RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
VPS11-203ENST00000529545 FMR1Q06787 632 aaKnown RBP eCLIP11.93□□□□□ -0.5
VPS11-203ENST00000529545 CST9Q5W186 159 aa11.93□□□□□ -0.5
VPS11-203ENST00000529545 PNISRQ8TF01 805 aaKnown RBP11.93□□□□□ -0.5
VPS11-203ENST00000529545 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
VPS11-203ENST00000529545 VPS33BQ9H267 617 aa11.93□□□□□ -0.5
VPS11-203ENST00000529545 ADARB2Q9NS39 739 aaKnown RBP11.93□□□□□ -0.5
VPS11-203ENST00000529545 RRP7AQ9Y3A4 280 aaKnown RBP11.93□□□□□ -0.5
VPS11-203ENST00000529545 RIC1Q4ADV7 1423 aa11.93□□□□□ -0.5
VPS11-203ENST00000529545 SNED1Q8TER0 1413 aa11.93□□□□□ -0.5
VPS11-203ENST00000529545 IBTKQ9P2D0 1353 aaPredicted RBP11.92□□□□□ -0.5
VPS11-203ENST00000529545 LTBP1Q14766 1721 aa11.92□□□□□ -0.5
VPS11-203ENST00000529545 GPTP24298 496 aa11.92□□□□□ -0.5
VPS11-203ENST00000529545 RGS19P49795 217 aa11.92□□□□□ -0.5
VPS11-203ENST00000529545 SUPT20HQ8NEM7 779 aa11.92□□□□□ -0.5
VPS11-203ENST00000529545 MIS18AQ9NYP9 233 aa11.92□□□□□ -0.5
VPS11-203ENST00000529545 GPRC5DQ9NZD1 345 aa11.92□□□□□ -0.5
VPS11-203ENST00000529545 TSKSQ9UJT2 592 aa11.92□□□□□ -0.5
VPS11-203ENST00000529545 AOC2O75106 756 aa11.91□□□□□ -0.5
VPS11-203ENST00000529545 CELF2O95319 508 aaKnown RBP11.91□□□□□ -0.5
VPS11-203ENST00000529545 PPP1R42Q7Z4L9 355 aa11.91□□□□□ -0.5
VPS11-203ENST00000529545 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
VPS11-203ENST00000529545 MS4A3Q96HJ5 214 aa11.91□□□□□ -0.5
VPS11-203ENST00000529545 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
VPS11-203ENST00000529545 ZNRF3Q9ULT6 936 aa11.91□□□□□ -0.5
VPS11-203ENST00000529545 COL4A5P29400 1685 aa11.91□□□□□ -0.5
VPS11-203ENST00000529545 MYL6BP14649 208 aa11.9□□□□□ -0.5
VPS11-203ENST00000529545 AOC3Q16853 763 aa11.9□□□□□ -0.5
VPS11-203ENST00000529545 SUSD4Q5VX71 490 aa11.9□□□□□ -0.5
VPS11-203ENST00000529545 TTLL7Q6ZT98 887 aa11.9□□□□□ -0.5
VPS11-203ENST00000529545 SAPCD2Q86UD0 394 aa11.9□□□□□ -0.5
VPS11-203ENST00000529545 HHIPL1Q96JK4 782 aa11.9□□□□□ -0.5
VPS11-203ENST00000529545 BCL2L13Q9BXK5 485 aa11.9□□□□□ -0.5
VPS11-203ENST00000529545 ZBTB3Q9H5J0 574 aa11.9□□□□□ -0.5
VPS11-203ENST00000529545 ATP6V0A2Q9Y487 856 aa11.9□□□□□ -0.5
VPS11-203ENST00000529545 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
VPS11-203ENST00000529545 CXCL9Q07325 125 aa11.89□□□□□ -0.51
VPS11-203ENST00000529545 PARP10Q53GL7 1025 aa11.89□□□□□ -0.51
VPS11-203ENST00000529545 CIAPIN1Q6FI81 312 aa11.89□□□□□ -0.51
VPS11-203ENST00000529545 ZNF34Q8IZ26 560 aa11.89□□□□□ -0.51
VPS11-203ENST00000529545 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
VPS11-203ENST00000529545 MCOLN1Q9GZU1 580 aa11.89□□□□□ -0.51
VPS11-203ENST00000529545 ZNF408Q9H9D4 720 aa11.89□□□□□ -0.51
VPS11-203ENST00000529545 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
VPS11-203ENST00000529545 CDHR2Q9BYE9 1310 aa11.88□□□□□ -0.51
VPS11-203ENST00000529545 NTSR2O95665 410 aa11.88□□□□□ -0.51
VPS11-203ENST00000529545 PPP2R1AP30153 589 aa11.88□□□□□ -0.51
VPS11-203ENST00000529545 GMPSP49915 693 aaPredicted RBP11.88□□□□□ -0.51
VPS11-203ENST00000529545 TNIP1Q15025 636 aa11.88□□□□□ -0.51
VPS11-203ENST00000529545 DPP8Q6V1X1 898 aaPredicted RBP11.88□□□□□ -0.51
VPS11-203ENST00000529545 GIGYF2Q6Y7W6 1299 aaKnown RBP11.88□□□□□ -0.51
VPS11-203ENST00000529545 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
VPS11-203ENST00000529545 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
VPS11-203ENST00000529545 GLIS2Q9BZE0 524 aaPredicted RBP11.88□□□□□ -0.51
VPS11-203ENST00000529545 PCDH10Q9P2E7 1040 aa11.88□□□□□ -0.51
VPS11-203ENST00000529545 BBOX1O75936 387 aa11.87□□□□□ -0.51
VPS11-203ENST00000529545 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
VPS11-203ENST00000529545 DGKZQ13574 1117 aa11.87□□□□□ -0.51
VPS11-203ENST00000529545 MPNDQ8N594 471 aa11.87□□□□□ -0.51
VPS11-203ENST00000529545 PGAP2Q9UHJ9 254 aa11.87□□□□□ -0.51
VPS11-203ENST00000529545 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
VPS11-203ENST00000529545 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
VPS11-203ENST00000529545 H7C1D1 291 aa11.86□□□□□ -0.51
VPS11-203ENST00000529545 RAD17O75943 681 aa11.86□□□□□ -0.51
VPS11-203ENST00000529545 NOGQ13253 232 aa11.86□□□□□ -0.51
VPS11-203ENST00000529545 SLC10A5Q5PT55 438 aa11.86□□□□□ -0.51
VPS11-203ENST00000529545 SP8Q8IXZ3 490 aa11.86□□□□□ -0.51
VPS11-203ENST00000529545 RTFDC1Q9BY42 306 aaPredicted RBP11.86□□□□□ -0.51
VPS11-203ENST00000529545 KDM3BQ7LBC6 1761 aa11.86□□□□□ -0.51
VPS11-203ENST00000529545 ABCC4O15439 1325 aa11.86□□□□□ -0.51
VPS11-203ENST00000529545 KIAA2012Q0VF49 1180 aa11.85□□□□□ -0.51
VPS11-203ENST00000529545 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
VPS11-203ENST00000529545 DDX46Q7L014 1031 aaKnown RBP11.85□□□□□ -0.51
VPS11-203ENST00000529545 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
VPS11-203ENST00000529545 DLG5Q8TDM6 1919 aa11.84□□□□□ -0.51
VPS11-203ENST00000529545 MAP3K13O43283 966 aa11.84□□□□□ -0.51
VPS11-203ENST00000529545 HUNKP57058 714 aa11.84□□□□□ -0.51
VPS11-203ENST00000529545 GSE1Q14687 1217 aa11.84□□□□□ -0.51
VPS11-203ENST00000529545 HSP90AB3PQ58FF7 597 aa11.84□□□□□ -0.51
VPS11-203ENST00000529545 SLC51AQ86UW1 340 aa11.84□□□□□ -0.51
VPS11-203ENST00000529545 PNNQ9H307 717 aaKnown RBP11.84□□□□□ -0.51
VPS11-203ENST00000529545 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
VPS11-203ENST00000529545 HIRAP54198 1017 aaPredicted RBP11.83□□□□□ -0.52
VPS11-203ENST00000529545 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
VPS11-203ENST00000529545 TMC4Q7Z404 712 aa11.83□□□□□ -0.52
VPS11-203ENST00000529545 USP48Q86UV5 1035 aa11.83□□□□□ -0.52
VPS11-203ENST00000529545 C2orf69Q8N8R5 385 aa11.83□□□□□ -0.52
VPS11-203ENST00000529545 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
VPS11-203ENST00000529545 NFE2L2Q16236 605 aa11.82□□□□□ -0.52
VPS11-203ENST00000529545 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
VPS11-203ENST00000529545 TRPM4Q8TD43 1214 aa11.82□□□□□ -0.52
VPS11-203ENST00000529545 DPF2Q92785 391 aa11.82□□□□□ -0.52
VPS11-203ENST00000529545 CCDC102AQ96A19 550 aa11.82□□□□□ -0.52
VPS11-203ENST00000529545 THUMPD2Q9BTF0 503 aaKnown RBP11.82□□□□□ -0.52
VPS11-203ENST00000529545 TRMT112Q9UI30 125 aaKnown RBP11.82□□□□□ -0.52
VPS11-203ENST00000529545 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
VPS11-203ENST00000529545 ANKRD36CQ5JPF3 1778 aa11.82□□□□□ -0.52
VPS11-203ENST00000529545 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
VPS11-203ENST00000529545 GRAPQ13588 217 aa11.81□□□□□ -0.52
VPS11-203ENST00000529545 ASTLQ6HA08 431 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms