RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PRKAR2BP31323 418 aa15.53■□□□□ 0.08
AMBRA1-207ENST00000529553 PARP10Q53GL7 1025 aa15.53■□□□□ 0.08
AMBRA1-207ENST00000529553 KRT26Q7Z3Y9 468 aa15.53■□□□□ 0.08
AMBRA1-207ENST00000529553 SLC10A3P09131 477 aa15.52■□□□□ 0.08
AMBRA1-207ENST00000529553 GPTP24298 496 aa15.52■□□□□ 0.08
AMBRA1-207ENST00000529553 C3orf67Q6ZVT6 689 aa15.52■□□□□ 0.08
AMBRA1-207ENST00000529553 MCM10Q7L590 875 aa15.52■□□□□ 0.08
AMBRA1-207ENST00000529553 SLC51AQ86UW1 340 aa15.52■□□□□ 0.08
AMBRA1-207ENST00000529553 MICALL2Q8IY33 904 aa15.52■□□□□ 0.08
AMBRA1-207ENST00000529553 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
AMBRA1-207ENST00000529553 DCPSQ96C86 337 aaKnown RBP15.52■□□□□ 0.08
AMBRA1-207ENST00000529553 RSPH6AQ9H0K4 717 aa15.52■□□□□ 0.08
AMBRA1-207ENST00000529553 COL3A1P02461 1466 aaPredicted RBP15.52■□□□□ 0.07
AMBRA1-207ENST00000529553 CLSPNQ9HAW4 1339 aa15.51■□□□□ 0.07
AMBRA1-207ENST00000529553 CC2D1BQ5T0F9 858 aaKnown RBP15.51■□□□□ 0.07
AMBRA1-207ENST00000529553 GIGYF2Q6Y7W6 1299 aaKnown RBP15.51■□□□□ 0.07
AMBRA1-207ENST00000529553 TTLL7Q6ZT98 887 aa15.51■□□□□ 0.07
AMBRA1-207ENST00000529553 ABCC4O15439 1325 aa15.5■□□□□ 0.07
AMBRA1-207ENST00000529553 RPS12P25398 132 aaKnown RBP15.5■□□□□ 0.07
AMBRA1-207ENST00000529553 TMC4Q7Z404 712 aa15.5■□□□□ 0.07
AMBRA1-207ENST00000529553 PNISRQ8TF01 805 aaKnown RBP15.5■□□□□ 0.07
AMBRA1-207ENST00000529553 RRP7AQ9Y3A4 280 aaKnown RBP15.5■□□□□ 0.07
AMBRA1-207ENST00000529553 YDJCA8MPS7 323 aa15.49■□□□□ 0.07
AMBRA1-207ENST00000529553 DLK2Q6UY11 383 aa15.49■□□□□ 0.07
AMBRA1-207ENST00000529553 SAMD7Q7Z3H4 446 aa15.49■□□□□ 0.07
AMBRA1-207ENST00000529553 UTP14AQ9BVJ6 771 aaKnown RBP15.49■□□□□ 0.07
AMBRA1-207ENST00000529553 NUDCQ9Y266 331 aa15.49■□□□□ 0.07
AMBRA1-207ENST00000529553 SHTN1A0MZ66 631 aa15.48■□□□□ 0.07
AMBRA1-207ENST00000529553 NOM1Q5C9Z4 860 aaKnown RBP15.48■□□□□ 0.07
AMBRA1-207ENST00000529553 HABP4Q5JVS0 413 aaKnown RBP15.48■□□□□ 0.07
AMBRA1-207ENST00000529553 ZBTB3Q9H5J0 574 aa15.48■□□□□ 0.07
AMBRA1-207ENST00000529553 HDAC9Q9UKV0 1011 aa15.48■□□□□ 0.07
AMBRA1-207ENST00000529553 FKBP1BP68106 108 aa15.47■□□□□ 0.07
AMBRA1-207ENST00000529553 TBC1D10BQ4KMP7 808 aaPredicted RBP15.47■□□□□ 0.07
AMBRA1-207ENST00000529553 DDX46Q7L014 1031 aaKnown RBP15.47■□□□□ 0.07
AMBRA1-207ENST00000529553 CFAP53Q96M91 514 aa15.47■□□□□ 0.07
AMBRA1-207ENST00000529553 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
AMBRA1-207ENST00000529553 ERBB4Q15303 1308 aa15.46■□□□□ 0.07
AMBRA1-207ENST00000529553 PSMD14O00487 310 aa15.46■□□□□ 0.07
AMBRA1-207ENST00000529553 MYL6BP14649 208 aa15.46■□□□□ 0.07
AMBRA1-207ENST00000529553 GRAPQ13588 217 aa15.46■□□□□ 0.07
AMBRA1-207ENST00000529553 DCTN1Q14203 1278 aa15.46■□□□□ 0.07
AMBRA1-207ENST00000529553 SULF1Q8IWU6 871 aa15.46■□□□□ 0.07
AMBRA1-207ENST00000529553 GRAPLQ8TC17 118 aaPredicted RBP15.46■□□□□ 0.07
AMBRA1-207ENST00000529553 ADM5C9JUS6 153 aa15.45■□□□□ 0.06
AMBRA1-207ENST00000529553 EIF4A1P60842 406 aaKnown RBP15.45■□□□□ 0.06
AMBRA1-207ENST00000529553 WASHC4Q2M389 1173 aa15.45■□□□□ 0.06
AMBRA1-207ENST00000529553 FBXO46Q6PJ61 603 aaPredicted RBP15.45■□□□□ 0.06
AMBRA1-207ENST00000529553 ZNF296Q8WUU4 475 aaPredicted RBP15.45■□□□□ 0.06
AMBRA1-207ENST00000529553 MIS18AQ9NYP9 233 aa15.45■□□□□ 0.06
AMBRA1-207ENST00000529553 EGFRP00533 1210 aa15.44■□□□□ 0.06
AMBRA1-207ENST00000529553 RBM26Q5T8P6 1007 aaKnown RBP15.44■□□□□ 0.06
AMBRA1-207ENST00000529553 RASAL3Q86YV0 1011 aa15.44■□□□□ 0.06
AMBRA1-207ENST00000529553 TM4SF4P48230 202 aa15.43■□□□□ 0.06
AMBRA1-207ENST00000529553 NECTIN2Q92692 538 aa15.43■□□□□ 0.06
AMBRA1-207ENST00000529553 CDCA5Q96FF9 252 aa15.43■□□□□ 0.06
AMBRA1-207ENST00000529553 U2AF1L5P0DN76 240 aaPredicted RBP15.42■□□□□ 0.06
AMBRA1-207ENST00000529553 U2AF1Q01081 240 aaKnown RBP eCLIP15.42■□□□□ 0.06
AMBRA1-207ENST00000529553 NUP98P52948 1817 aa15.42■□□□□ 0.06
AMBRA1-207ENST00000529553 GPR25O00155 361 aa15.41■□□□□ 0.06
AMBRA1-207ENST00000529553 TBC1D8O95759 1140 aa15.41■□□□□ 0.06
AMBRA1-207ENST00000529553 VIL1P09327 827 aaKnown RBP15.41■□□□□ 0.06
AMBRA1-207ENST00000529553 KIF4BQ2VIQ3 1234 aa15.41■□□□□ 0.06
AMBRA1-207ENST00000529553 HSP90AB3PQ58FF7 597 aa15.41■□□□□ 0.06
AMBRA1-207ENST00000529553 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
AMBRA1-207ENST00000529553 CFHR5Q9BXR6 569 aa15.41■□□□□ 0.06
AMBRA1-207ENST00000529553 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
AMBRA1-207ENST00000529553 LRP10Q7Z4F1 713 aa15.4■□□□□ 0.06
AMBRA1-207ENST00000529553 EYA3Q99504 573 aa15.4■□□□□ 0.06
AMBRA1-207ENST00000529553 DBNDD1Q9H9R9 158 aa15.4■□□□□ 0.06
AMBRA1-207ENST00000529553 GGA3Q9NZ52 723 aa15.4■□□□□ 0.06
AMBRA1-207ENST00000529553 NSFL1CQ9UNZ2 370 aaKnown RBP15.4■□□□□ 0.06
AMBRA1-207ENST00000529553 AKAP11Q9UKA4 1901 aa15.4■□□□□ 0.06
AMBRA1-207ENST00000529553 ECE2O60344 883 aa15.39■□□□□ 0.05
AMBRA1-207ENST00000529553 NLRP10Q86W26 655 aa15.39■□□□□ 0.05
AMBRA1-207ENST00000529553 C6orf229H3BNL8 230 aa15.38■□□□□ 0.05
AMBRA1-207ENST00000529553 FKTNO75072 461 aa15.38■□□□□ 0.05
AMBRA1-207ENST00000529553 ZNF280AP59817 542 aaPredicted RBP15.38■□□□□ 0.05
AMBRA1-207ENST00000529553 SCARF1Q14162 830 aa15.38■□□□□ 0.05
AMBRA1-207ENST00000529553 PDIA6Q15084 440 aa15.38■□□□□ 0.05
AMBRA1-207ENST00000529553 KCNQ5Q9NR82 932 aa15.38■□□□□ 0.05
AMBRA1-207ENST00000529553 POLLQ9UGP5 575 aa15.38■□□□□ 0.05
AMBRA1-207ENST00000529553 TRMT112Q9UI30 125 aaKnown RBP15.38■□□□□ 0.05
AMBRA1-207ENST00000529553 SH3TC1Q8TE82 1336 aa15.38■□□□□ 0.05
AMBRA1-207ENST00000529553 RTL9Q8NET4 1388 aa15.37■□□□□ 0.05
AMBRA1-207ENST00000529553 RIMBP2O15034 1052 aa15.37■□□□□ 0.05
AMBRA1-207ENST00000529553 AGBL3Q8NEM8 1001 aa15.37■□□□□ 0.05
AMBRA1-207ENST00000529553 PITPNM2Q9BZ72 1349 aa15.37■□□□□ 0.05
AMBRA1-207ENST00000529553 FXR1P51114 621 aaKnown RBP eCLIP15.36■□□□□ 0.05
AMBRA1-207ENST00000529553 SREBF2Q12772 1141 aa15.36■□□□□ 0.05
AMBRA1-207ENST00000529553 TCIRG1Q13488 830 aa15.36■□□□□ 0.05
AMBRA1-207ENST00000529553 SF3B3Q15393 1217 aaKnown RBP15.36■□□□□ 0.05
AMBRA1-207ENST00000529553 DOK7Q18PE1 504 aa15.36■□□□□ 0.05
AMBRA1-207ENST00000529553 ANGEL2Q5VTE6 544 aaKnown RBP15.36■□□□□ 0.05
AMBRA1-207ENST00000529553 ZC3H12CQ9C0D7 883 aaKnown RBP15.36■□□□□ 0.05
AMBRA1-207ENST00000529553 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
AMBRA1-207ENST00000529553 NEFMP07197 916 aa15.35■□□□□ 0.05
AMBRA1-207ENST00000529553 GPSM2P81274 684 aa15.35■□□□□ 0.05
AMBRA1-207ENST00000529553 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
AMBRA1-207ENST00000529553 DUOX1Q9NRD9 1551 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms