RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 NCOA7Q8NI08 942 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 CDC5LQ99459 802 aaKnown RBP8.33□□□□□ -1.08
CTNND1-218ENST00000528232 TRIM35Q9UPQ4 493 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 DMRT2Q9Y5R5 561 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 MAP3K19Q56UN5 1328 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 IQCA1Q86XH1 822 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 LINS1Q8NG48 757 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 CTCFLQ8NI51 663 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-218ENST00000528232 BMP2KQ9NSY1 1161 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-218ENST00000528232 CLASP1Q7Z460 1538 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 MPHOSPH10O00566 681 aaKnown RBP8.33□□□□□ -1.08
CTNND1-218ENST00000528232 TUBB4BP68371 445 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 LDHAL6AQ6ZMR3 332 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-218ENST00000528232 KIF18AQ8NI77 898 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 CNKSR2Q8WXI2 1034 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 CROCC2H7BZ55 1655 aa8.33□□□□□ -1.08
CTNND1-218ENST00000528232 CFAP65Q6ZU64 1925 aaKnown RBP8.33□□□□□ -1.08
CTNND1-218ENST00000528232 IFIT3O14879 490 aaKnown RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 CHRNA2Q15822 529 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 COPS6Q7L5N1 327 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 DZIP1Q86YF9 867 aaKnown RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 SEC63Q9UGP8 760 aaKnown RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 A0A1B0GUA9 196 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 GPTP24298 496 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 STX1AQ16623 288 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 ZSCAN23Q3MJ62 389 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 MYCBPQ99417 103 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 CAVIN2O95810 425 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 IL15P40933 162 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 RBM5P52756 815 aaKnown RBP eCLIP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 CCT2P78371 535 aaKnown RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 JAKMIP3Q5VZ66 844 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 MPNDQ8N594 471 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 SIRT1Q96EB6 747 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 SUDS3Q9H7L9 328 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 OGFRQ9NZT2 677 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 RAD50Q92878 1312 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 HECW2Q9P2P5 1572 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 RNMTO43148 476 aaKnown RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 POLR3DP05423 398 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 SLF2Q8IX21 1173 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 RBM8AQ9Y5S9 174 aaKnown RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 ERVK-7P63135 1459 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 MAGI2Q86UL8 1455 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 HOXB7P09629 217 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 SH3BGRP55822 239 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-218ENST00000528232 CFAP100Q494V2 611 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 MCMDC2Q4G0Z9 681 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 LRSAM1Q6UWE0 723 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 CATIPQ7Z7H3 387 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 MKNK2Q9HBH9 465 aa8.32□□□□□ -1.08
CTNND1-218ENST00000528232 FSIP1Q8NA03 581 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 AOX1Q06278 1338 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 EZRP15311 586 aaKnown RBP8.31□□□□□ -1.08
CTNND1-218ENST00000528232 GUCY1B3Q02153 619 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 UTP14CQ5TAP6 766 aaKnown RBP8.31□□□□□ -1.08
CTNND1-218ENST00000528232 LRRC59Q96AG4 307 aaKnown RBP8.31□□□□□ -1.08
CTNND1-218ENST00000528232 TANGO6Q9C0B7 1094 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 ANKIB1Q9P2G1 1089 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 USP16Q9Y5T5 823 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 RBM25P49756 843 aaKnown RBP8.31□□□□□ -1.08
CTNND1-218ENST00000528232 RAB3GAP1Q15042 981 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 SYCP1Q15431 976 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
CTNND1-218ENST00000528232 CLIP2Q9UDT6 1046 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 MRVI1Q9Y6F6 885 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 SFPQP23246 707 aaKnown RBP eCLIP8.31□□□□□ -1.081e-8■■■□□ 15.1
CTNND1-218ENST00000528232 SEPT7Q16181 437 aaKnown RBP8.31□□□□□ -1.08
CTNND1-218ENST00000528232 CCDC152Q4G0S7 254 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 KLHL34Q8N239 644 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 DCAF5Q96JK2 942 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 FAM135BQ49AJ0 1406 aa8.31□□□□□ -1.08
CTNND1-218ENST00000528232 RANBP6O60518 1105 aaKnown RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 METAP2P50579 478 aaKnown RBP eCLIP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 TMEM67Q5HYA8 995 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 C19orf44Q9H6X5 657 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 ZSCAN12O43309 604 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 IARSP41252 1262 aaKnown RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 NMIQ13287 307 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 SLC39A6Q13433 755 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 KIAA0232Q92628 1395 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 CHL1O00533 1208 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 GTF2F1P35269 517 aaKnown RBP eCLIP8.3□□□□□ -1.085e-6■■■□□ 17.8
CTNND1-218ENST00000528232 KRT24Q2M2I5 525 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 MFSD6Q6ZSS7 791 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 FMNL3Q8IVF7 1028 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 GDPD2Q9HCC8 539 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 EPB41L2O43491 1005 aaKnown RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 GCP02774 474 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 SPTY2D1Q68D10 685 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 DDX46Q7L014 1031 aaKnown RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 ZSCAN29Q8IWY8 852 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 MIPOL1Q8TD10 442 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 PYM1Q9BRP8 204 aaKnown RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 CRACR2AQ9BSW2 395 aa8.3□□□□□ -1.08
CTNND1-218ENST00000528232 RBM27Q9P2N5 1060 aaKnown RBP8.3□□□□□ -1.08
CTNND1-218ENST00000528232 ORC3Q9UBD5 711 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms