RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 DPP8Q6V1X1 898 aaPredicted RBP18.79■□□□□ 0.6
TRIM3-208ENST00000529058 PHACTR3Q96KR7 559 aa18.79■□□□□ 0.6
TRIM3-208ENST00000529058 NTSR2O95665 410 aa18.78■□□□□ 0.6
TRIM3-208ENST00000529058 KIF6Q6ZMV9 814 aa18.78■□□□□ 0.6
TRIM3-208ENST00000529058 SAMD7Q7Z3H4 446 aa18.78■□□□□ 0.6
TRIM3-208ENST00000529058 REM2Q8IYK8 340 aaPredicted RBP18.78■□□□□ 0.6
TRIM3-208ENST00000529058 NLRP3Q96P20 1036 aa18.78■□□□□ 0.6
TRIM3-208ENST00000529058 ABCC4O15439 1325 aa18.77■□□□□ 0.6
TRIM3-208ENST00000529058 YDJCA8MPS7 323 aa18.77■□□□□ 0.6
TRIM3-208ENST00000529058 MCM10Q7L590 875 aa18.77■□□□□ 0.6
TRIM3-208ENST00000529058 MPNDQ8N594 471 aa18.77■□□□□ 0.6
TRIM3-208ENST00000529058 RTF1Q92541 710 aaKnown RBP18.77■□□□□ 0.6
TRIM3-208ENST00000529058 DPF2Q92785 391 aa18.77■□□□□ 0.6
TRIM3-208ENST00000529058 ADM5C9JUS6 153 aa18.76■□□□□ 0.59
TRIM3-208ENST00000529058 PRKAR2BP31323 418 aa18.76■□□□□ 0.59
TRIM3-208ENST00000529058 TTLL7Q6ZT98 887 aa18.76■□□□□ 0.59
TRIM3-208ENST00000529058 SP8Q8IXZ3 490 aa18.76■□□□□ 0.59
TRIM3-208ENST00000529058 ZNF34Q8IZ26 560 aa18.76■□□□□ 0.59
TRIM3-208ENST00000529058 DCPSQ96C86 337 aaKnown RBP18.76■□□□□ 0.59
TRIM3-208ENST00000529058 HDAC9Q9UKV0 1011 aa18.76■□□□□ 0.59
TRIM3-208ENST00000529058 ZBTB12Q9Y330 459 aaPredicted RBP18.76■□□□□ 0.59
TRIM3-208ENST00000529058 LAMB2P55268 1798 aa18.76■□□□□ 0.59
TRIM3-208ENST00000529058 TBC1D10BQ4KMP7 808 aaPredicted RBP18.75■□□□□ 0.59
TRIM3-208ENST00000529058 CC2D1BQ5T0F9 858 aaKnown RBP18.75■□□□□ 0.59
TRIM3-208ENST00000529058 PPP1R42Q7Z4L9 355 aa18.75■□□□□ 0.59
TRIM3-208ENST00000529058 ZBTB3Q9H5J0 574 aa18.75■□□□□ 0.59
TRIM3-208ENST00000529058 ANKRD36CQ5JPF3 1778 aa18.75■□□□□ 0.59
TRIM3-208ENST00000529058 BBOX1O75936 387 aa18.74■□□□□ 0.59
TRIM3-208ENST00000529058 EGFRP00533 1210 aa18.74■□□□□ 0.59
TRIM3-208ENST00000529058 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
TRIM3-208ENST00000529058 RRP7AQ9Y3A4 280 aaKnown RBP18.73■□□□□ 0.59
TRIM3-208ENST00000529058 PSMD14O00487 310 aa18.72■□□□□ 0.59
TRIM3-208ENST00000529058 SLC10A5Q5PT55 438 aa18.72■□□□□ 0.59
TRIM3-208ENST00000529058 RASAL3Q86YV0 1011 aa18.72■□□□□ 0.59
TRIM3-208ENST00000529058 ZNF296Q8WUU4 475 aaPredicted RBP18.72■□□□□ 0.59
TRIM3-208ENST00000529058 DUOX1Q9NRD9 1551 aa18.72■□□□□ 0.59
TRIM3-208ENST00000529058 TAF1P21675 1872 aa18.71■□□□□ 0.59
TRIM3-208ENST00000529058 MKI67P46013 3256 aaKnown RBP18.71■□□□□ 0.59
TRIM3-208ENST00000529058 DCTN1Q14203 1278 aa18.71■□□□□ 0.59
TRIM3-208ENST00000529058 PARP10Q53GL7 1025 aa18.71■□□□□ 0.59
TRIM3-208ENST00000529058 RBM26Q5T8P6 1007 aaKnown RBP18.71■□□□□ 0.59
TRIM3-208ENST00000529058 FBXO46Q6PJ61 603 aaPredicted RBP18.71■□□□□ 0.59
TRIM3-208ENST00000529058 GIGYF2Q6Y7W6 1299 aaKnown RBP18.71■□□□□ 0.59
TRIM3-208ENST00000529058 PER1O15534 1290 aaPredicted RBP18.7■□□□□ 0.58
TRIM3-208ENST00000529058 MYL6BP14649 208 aa18.7■□□□□ 0.58
TRIM3-208ENST00000529058 RPS12P25398 132 aaKnown RBP18.7■□□□□ 0.58
TRIM3-208ENST00000529058 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
TRIM3-208ENST00000529058 SULF1Q8IWU6 871 aa18.7■□□□□ 0.58
TRIM3-208ENST00000529058 KDM3BQ7LBC6 1761 aa18.69■□□□□ 0.58
TRIM3-208ENST00000529058 TBC1D8O95759 1140 aa18.69■□□□□ 0.58
TRIM3-208ENST00000529058 UTP14AQ9BVJ6 771 aaKnown RBP18.69■□□□□ 0.58
TRIM3-208ENST00000529058 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
TRIM3-208ENST00000529058 LRRC37AA6NMS7 1700 aa18.69■□□□□ 0.58
TRIM3-208ENST00000529058 HTATSF1O43719 755 aaKnown RBP18.68■□□□□ 0.58
TRIM3-208ENST00000529058 KIF4BQ2VIQ3 1234 aa18.68■□□□□ 0.58
TRIM3-208ENST00000529058 CDCA5Q96FF9 252 aa18.68■□□□□ 0.58
TRIM3-208ENST00000529058 GGA3Q9NZ52 723 aa18.68■□□□□ 0.58
TRIM3-208ENST00000529058 DDX60Q8IY21 1712 aaKnown RBP18.68■□□□□ 0.58
TRIM3-208ENST00000529058 PAPPA2Q9BXP8 1791 aa18.68■□□□□ 0.58
TRIM3-208ENST00000529058 FXR1P51114 621 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRIM3-208ENST00000529058 GRAPQ13588 217 aa18.67■□□□□ 0.58
TRIM3-208ENST00000529058 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
TRIM3-208ENST00000529058 GRAPLQ8TC17 118 aaPredicted RBP18.67■□□□□ 0.58
TRIM3-208ENST00000529058 DBNDD1Q9H9R9 158 aa18.67■□□□□ 0.58
TRIM3-208ENST00000529058 GPR25O00155 361 aa18.66■□□□□ 0.58
TRIM3-208ENST00000529058 WASHC4Q2M389 1173 aa18.66■□□□□ 0.58
TRIM3-208ENST00000529058 NOM1Q5C9Z4 860 aaKnown RBP18.66■□□□□ 0.58
TRIM3-208ENST00000529058 FKBP1BP68106 108 aa18.65■□□□□ 0.58
TRIM3-208ENST00000529058 TMC4Q7Z404 712 aa18.65■□□□□ 0.58
TRIM3-208ENST00000529058 ASTN2O75129 1339 aaPredicted RBP18.64■□□□□ 0.57
TRIM3-208ENST00000529058 RTL9Q8NET4 1388 aa18.64■□□□□ 0.57
TRIM3-208ENST00000529058 SCN9AQ15858 1988 aa18.63■□□□□ 0.57
TRIM3-208ENST00000529058 HCLS1P14317 486 aaPredicted RBP18.63■□□□□ 0.57
TRIM3-208ENST00000529058 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
TRIM3-208ENST00000529058 KCNQ5Q9NR82 932 aa18.63■□□□□ 0.57
TRIM3-208ENST00000529058 RBBP6Q7Z6E9 1792 aaKnown RBP18.63■□□□□ 0.57
TRIM3-208ENST00000529058 RIMBP2O15034 1052 aa18.62■□□□□ 0.57
TRIM3-208ENST00000529058 ECE2O60344 883 aa18.62■□□□□ 0.57
TRIM3-208ENST00000529058 TM4SF4P48230 202 aa18.62■□□□□ 0.57
TRIM3-208ENST00000529058 EIF4A1P60842 406 aaKnown RBP18.62■□□□□ 0.57
TRIM3-208ENST00000529058 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
TRIM3-208ENST00000529058 CFAP53Q96M91 514 aa18.62■□□□□ 0.57
TRIM3-208ENST00000529058 NUDCQ9Y266 331 aa18.62■□□□□ 0.57
TRIM3-208ENST00000529058 ERBB4Q15303 1308 aa18.62■□□□□ 0.57
TRIM3-208ENST00000529058 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
TRIM3-208ENST00000529058 FKTNO75072 461 aa18.61■□□□□ 0.57
TRIM3-208ENST00000529058 ANGEL2Q5VTE6 544 aaKnown RBP18.61■□□□□ 0.57
TRIM3-208ENST00000529058 NSFL1CQ9UNZ2 370 aaKnown RBP18.61■□□□□ 0.57
TRIM3-208ENST00000529058 KIAA0100Q14667 2235 aaKnown RBP18.61■□□□□ 0.57
TRIM3-208ENST00000529058 HTTP42858 3142 aa18.6■□□□□ 0.57
TRIM3-208ENST00000529058 POTEFA5A3E0 1075 aa18.6■□□□□ 0.57
TRIM3-208ENST00000529058 U2AF1L5P0DN76 240 aaPredicted RBP18.6■□□□□ 0.57
TRIM3-208ENST00000529058 U2AF1Q01081 240 aaKnown RBP eCLIP18.6■□□□□ 0.57
TRIM3-208ENST00000529058 DOK7Q18PE1 504 aa18.6■□□□□ 0.57
TRIM3-208ENST00000529058 CENPFP49454 3210 aa18.59■□□□□ 0.57
TRIM3-208ENST00000529058 C6orf229H3BNL8 230 aa18.59■□□□□ 0.57
TRIM3-208ENST00000529058 VIL1P09327 827 aaKnown RBP18.59■□□□□ 0.57
TRIM3-208ENST00000529058 SCARF1Q14162 830 aa18.59■□□□□ 0.57
TRIM3-208ENST00000529058 INTS3Q68E01 1043 aaKnown RBP18.59■□□□□ 0.57
TRIM3-208ENST00000529058 MOB2Q70IA6 237 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms