RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 IRS4O14654 1257 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-210ENST00000528441 VEGFAP15692 232 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-210ENST00000528441 EIF6P56537 245 aaKnown RBP11.61□□□□□ -0.55
CMTM1-210ENST00000528441 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
CMTM1-210ENST00000528441 CRY2Q49AN0 593 aa11.61□□□□□ -0.55
CMTM1-210ENST00000528441 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
CMTM1-210ENST00000528441 CCDC85AQ96PX6 553 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-210ENST00000528441 CRAMP1Q96RY5 1269 aa11.61□□□□□ -0.55
CMTM1-210ENST00000528441 CWC25Q9NXE8 425 aaPredicted RBP11.61□□□□□ -0.55
CMTM1-210ENST00000528441 GJA3Q9Y6H8 435 aa11.61□□□□□ -0.55
CMTM1-210ENST00000528441 RIC1Q4ADV7 1423 aa11.6□□□□□ -0.55
CMTM1-210ENST00000528441 PPIP5K2O43314 1243 aa11.6□□□□□ -0.55
CMTM1-210ENST00000528441 GRAPQ13588 217 aa11.6□□□□□ -0.55
CMTM1-210ENST00000528441 DPP8Q6V1X1 898 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-210ENST00000528441 NIM1KQ8IY84 436 aa11.6□□□□□ -0.55
CMTM1-210ENST00000528441 SUPT20HQ8NEM7 779 aa11.6□□□□□ -0.55
CMTM1-210ENST00000528441 GRAPLQ8TC17 118 aaPredicted RBP11.6□□□□□ -0.55
CMTM1-210ENST00000528441 ISCA1Q9BUE6 129 aa11.6□□□□□ -0.55
CMTM1-210ENST00000528441 LAMB2P55268 1798 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 PI4KAP2A4QPH2 592 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 G3V3G9 751 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 DDNO94850 711 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-210ENST00000528441 HSPA6P17066 643 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-210ENST00000528441 HOXA10P31260 410 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-210ENST00000528441 PRELPP51888 382 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 GRIPAP1Q4V328 841 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 EAPPQ56P03 285 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-210ENST00000528441 SLC10A5Q5PT55 438 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 KSR2Q6VAB6 950 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 MPNDQ8N594 471 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 PI4KAP1Q8N8J0 262 aa11.59□□□□□ -0.55
CMTM1-210ENST00000528441 JARID2Q92833 1246 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-210ENST00000528441 METTL22Q9BUU2 404 aaPredicted RBP11.59□□□□□ -0.55
CMTM1-210ENST00000528441 IQCA1LA6NCM1 817 aa11.58□□□□□ -0.56
CMTM1-210ENST00000528441 BBOX1O75936 387 aa11.58□□□□□ -0.56
CMTM1-210ENST00000528441 PRKAR2AP13861 404 aaKnown RBP11.58□□□□□ -0.56
CMTM1-210ENST00000528441 FLIIQ13045 1269 aa11.58□□□□□ -0.56
CMTM1-210ENST00000528441 ZBTB38Q8NAP3 1195 aaPredicted RBP11.58□□□□□ -0.56
CMTM1-210ENST00000528441 CCDC191Q8NCU4 936 aa11.58□□□□□ -0.56
CMTM1-210ENST00000528441 SMC1BQ8NDV3 1235 aa11.58□□□□□ -0.56
CMTM1-210ENST00000528441 RBM46Q8TBY0 533 aaKnown RBP11.58□□□□□ -0.56
CMTM1-210ENST00000528441 C6orf229H3BNL8 230 aa11.57□□□□□ -0.56
CMTM1-210ENST00000528441 AOC3Q16853 763 aa11.57□□□□□ -0.56
CMTM1-210ENST00000528441 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
CMTM1-210ENST00000528441 C7orf43Q8WVR3 580 aa11.57□□□□□ -0.56
CMTM1-210ENST00000528441 PSMD1Q99460 953 aa11.57□□□□□ -0.56
CMTM1-210ENST00000528441 NSFL1CQ9UNZ2 370 aaKnown RBP11.57□□□□□ -0.56
CMTM1-210ENST00000528441 CHMP3Q9Y3E7 222 aa11.57□□□□□ -0.56
CMTM1-210ENST00000528441 ATP6V0A2Q9Y487 856 aa11.57□□□□□ -0.56
CMTM1-210ENST00000528441 DDX60Q8IY21 1712 aaKnown RBP11.57□□□□□ -0.56
CMTM1-210ENST00000528441 PDE8AO60658 829 aa11.56□□□□□ -0.56
CMTM1-210ENST00000528441 CWF19L2Q2TBE0 894 aaKnown RBP11.56□□□□□ -0.56
CMTM1-210ENST00000528441 G2E3Q7L622 706 aa11.56□□□□□ -0.56
CMTM1-210ENST00000528441 TMC4Q7Z404 712 aa11.56□□□□□ -0.56
CMTM1-210ENST00000528441 ZNF541Q9H0D2 1346 aa11.56□□□□□ -0.56
CMTM1-210ENST00000528441 TAF1P21675 1872 aa11.55□□□□□ -0.56
CMTM1-210ENST00000528441 PCCAP05165 728 aaPredicted RBP11.55□□□□□ -0.56
CMTM1-210ENST00000528441 APLP1P51693 650 aa11.55□□□□□ -0.56
CMTM1-210ENST00000528441 FSTL1Q12841 308 aa11.55□□□□□ -0.56
CMTM1-210ENST00000528441 SLC4A10Q6U841 1118 aa11.55□□□□□ -0.56
CMTM1-210ENST00000528441 SP8Q8IXZ3 490 aa11.55□□□□□ -0.56
CMTM1-210ENST00000528441 DNAAF4Q8WXU2 420 aa11.55□□□□□ -0.56
CMTM1-210ENST00000528441 CELF1Q92879 486 aaKnown RBP11.55□□□□□ -0.56
CMTM1-210ENST00000528441 BCL2L13Q9BXK5 485 aa11.55□□□□□ -0.56
CMTM1-210ENST00000528441 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
CMTM1-210ENST00000528441 HACL1Q9UJ83 578 aa11.55□□□□□ -0.56
CMTM1-210ENST00000528441 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
CMTM1-210ENST00000528441 VAMP4O75379 141 aa11.54□□□□□ -0.56
CMTM1-210ENST00000528441 TRIM28Q13263 835 aaKnown RBP11.54□□□□□ -0.56
CMTM1-210ENST00000528441 DIEXFQ68CQ4 756 aaKnown RBP11.54□□□□□ -0.56
CMTM1-210ENST00000528441 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
CMTM1-210ENST00000528441 SLC51AQ86UW1 340 aa11.54□□□□□ -0.56
CMTM1-210ENST00000528441 ANKRD18AQ8IVF6 992 aa11.54□□□□□ -0.56
CMTM1-210ENST00000528441 CDC5LQ99459 802 aaKnown RBP11.54□□□□□ -0.56
CMTM1-210ENST00000528441 EYA3Q99504 573 aa11.54□□□□□ -0.56
CMTM1-210ENST00000528441 WDR90Q96KV7 1748 aa11.54□□□□□ -0.56
CMTM1-210ENST00000528441 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
CMTM1-210ENST00000528441 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
CMTM1-210ENST00000528441 E9PSI1 815 aa11.53□□□□□ -0.56
CMTM1-210ENST00000528441 CCER2I3L3R5 266 aa11.53□□□□□ -0.56
CMTM1-210ENST00000528441 IGHMBP2P38935 993 aaKnown RBP11.53□□□□□ -0.56
CMTM1-210ENST00000528441 RPS8P62241 208 aaKnown RBP11.53□□□□□ -0.56
CMTM1-210ENST00000528441 SF3B3Q15393 1217 aaKnown RBP11.53□□□□□ -0.56
CMTM1-210ENST00000528441 TAF7LQ5H9L4 462 aa11.53□□□□□ -0.56
CMTM1-210ENST00000528441 F6X3S4 739 aa11.52□□□□□ -0.57
CMTM1-210ENST00000528441 UFL1O94874 794 aa11.52□□□□□ -0.57
CMTM1-210ENST00000528441 EPHX2P34913 555 aa11.52□□□□□ -0.57
CMTM1-210ENST00000528441 CTSWP56202 376 aa11.52□□□□□ -0.57
CMTM1-210ENST00000528441 WASHC4Q2M389 1173 aa11.52□□□□□ -0.57
CMTM1-210ENST00000528441 GPC2Q8N158 579 aa11.52□□□□□ -0.57
CMTM1-210ENST00000528441 SEC31BQ9NQW1 1179 aa11.52□□□□□ -0.57
CMTM1-210ENST00000528441 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.57
CMTM1-210ENST00000528441 MYH3P11055 1940 aa11.52□□□□□ -0.57
CMTM1-210ENST00000528441 SPEF2Q9C093 1822 aa11.51□□□□□ -0.57
CMTM1-210ENST00000528441 FZD9O00144 591 aa11.51□□□□□ -0.57
CMTM1-210ENST00000528441 RAD17O75943 681 aa11.51□□□□□ -0.57
CMTM1-210ENST00000528441 IGKV5-2P06315 115 aa11.51□□□□□ -0.57
CMTM1-210ENST00000528441 KCNJ4P48050 445 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms