RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 GRIPAP1Q4V328 841 aa7.79□□□□□ -1.16
MACF1-228ENST00000528611 TBC1D9BQ66K14 1250 aa7.79□□□□□ -1.16
MACF1-228ENST00000528611 MAMSTRQ6ZN01 415 aa7.79□□□□□ -1.16
MACF1-228ENST00000528611 TMC4Q7Z404 712 aa7.79□□□□□ -1.16
MACF1-228ENST00000528611 AMIGO3Q86WK7 504 aa7.79□□□□□ -1.16
MACF1-228ENST00000528611 NBPF5PQ86XG9 351 aaPredicted RBP7.79□□□□□ -1.16
MACF1-228ENST00000528611 ITPRIPQ8IWB1 547 aa7.79□□□□□ -1.16
MACF1-228ENST00000528611 CLUAP1Q96AJ1 413 aa7.79□□□□□ -1.16
MACF1-228ENST00000528611 NLRP3Q96P20 1036 aa7.79□□□□□ -1.16
MACF1-228ENST00000528611 METRNQ9UJH8 293 aa7.79□□□□□ -1.16
MACF1-228ENST00000528611 UBN2Q6ZU65 1347 aa7.78□□□□□ -1.16
MACF1-228ENST00000528611 ATMINO43313 823 aaPredicted RBP7.78□□□□□ -1.16
MACF1-228ENST00000528611 HMMRO75330 724 aa7.78□□□□□ -1.16
MACF1-228ENST00000528611 CSF1RP07333 972 aa7.78□□□□□ -1.16
MACF1-228ENST00000528611 RLBP1P12271 317 aa7.78□□□□□ -1.16
MACF1-228ENST00000528611 GTF2E1P29083 439 aaPredicted RBP7.78□□□□□ -1.16
MACF1-228ENST00000528611 TGFB2P61812 414 aa7.78□□□□□ -1.16
MACF1-228ENST00000528611 CWF19L2Q2TBE0 894 aaKnown RBP7.78□□□□□ -1.16
MACF1-228ENST00000528611 SUSD4Q5VX71 490 aa7.78□□□□□ -1.16
MACF1-228ENST00000528611 CNBD1Q8NA66 436 aa7.78□□□□□ -1.16
MACF1-228ENST00000528611 SPON1Q9HCB6 807 aa7.78□□□□□ -1.16
MACF1-228ENST00000528611 SRP68Q9UHB9 627 aaKnown RBP7.78□□□□□ -1.16
MACF1-228ENST00000528611 CD2APQ9Y5K6 639 aa7.78□□□□□ -1.16
MACF1-228ENST00000528611 ATP5J2-PTCD1G3V325 749 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 IRS4O14654 1257 aaPredicted RBP7.77□□□□□ -1.17
MACF1-228ENST00000528611 PLIN1O60240 522 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 MMP10P09238 476 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 NBPF7P0C2Y1 421 aaPredicted RBP7.77□□□□□ -1.17
MACF1-228ENST00000528611 ALDH1B1P30837 517 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 HOXA10P31260 410 aaPredicted RBP7.77□□□□□ -1.17
MACF1-228ENST00000528611 R3HDM1Q15032 1099 aaKnown RBP7.77□□□□□ -1.17
MACF1-228ENST00000528611 CRY2Q49AN0 593 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 CCDC152Q4G0S7 254 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 HSP90AB4PQ58FF6 505 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 PRR5LQ6MZQ0 368 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 PANK1Q8TE04 598 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 SGIP1Q9BQI5 828 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 COG6Q9Y2V7 657 aa7.77□□□□□ -1.17
MACF1-228ENST00000528611 AFDNP55196 1824 aaKnown RBP7.76□□□□□ -1.17
MACF1-228ENST00000528611 NPHP1O15259 732 aa7.76□□□□□ -1.17
MACF1-228ENST00000528611 GPTP24298 496 aa7.76□□□□□ -1.17
MACF1-228ENST00000528611 ATP8B2P98198 1209 aa7.76□□□□□ -1.17
MACF1-228ENST00000528611 CC2D2BQ6DHV5 1058 aa7.76□□□□□ -1.17
MACF1-228ENST00000528611 UBE3BQ7Z3V4 1068 aa7.76□□□□□ -1.17
MACF1-228ENST00000528611 CRAMP1Q96RY5 1269 aa7.76□□□□□ -1.17
MACF1-228ENST00000528611 LAMB2P55268 1798 aa7.76□□□□□ -1.17
MACF1-228ENST00000528611 BBOX1O75936 387 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 CTSWP56202 376 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 DDR1Q08345 913 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 HDAC1Q13547 482 aaPredicted RBP7.75□□□□□ -1.17
MACF1-228ENST00000528611 ANKRD44Q8N8A2 993 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 TTLL11Q8NHH1 800 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 SSH3Q8TE77 659 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 FAM89AQ96GI7 184 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 MS4A3Q96HJ5 214 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 CDC5LQ99459 802 aaKnown RBP7.75□□□□□ -1.17
MACF1-228ENST00000528611 MEIS3Q99687 375 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 COPRSQ9NQ92 184 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 NOP58Q9Y2X3 529 aaKnown RBP7.75□□□□□ -1.17
MACF1-228ENST00000528611 C10orf71Q711Q0 1435 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 KIF13BQ9NQT8 1826 aa7.75□□□□□ -1.17
MACF1-228ENST00000528611 MYH3P11055 1940 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 H0YIN7 160 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 CIAO1O76071 339 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 SRGNP10124 158 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 NPR1P16066 1061 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 FOXO4P98177 505 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 IFIT5Q13325 482 aaKnown RBP7.74□□□□□ -1.17
MACF1-228ENST00000528611 CCDC57Q2TAC2 916 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 ERFEQ4G0M1 354 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 LCE2DQ5TA82 110 aaPredicted RBP7.74□□□□□ -1.17
MACF1-228ENST00000528611 C20orf194Q5TEA3 1177 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 SOGA3Q5TF21 947 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 STYK1Q6J9G0 422 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 CEP85Q6P2H3 762 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 BICDL1Q6ZP65 573 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 CNKSR1Q969H4 720 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 GCC1Q96CN9 775 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 MASTLQ96GX5 879 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 KAZALD1Q96I82 304 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 CRBNQ96SW2 442 aa7.74□□□□□ -1.17
MACF1-228ENST00000528611 RWDD1Q9H446 243 aaPredicted RBP7.74□□□□□ -1.17
MACF1-228ENST00000528611 ANKRD18BA2A2Z9 1011 aa7.73□□□□□ -1.17
MACF1-228ENST00000528611 SPDYE4A6NLX3 237 aa7.73□□□□□ -1.17
MACF1-228ENST00000528611 RAB11FIP3O75154 756 aa7.73□□□□□ -1.17
MACF1-228ENST00000528611 PTGER2P43116 358 aa7.73□□□□□ -1.17
MACF1-228ENST00000528611 LMBR1LQ6UX01 489 aa7.73□□□□□ -1.17
MACF1-228ENST00000528611 DDX46Q7L014 1031 aaKnown RBP7.73□□□□□ -1.17
MACF1-228ENST00000528611 ERC1Q8IUD2 1116 aa7.73□□□□□ -1.17
MACF1-228ENST00000528611 RBM17Q96I25 401 aaKnown RBP7.73□□□□□ -1.17
MACF1-228ENST00000528611 SUCLG2Q96I99 432 aa7.73□□□□□ -1.17
MACF1-228ENST00000528611 VPS33BQ9H267 617 aa7.73□□□□□ -1.17
MACF1-228ENST00000528611 BICC1Q9H694 974 aaKnown RBP7.73□□□□□ -1.17
MACF1-228ENST00000528611 BSDC1Q9NW68 430 aaPredicted RBP7.73□□□□□ -1.17
MACF1-228ENST00000528611 TNNQ9UQP3 1299 aa7.73□□□□□ -1.17
MACF1-228ENST00000528611 LRRFIP2Q9Y608 721 aaKnown RBP7.73□□□□□ -1.17
MACF1-228ENST00000528611 SRGAP3O43295 1099 aa7.72□□□□□ -1.17
MACF1-228ENST00000528611 IGSF3O75054 1194 aa7.72□□□□□ -1.17
MACF1-228ENST00000528611 IGHMBP2P38935 993 aaKnown RBP7.72□□□□□ -1.17
MACF1-228ENST00000528611 RPS8P62241 208 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms