RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 SIRT2Q8IXJ6 389 aa15.21■□□□□ 0.03
TRAF3IP2-211ENST00000528599 CD2APQ9Y5K6 639 aa15.21■□□□□ 0.03
TRAF3IP2-211ENST00000528599 ANKRD31Q8N7Z5 1873 aa15.21■□□□□ 0.03
TRAF3IP2-211ENST00000528599 TNRC6CQ9HCJ0 1690 aaKnown RBP15.2■□□□□ 0.02
TRAF3IP2-211ENST00000528599 CSF1RP07333 972 aa15.2■□□□□ 0.02
TRAF3IP2-211ENST00000528599 TTLL11Q8NHH1 800 aa15.2■□□□□ 0.02
TRAF3IP2-211ENST00000528599 RIC1Q4ADV7 1423 aa15.19■□□□□ 0.02
TRAF3IP2-211ENST00000528599 PNMA6EA0A0J9YXQ4 647 aa15.19■□□□□ 0.02
TRAF3IP2-211ENST00000528599 HSP90B1P14625 803 aaKnown RBP15.19■□□□□ 0.02
TRAF3IP2-211ENST00000528599 ATP8B2P98198 1209 aa15.19■□□□□ 0.02
TRAF3IP2-211ENST00000528599 MTX1Q13505 466 aa15.19■□□□□ 0.02
TRAF3IP2-211ENST00000528599 CCDC85AQ96PX6 553 aaPredicted RBP15.19■□□□□ 0.02
TRAF3IP2-211ENST00000528599 RPAP2Q8IXW5 612 aaPredicted RBP15.19■□□□□ 0.02
TRAF3IP2-211ENST00000528599 NLRP3Q96P20 1036 aa15.19■□□□□ 0.02
TRAF3IP2-211ENST00000528599 BRIP1Q9BX63 1249 aa15.19■□□□□ 0.02
TRAF3IP2-211ENST00000528599 BRCA1P38398 1863 aaKnown RBP15.18■□□□□ 0.02
TRAF3IP2-211ENST00000528599 SF3B3Q15393 1217 aaKnown RBP15.18■□□□□ 0.02
TRAF3IP2-211ENST00000528599 FAM161AQ3B820 660 aa15.18■□□□□ 0.02
TRAF3IP2-211ENST00000528599 WWC3Q9ULE0 1092 aa15.18■□□□□ 0.02
TRAF3IP2-211ENST00000528599 MYH3P11055 1940 aa15.18■□□□□ 0.02
TRAF3IP2-211ENST00000528599 KLRG2A4D1S0 409 aaPredicted RBP15.17■□□□□ 0.02
TRAF3IP2-211ENST00000528599 SRGAP3O43295 1099 aa15.17■□□□□ 0.02
TRAF3IP2-211ENST00000528599 GREM2Q9H772 168 aa15.17■□□□□ 0.02
TRAF3IP2-211ENST00000528599 CHMP3Q9Y3E7 222 aa15.17■□□□□ 0.02
TRAF3IP2-211ENST00000528599 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
TRAF3IP2-211ENST00000528599 KCNA3P22001 575 aa15.16■□□□□ 0.02
TRAF3IP2-211ENST00000528599 POLA2Q14181 598 aa15.16■□□□□ 0.02
TRAF3IP2-211ENST00000528599 SSH3Q8TE77 659 aa15.16■□□□□ 0.02
TRAF3IP2-211ENST00000528599 A0A0G2JLW4 131 aa15.16■□□□□ 0.02
TRAF3IP2-211ENST00000528599 RFX5P48382 616 aaPredicted RBP15.16■□□□□ 0.02
TRAF3IP2-211ENST00000528599 CRY2Q49AN0 593 aa15.16■□□□□ 0.02
TRAF3IP2-211ENST00000528599 CCDC152Q4G0S7 254 aa15.16■□□□□ 0.02
TRAF3IP2-211ENST00000528599 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
TRAF3IP2-211ENST00000528599 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
TRAF3IP2-211ENST00000528599 DPEP1P16444 411 aa15.15■□□□□ 0.02
TRAF3IP2-211ENST00000528599 YBX3P16989 372 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRAF3IP2-211ENST00000528599 CHRNA5P30532 468 aa15.15■□□□□ 0.02
TRAF3IP2-211ENST00000528599 PDE6BP35913 854 aa15.15■□□□□ 0.02
TRAF3IP2-211ENST00000528599 RTL9Q8NET4 1388 aa15.15■□□□□ 0.02
TRAF3IP2-211ENST00000528599 IGHDP01880 384 aa15.14■□□□□ 0.01
TRAF3IP2-211ENST00000528599 COL4A1P02462 1669 aa15.14■□□□□ 0.01
TRAF3IP2-211ENST00000528599 ITGA6P23229 1130 aa15.14■□□□□ 0.01
TRAF3IP2-211ENST00000528599 KLHDC4Q8TBB5 520 aa15.14■□□□□ 0.01
TRAF3IP2-211ENST00000528599 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
TRAF3IP2-211ENST00000528599 DLEC1Q9Y238 1755 aa15.14■□□□□ 0.01
TRAF3IP2-211ENST00000528599 SRGNP10124 158 aa15.13■□□□□ 0.01
TRAF3IP2-211ENST00000528599 TGFB2P61812 414 aa15.13■□□□□ 0.01
TRAF3IP2-211ENST00000528599 PTPN12Q05209 780 aaKnown RBP15.13■□□□□ 0.01
TRAF3IP2-211ENST00000528599 IFIT5Q13325 482 aaKnown RBP15.13■□□□□ 0.01
TRAF3IP2-211ENST00000528599 HDAC1Q13547 482 aaPredicted RBP15.13■□□□□ 0.01
TRAF3IP2-211ENST00000528599 CCDC57Q2TAC2 916 aa15.13■□□□□ 0.01
TRAF3IP2-211ENST00000528599 ZNF594Q96JF6 807 aaPredicted RBP15.13■□□□□ 0.01
TRAF3IP2-211ENST00000528599 PA2G4Q9UQ80 394 aaKnown RBP15.13■□□□□ 0.01
TRAF3IP2-211ENST00000528599 ANKRD18BA2A2Z9 1011 aa15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 HMMRO75330 724 aa15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 C2CD5Q86YS7 1000 aa15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 TAF1P21675 1872 aa15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 HOXA10P31260 410 aaPredicted RBP15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 B4GALNT3Q6L9W6 998 aa15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 DDX46Q7L014 1031 aaKnown RBP15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 RPGRQ92834 1020 aaKnown RBP15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 CELF1Q92879 486 aaKnown RBP15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 RWDD1Q9H446 243 aaPredicted RBP15.12■□□□□ 0.01
TRAF3IP2-211ENST00000528599 H0YIN7 160 aa15.11■□□□□ 0.01
TRAF3IP2-211ENST00000528599 CCDC136Q96JN2 1154 aa15.11■□□□□ 0.01
TRAF3IP2-211ENST00000528599 COPRSQ9NQ92 184 aa15.11■□□□□ 0.01
TRAF3IP2-211ENST00000528599 NPR1P16066 1061 aa15.1■□□□□ 0.01
TRAF3IP2-211ENST00000528599 RBM17Q96I25 401 aaKnown RBP15.1■□□□□ 0.01
TRAF3IP2-211ENST00000528599 DCTPP1Q9H773 170 aa15.1■□□□□ 0.01
TRAF3IP2-211ENST00000528599 NOP58Q9Y2X3 529 aaKnown RBP15.1■□□□□ 0.01
TRAF3IP2-211ENST00000528599 SURF6O75683 361 aaKnown RBP15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 TAF7LQ5H9L4 462 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 MASTLQ96GX5 879 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 CDC5LQ99459 802 aaKnown RBP15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 PUS3Q9BZE2 481 aaKnown RBP15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 SIL1Q9H173 461 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 PDZRN3Q9UPQ7 1066 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 EXOC6BQ9Y2D4 811 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 RPS8P62241 208 aaKnown RBP15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 GRAPQ13588 217 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 LRRC24Q50LG9 513 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 STYK1Q6J9G0 422 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 ANKRD18AQ8IVF6 992 aa15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 GRAPLQ8TC17 118 aaPredicted RBP15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 ZNF622Q969S3 477 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRAF3IP2-211ENST00000528599 CACNA1SQ13698 1873 aa15.08■□□□□ 0.01
TRAF3IP2-211ENST00000528599 GPR162Q16538 588 aa15.08■□□□□ 0
TRAF3IP2-211ENST00000528599 LDHAL6AQ6ZMR3 332 aa15.08■□□□□ 0
TRAF3IP2-211ENST00000528599 ATG9AQ7Z3C6 839 aa15.08■□□□□ 0
TRAF3IP2-211ENST00000528599 KDM2BQ8NHM5 1336 aa15.07■□□□□ 0
TRAF3IP2-211ENST00000528599 EYA2O00167 538 aa15.07■□□□□ 0
TRAF3IP2-211ENST00000528599 IGHMBP2P38935 993 aaKnown RBP15.07■□□□□ 0
TRAF3IP2-211ENST00000528599 SLC51AQ86UW1 340 aa15.07■□□□□ 0
TRAF3IP2-211ENST00000528599 SMC5Q8IY18 1101 aa15.07■□□□□ 0
TRAF3IP2-211ENST00000528599 ARFGEF1Q9Y6D6 1849 aa15.07■□□□□ 0
TRAF3IP2-211ENST00000528599 SPEF2Q9C093 1822 aa15.07■□□□□ 0
TRAF3IP2-211ENST00000528599 CIAO1O76071 339 aa15.06■□□□□ 0
TRAF3IP2-211ENST00000528599 ALDH1B1P30837 517 aa15.06■□□□□ 0
TRAF3IP2-211ENST00000528599 G3BP1Q13283 466 aaKnown RBP eCLIP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms