RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 RAD17O75943 681 aa13.8□□□□□ -0.2
COPB1-207ENST00000529866 C3orf67Q6ZVT6 689 aa13.8□□□□□ -0.2
COPB1-207ENST00000529866 SLC51AQ86UW1 340 aa13.8□□□□□ -0.2
COPB1-207ENST00000529866 MPNDQ8N594 471 aa13.8□□□□□ -0.2
COPB1-207ENST00000529866 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
COPB1-207ENST00000529866 EIF4A1P60842 406 aaKnown RBP13.79□□□□□ -0.2
COPB1-207ENST00000529866 RGMBQ6NW40 437 aa13.79□□□□□ -0.2
COPB1-207ENST00000529866 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
COPB1-207ENST00000529866 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
COPB1-207ENST00000529866 HIRAP54198 1017 aaPredicted RBP13.78□□□□□ -0.2
COPB1-207ENST00000529866 SLC10A5Q5PT55 438 aa13.78□□□□□ -0.2
COPB1-207ENST00000529866 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
COPB1-207ENST00000529866 USP48Q86UV5 1035 aa13.78□□□□□ -0.2
COPB1-207ENST00000529866 SP8Q8IXZ3 490 aa13.78□□□□□ -0.2
COPB1-207ENST00000529866 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
COPB1-207ENST00000529866 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
COPB1-207ENST00000529866 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
COPB1-207ENST00000529866 SOX10P56693 466 aa13.77□□□□□ -0.21
COPB1-207ENST00000529866 HSP90AB3PQ58FF7 597 aa13.77□□□□□ -0.21
COPB1-207ENST00000529866 PRPF38BQ5VTL8 546 aaKnown RBP13.77□□□□□ -0.21
COPB1-207ENST00000529866 KRT26Q7Z3Y9 468 aa13.77□□□□□ -0.21
COPB1-207ENST00000529866 TMC4Q7Z404 712 aa13.77□□□□□ -0.21
COPB1-207ENST00000529866 ZIC5Q96T25 663 aa13.77□□□□□ -0.21
COPB1-207ENST00000529866 GBA2Q9HCG7 927 aaPredicted RBP13.77□□□□□ -0.21
COPB1-207ENST00000529866 GRAPQ13588 217 aa13.76□□□□□ -0.21
COPB1-207ENST00000529866 GRAPLQ8TC17 118 aaPredicted RBP13.76□□□□□ -0.21
COPB1-207ENST00000529866 DPF2Q92785 391 aa13.76□□□□□ -0.21
COPB1-207ENST00000529866 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
COPB1-207ENST00000529866 ZNF157P51786 506 aaPredicted RBP13.75□□□□□ -0.21
COPB1-207ENST00000529866 DCPSQ96C86 337 aaKnown RBP13.75□□□□□ -0.21
COPB1-207ENST00000529866 CASP8AP2Q9UKL3 1982 aa13.74□□□□□ -0.21
COPB1-207ENST00000529866 YDJCA8MPS7 323 aa13.74□□□□□ -0.21
COPB1-207ENST00000529866 FAM155AB1AL88 458 aaPredicted RBP13.74□□□□□ -0.21
COPB1-207ENST00000529866 TRPA1O75762 1119 aa13.74□□□□□ -0.21
COPB1-207ENST00000529866 RPS12P25398 132 aaKnown RBP13.74□□□□□ -0.21
COPB1-207ENST00000529866 KIF23Q02241 960 aaPredicted RBP13.74□□□□□ -0.21
COPB1-207ENST00000529866 CTU1Q7Z7A3 348 aaKnown RBP13.74□□□□□ -0.21
COPB1-207ENST00000529866 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
COPB1-207ENST00000529866 SH3TC1Q8TE82 1336 aa13.73□□□□□ -0.21
COPB1-207ENST00000529866 SHTN1A0MZ66 631 aa13.73□□□□□ -0.21
COPB1-207ENST00000529866 PSMD14O00487 310 aa13.73□□□□□ -0.21
COPB1-207ENST00000529866 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
COPB1-207ENST00000529866 WASHC4Q2M389 1173 aa13.73□□□□□ -0.21
COPB1-207ENST00000529866 TBC1D10BQ4KMP7 808 aaPredicted RBP13.73□□□□□ -0.21
COPB1-207ENST00000529866 SAMD7Q7Z3H4 446 aa13.73□□□□□ -0.21
COPB1-207ENST00000529866 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
COPB1-207ENST00000529866 RNF186Q9NXI6 227 aa13.73□□□□□ -0.21
COPB1-207ENST00000529866 SLC10A3P09131 477 aa13.72□□□□□ -0.21
COPB1-207ENST00000529866 SULF1Q8IWU6 871 aa13.72□□□□□ -0.21
COPB1-207ENST00000529866 TRMT112Q9UI30 125 aaKnown RBP13.72□□□□□ -0.21
COPB1-207ENST00000529866 TSPYL4Q9UJ04 414 aa13.72□□□□□ -0.21
COPB1-207ENST00000529866 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.21
COPB1-207ENST00000529866 NUP98P52948 1817 aa13.71□□□□□ -0.21
COPB1-207ENST00000529866 MAPK8IP3Q9UPT6 1336 aa13.71□□□□□ -0.21
COPB1-207ENST00000529866 ADM5C9JUS6 153 aa13.71□□□□□ -0.21
COPB1-207ENST00000529866 EIF2S2P20042 333 aaKnown RBP13.71□□□□□ -0.21
COPB1-207ENST00000529866 NFE2L2Q16236 605 aa13.71□□□□□ -0.21
COPB1-207ENST00000529866 NLRP10Q86W26 655 aa13.71□□□□□ -0.21
COPB1-207ENST00000529866 EYA3Q99504 573 aa13.71□□□□□ -0.21
COPB1-207ENST00000529866 THUMPD2Q9BTF0 503 aaKnown RBP13.71□□□□□ -0.21
COPB1-207ENST00000529866 PNNQ9H307 717 aaKnown RBP13.71□□□□□ -0.21
COPB1-207ENST00000529866 DBNDD1Q9H9R9 158 aa13.71□□□□□ -0.21
COPB1-207ENST00000529866 PKN2Q16513 984 aaKnown RBP13.7□□□□□ -0.22
COPB1-207ENST00000529866 KIF4BQ2VIQ3 1234 aa13.7□□□□□ -0.22
COPB1-207ENST00000529866 RBM26Q5T8P6 1007 aaKnown RBP13.7□□□□□ -0.22
COPB1-207ENST00000529866 DLK2Q6UY11 383 aa13.7□□□□□ -0.22
COPB1-207ENST00000529866 LRP10Q7Z4F1 713 aa13.7□□□□□ -0.22
COPB1-207ENST00000529866 GGA3Q9NZ52 723 aa13.7□□□□□ -0.22
COPB1-207ENST00000529866 NSFL1CQ9UNZ2 370 aaKnown RBP13.7□□□□□ -0.22
COPB1-207ENST00000529866 KDM3BQ7LBC6 1761 aa13.69□□□□□ -0.22
COPB1-207ENST00000529866 C6orf229H3BNL8 230 aa13.69□□□□□ -0.22
COPB1-207ENST00000529866 EGFRP00533 1210 aa13.69□□□□□ -0.22
COPB1-207ENST00000529866 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
COPB1-207ENST00000529866 PDIA6Q15084 440 aa13.69□□□□□ -0.22
COPB1-207ENST00000529866 CSRNP1Q96S65 589 aa13.69□□□□□ -0.22
COPB1-207ENST00000529866 ECE2O60344 883 aa13.68□□□□□ -0.22
COPB1-207ENST00000529866 FKBP1BP68106 108 aa13.68□□□□□ -0.22
COPB1-207ENST00000529866 AIMP1Q12904 312 aaKnown RBP13.68□□□□□ -0.22
COPB1-207ENST00000529866 PROSER3Q2NL68 480 aa13.68□□□□□ -0.22
COPB1-207ENST00000529866 COPS6Q7L5N1 327 aa13.68□□□□□ -0.22
COPB1-207ENST00000529866 CDCA5Q96FF9 252 aa13.68□□□□□ -0.22
COPB1-207ENST00000529866 HDAC9Q9UKV0 1011 aa13.68□□□□□ -0.22
COPB1-207ENST00000529866 HPS5Q9UPZ3 1129 aa13.68□□□□□ -0.22
COPB1-207ENST00000529866 DUOX1Q9NRD9 1551 aa13.67□□□□□ -0.22
COPB1-207ENST00000529866 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
COPB1-207ENST00000529866 ANXA1P04083 346 aa13.67□□□□□ -0.22
COPB1-207ENST00000529866 RASAL3Q86YV0 1011 aa13.67□□□□□ -0.22
COPB1-207ENST00000529866 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
COPB1-207ENST00000529866 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
COPB1-207ENST00000529866 BABAM1Q9NWV8 329 aa13.67□□□□□ -0.22
COPB1-207ENST00000529866 G3V3G9 751 aa13.66□□□□□ -0.22
COPB1-207ENST00000529866 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
COPB1-207ENST00000529866 GCC1Q96CN9 775 aa13.66□□□□□ -0.22
COPB1-207ENST00000529866 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
COPB1-207ENST00000529866 VIL1P09327 827 aaKnown RBP13.65□□□□□ -0.22
COPB1-207ENST00000529866 SF3B3Q15393 1217 aaKnown RBP13.65□□□□□ -0.22
COPB1-207ENST00000529866 DOK7Q18PE1 504 aa13.65□□□□□ -0.22
COPB1-207ENST00000529866 CELF1Q92879 486 aaKnown RBP13.65□□□□□ -0.22
COPB1-207ENST00000529866 ZC3H12CQ9C0D7 883 aaKnown RBP13.65□□□□□ -0.22
COPB1-207ENST00000529866 POLLQ9UGP5 575 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms