RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 PI4KAP2A4QPH2 592 aa23.87■■□□□ 1.41
YIF1A-212ENST00000528575 PI4KAP1Q8N8J0 262 aa23.87■■□□□ 1.41
YIF1A-212ENST00000528575 TAF1P21675 1872 aa23.87■■□□□ 1.41
YIF1A-212ENST00000528575 CHADLQ6NUI6 762 aa23.86■■□□□ 1.41
YIF1A-212ENST00000528575 CRAMP1Q96RY5 1269 aa23.86■■□□□ 1.41
YIF1A-212ENST00000528575 MAP3K2Q9Y2U5 619 aa23.86■■□□□ 1.41
YIF1A-212ENST00000528575 PASKQ96RG2 1323 aa23.85■■□□□ 1.41
YIF1A-212ENST00000528575 GRIPAP1Q4V328 841 aa23.85■■□□□ 1.41
YIF1A-212ENST00000528575 ZBTB38Q8NAP3 1195 aaPredicted RBP23.85■■□□□ 1.41
YIF1A-212ENST00000528575 RPGRQ92834 1020 aaKnown RBP23.85■■□□□ 1.41
YIF1A-212ENST00000528575 CWC25Q9NXE8 425 aaPredicted RBP23.85■■□□□ 1.41
YIF1A-212ENST00000528575 DDX60Q8IY21 1712 aaKnown RBP23.84■■□□□ 1.41
YIF1A-212ENST00000528575 FKBP5Q13451 457 aaPredicted RBP23.84■■□□□ 1.41
YIF1A-212ENST00000528575 RBM17Q96I25 401 aaKnown RBP23.84■■□□□ 1.41
YIF1A-212ENST00000528575 MYD88Q99836 296 aa23.84■■□□□ 1.41
YIF1A-212ENST00000528575 ATP5J2-PTCD1G3V325 749 aa23.83■■□□□ 1.41
YIF1A-212ENST00000528575 ITGBL1O95965 494 aaPredicted RBP23.83■■□□□ 1.41
YIF1A-212ENST00000528575 ALDH1L2Q3SY69 923 aa23.83■■□□□ 1.41
YIF1A-212ENST00000528575 CC2D2BQ6DHV5 1058 aa23.83■■□□□ 1.41
YIF1A-212ENST00000528575 ABCC4O15439 1325 aa23.83■■□□□ 1.4
YIF1A-212ENST00000528575 TCERG1O14776 1098 aaKnown RBP23.82■■□□□ 1.4
YIF1A-212ENST00000528575 PPEF1O14829 653 aaPredicted RBP23.82■■□□□ 1.4
YIF1A-212ENST00000528575 PCCAP05165 728 aaPredicted RBP23.82■■□□□ 1.4
YIF1A-212ENST00000528575 HCLS1P14317 486 aaPredicted RBP23.82■■□□□ 1.4
YIF1A-212ENST00000528575 G2E3Q7L622 706 aa23.82■■□□□ 1.4
YIF1A-212ENST00000528575 DUOX1Q9NRD9 1551 aa23.82■■□□□ 1.4
YIF1A-212ENST00000528575 DNAAF4Q8WXU2 420 aa23.81■■□□□ 1.4
YIF1A-212ENST00000528575 CDCA7LQ96GN5 454 aa23.81■■□□□ 1.4
YIF1A-212ENST00000528575 COL13A1Q5TAT6 717 aaPredicted RBP23.8■■□□□ 1.4
YIF1A-212ENST00000528575 LINS1Q8NG48 757 aa23.8■■□□□ 1.4
YIF1A-212ENST00000528575 HNRNPUQ00839 825 aaKnown RBP eCLIP23.79■■□□□ 1.4
YIF1A-212ENST00000528575 SF3B3Q15393 1217 aaKnown RBP23.79■■□□□ 1.4
YIF1A-212ENST00000528575 TMC4Q7Z404 712 aa23.79■■□□□ 1.4
YIF1A-212ENST00000528575 LDHDQ86WU2 507 aa23.79■■□□□ 1.4
YIF1A-212ENST00000528575 FAM89AQ96GI7 184 aa23.79■■□□□ 1.4
YIF1A-212ENST00000528575 ATP6V0A2Q9Y487 856 aa23.79■■□□□ 1.4
YIF1A-212ENST00000528575 PTPRCP08575 1304 aa23.79■■□□□ 1.4
YIF1A-212ENST00000528575 CDHR2Q9BYE9 1310 aa23.79■■□□□ 1.4
YIF1A-212ENST00000528575 IQCA1LA6NCM1 817 aa23.78■■□□□ 1.4
YIF1A-212ENST00000528575 SCNN1DP51172 638 aa23.78■■□□□ 1.4
YIF1A-212ENST00000528575 LRRC37AA6NMS7 1700 aa23.77■■□□□ 1.4
YIF1A-212ENST00000528575 NEURL1BA8MQ27 555 aa23.77■■□□□ 1.4
YIF1A-212ENST00000528575 IRS4O14654 1257 aaPredicted RBP23.77■■□□□ 1.4
YIF1A-212ENST00000528575 BBOX1O75936 387 aa23.77■■□□□ 1.4
YIF1A-212ENST00000528575 IGKV5-2P06315 115 aa23.77■■□□□ 1.4
YIF1A-212ENST00000528575 EPHX2P34913 555 aa23.77■■□□□ 1.4
YIF1A-212ENST00000528575 DDX46Q7L014 1031 aaKnown RBP23.77■■□□□ 1.4
YIF1A-212ENST00000528575 GPC2Q8N158 579 aa23.77■■□□□ 1.4
YIF1A-212ENST00000528575 TMX4Q9H1E5 349 aaPredicted RBP23.77■■□□□ 1.4
YIF1A-212ENST00000528575 HACL1Q9UJ83 578 aa23.77■■□□□ 1.4
YIF1A-212ENST00000528575 RTFDC1Q9BY42 306 aaPredicted RBP23.76■■□□□ 1.39
YIF1A-212ENST00000528575 CREBZFQ9NS37 354 aa23.76■■□□□ 1.39
YIF1A-212ENST00000528575 ZBED9Q6R2W3 1325 aa23.76■■□□□ 1.39
YIF1A-212ENST00000528575 BRPF1P55201 1214 aaPredicted RBP23.75■■□□□ 1.39
YIF1A-212ENST00000528575 MRPL50Q8N5N7 158 aaKnown RBP23.75■■□□□ 1.39
YIF1A-212ENST00000528575 PDE8AO60658 829 aa23.74■■□□□ 1.39
YIF1A-212ENST00000528575 AOC3Q16853 763 aa23.74■■□□□ 1.39
YIF1A-212ENST00000528575 EPS15P42566 896 aa23.73■■□□□ 1.39
YIF1A-212ENST00000528575 FMR1Q06787 632 aaKnown RBP eCLIP23.73■■□□□ 1.39
YIF1A-212ENST00000528575 GRAPQ13588 217 aa23.73■■□□□ 1.39
YIF1A-212ENST00000528575 GCKRQ14397 625 aa23.73■■□□□ 1.39
YIF1A-212ENST00000528575 EAPPQ56P03 285 aaPredicted RBP23.73■■□□□ 1.39
YIF1A-212ENST00000528575 MAP1SQ66K74 1059 aaPredicted RBP23.73■■□□□ 1.39
YIF1A-212ENST00000528575 GRAPLQ8TC17 118 aaPredicted RBP23.73■■□□□ 1.39
YIF1A-212ENST00000528575 MKRN1Q9UHC7 482 aaKnown RBP23.73■■□□□ 1.39
YIF1A-212ENST00000528575 H7C1W4 665 aa23.72■■□□□ 1.39
YIF1A-212ENST00000528575 HSPA1AP0DMV8 641 aaKnown RBP23.72■■□□□ 1.39
YIF1A-212ENST00000528575 HSPA1BP0DMV9 641 aaKnown RBP23.72■■□□□ 1.39
YIF1A-212ENST00000528575 CCDC152Q4G0S7 254 aa23.72■■□□□ 1.39
YIF1A-212ENST00000528575 LARGE2Q8N3Y3 721 aa23.72■■□□□ 1.39
YIF1A-212ENST00000528575 SSH1Q8WYL5 1049 aa23.72■■□□□ 1.39
YIF1A-212ENST00000528575 CNTNAP1P78357 1384 aa23.72■■□□□ 1.39
YIF1A-212ENST00000528575 ALDH1L1O75891 902 aa23.71■■□□□ 1.39
YIF1A-212ENST00000528575 CWF19L2Q2TBE0 894 aaKnown RBP23.71■■□□□ 1.39
YIF1A-212ENST00000528575 BEND3Q5T5X7 828 aa23.71■■□□□ 1.39
YIF1A-212ENST00000528575 SP8Q8IXZ3 490 aa23.71■■□□□ 1.39
YIF1A-212ENST00000528575 JDP2Q8WYK2 163 aa23.71■■□□□ 1.39
YIF1A-212ENST00000528575 GJA3Q9Y6H8 435 aa23.71■■□□□ 1.39
YIF1A-212ENST00000528575 PLA2G12BQ9BX93 195 aa23.7■■□□□ 1.38
YIF1A-212ENST00000528575 VPS33BQ9H267 617 aa23.7■■□□□ 1.38
YIF1A-212ENST00000528575 SMC4Q9NTJ3 1288 aa23.7■■□□□ 1.38
YIF1A-212ENST00000528575 PPIP5K2O43314 1243 aa23.69■■□□□ 1.38
YIF1A-212ENST00000528575 CXCL9Q07325 125 aa23.69■■□□□ 1.38
YIF1A-212ENST00000528575 CELF1Q92879 486 aaKnown RBP23.69■■□□□ 1.38
YIF1A-212ENST00000528575 RTL9Q8NET4 1388 aa23.68■■□□□ 1.38
YIF1A-212ENST00000528575 YDJCA8MPS7 323 aa23.68■■□□□ 1.38
YIF1A-212ENST00000528575 EIF6P56537 245 aaKnown RBP23.68■■□□□ 1.38
YIF1A-212ENST00000528575 RTL5Q5HYW3 569 aaPredicted RBP23.68■■□□□ 1.38
YIF1A-212ENST00000528575 CNTROBQ8N137 903 aa23.68■■□□□ 1.38
YIF1A-212ENST00000528575 SRCIN1Q9C0H9 1055 aa23.67■■□□□ 1.38
YIF1A-212ENST00000528575 KIF16BQ96L93 1317 aa23.66■■□□□ 1.38
YIF1A-212ENST00000528575 F6X3S4 739 aa23.66■■□□□ 1.38
YIF1A-212ENST00000528575 CTSWP56202 376 aa23.66■■□□□ 1.38
YIF1A-212ENST00000528575 KIAA2012Q0VF49 1180 aa23.66■■□□□ 1.38
YIF1A-212ENST00000528575 PNMA8AQ86V59 439 aaPredicted RBP23.66■■□□□ 1.38
YIF1A-212ENST00000528575 NIM1KQ8IY84 436 aa23.66■■□□□ 1.38
YIF1A-212ENST00000528575 SUPT20HQ8NEM7 779 aa23.66■■□□□ 1.38
YIF1A-212ENST00000528575 SHTN1A0MZ66 631 aa23.65■■□□□ 1.38
YIF1A-212ENST00000528575 RARSP54136 660 aaKnown RBP23.65■■□□□ 1.38
YIF1A-212ENST00000528575 UBE3BQ7Z3V4 1068 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms