 MYL10Q9BUA6 226 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 FPGT-TNNI3KV9GXZ4 949 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 ERBB4Q15303 1308 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 PTPDC1A2A3K4 754 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 TNNT1P13805 278 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 ATP2B3Q16720 1220 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 INTS4Q96HW7 963 aaKnown RBP14.43□□□□□ -0.1
SCN3B-206ENST00000530277 SLC26A6Q9BXS9 759 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 NACAP1Q9BZK3 213 aa14.43□□□□□ -0.1
SCN3B-206ENST00000530277 IBTKQ9P2D0 1353 aaPredicted RBP14.43□□□□□ -0.1
SCN3B-206ENST00000530277 FSD2A1L4K1 749 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 C19orf44Q9H6X5 657 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 GLI2P10070 1586 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 IGSF1Q8N6C5 1336 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 ANKRD18BA2A2Z9 1011 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 LIG1P18858 919 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 ZNF589Q86UQ0 364 aaPredicted RBP14.42□□□□□ -0.1
SCN3B-206ENST00000530277 NEO1Q92859 1461 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 LMOD1P29536 600 aaPredicted RBP14.42□□□□□ -0.1
SCN3B-206ENST00000530277 IL25Q9H293 177 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 AKAP2Q9Y2D5 859 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 CEP152O94986 1710 aa14.42□□□□□ -0.1
SCN3B-206ENST00000530277 GOLGA8AA7E2F4 631 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 TMEM67Q5HYA8 995 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 NOL10Q9BSC4 688 aaKnown RBP14.41□□□□□ -0.1
SCN3B-206ENST00000530277 AXIN2Q9Y2T1 843 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 USP6P35125 1406 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 TMC6Q7Z403 805 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 NEURL1BA8MQ27 555 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 CADPS2Q86UW7 1296 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 AOPEPQ8N6M6 819 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 FTOQ9C0B1 505 aaKnown RBP eCLIP14.41□□□□□ -0.1
SCN3B-206ENST00000530277 LRRC7Q96NW7 1537 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 PRC1O43663 620 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 IGHMBP2P38935 993 aaKnown RBP14.41□□□□□ -0.1
SCN3B-206ENST00000530277 TSR1Q2NL82 804 aaKnown RBP14.41□□□□□ -0.1
SCN3B-206ENST00000530277 LRRC24Q50LG9 513 aa14.41□□□□□ -0.1
SCN3B-206ENST00000530277 METTL22Q9BUU2 404 aaPredicted RBP14.41□□□□□ -0.1
SCN3B-206ENST00000530277 SPECC1Q5M775 1068 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 ZSWIM4Q9H7M6 989 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 SLC52A2Q9HAB3 445 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 HOOK1Q9UJC3 728 aaKnown RBP14.4□□□□□ -0.1
SCN3B-206ENST00000530277 SLC12A7Q9Y666 1083 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 TAF5LO75529 589 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 SLC3A2P08195 630 aaKnown RBP14.4□□□□□ -0.1
SCN3B-206ENST00000530277 TPM1P09493 284 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 PDCL2Q8N4E4 241 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 PUS3Q9BZE2 481 aaKnown RBP14.4□□□□□ -0.1
SCN3B-206ENST00000530277 DDX19AQ9NUU7 478 aaKnown RBP14.4□□□□□ -0.1
SCN3B-206ENST00000530277 METAP2P50579 478 aaKnown RBP eCLIP14.4□□□□□ -0.1
SCN3B-206ENST00000530277 ZNF445P59923 1031 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
SCN3B-206ENST00000530277 PI16Q6UXB8 463 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 DNAJC10Q8IXB1 793 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 FAM200AQ8TCP9 573 aa14.4□□□□□ -0.1
SCN3B-206ENST00000530277 AATKQ6ZMQ8 1374 aa14.39□□□□□ -0.11
SCN3B-206ENST00000530277 RPS6KB1P23443 525 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms