RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 A1BGP04217 495 aa18.38■□□□□ 0.53
USH1C-207ENST00000527720 EVA1CP58658 441 aa18.38■□□□□ 0.53
USH1C-207ENST00000527720 USPL1Q5W0Q7 1092 aa18.38■□□□□ 0.53
USH1C-207ENST00000527720 SYAP1Q96A49 352 aaPredicted RBP18.38■□□□□ 0.53
USH1C-207ENST00000527720 CPA1P15085 419 aa18.37■□□□□ 0.53
USH1C-207ENST00000527720 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
USH1C-207ENST00000527720 PPP1R9BQ96SB3 815 aa18.37■□□□□ 0.53
USH1C-207ENST00000527720 TMEM63CQ9P1W3 806 aa18.37■□□□□ 0.53
USH1C-207ENST00000527720 SYT1P21579 422 aa18.37■□□□□ 0.53
USH1C-207ENST00000527720 IL15P40933 162 aaPredicted RBP18.37■□□□□ 0.53
USH1C-207ENST00000527720 LRSAM1Q6UWE0 723 aa18.37■□□□□ 0.53
USH1C-207ENST00000527720 TEX13AQ9BXU3 409 aaPredicted RBP18.37■□□□□ 0.53
USH1C-207ENST00000527720 TAF5LO75529 589 aa18.36■□□□□ 0.53
USH1C-207ENST00000527720 KRT32Q14532 448 aa18.36■□□□□ 0.53
USH1C-207ENST00000527720 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
USH1C-207ENST00000527720 CHAMP1Q96JM3 812 aa18.36■□□□□ 0.53
USH1C-207ENST00000527720 DBNDD2Q9BQY9 259 aa18.36■□□□□ 0.53
USH1C-207ENST00000527720 LARGE1O95461 756 aa18.35■□□□□ 0.53
USH1C-207ENST00000527720 BLOC1S2Q6QNY1 142 aa18.35■□□□□ 0.53
USH1C-207ENST00000527720 ATG9AQ7Z3C6 839 aa18.35■□□□□ 0.53
USH1C-207ENST00000527720 STRN4Q9NRL3 753 aa18.35■□□□□ 0.53
USH1C-207ENST00000527720 PALLDQ8WX93 1383 aa18.35■□□□□ 0.53
USH1C-207ENST00000527720 CIAO1O76071 339 aa18.35■□□□□ 0.53
USH1C-207ENST00000527720 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
USH1C-207ENST00000527720 TRIM44Q96DX7 344 aaPredicted RBP18.35■□□□□ 0.53
USH1C-207ENST00000527720 RRAGDQ9NQL2 400 aaPredicted RBP18.35■□□□□ 0.53
USH1C-207ENST00000527720 TMOD3Q9NYL9 352 aa18.35■□□□□ 0.53
USH1C-207ENST00000527720 RBM27Q9P2N5 1060 aaKnown RBP18.35■□□□□ 0.53
USH1C-207ENST00000527720 F13A1P00488 732 aa18.34■□□□□ 0.53
USH1C-207ENST00000527720 CCDC83Q8IWF9 413 aa18.34■□□□□ 0.53
USH1C-207ENST00000527720 NSFL1CQ9UNZ2 370 aaKnown RBP18.34■□□□□ 0.53
USH1C-207ENST00000527720 CHMP3Q9Y3E7 222 aa18.34■□□□□ 0.53
USH1C-207ENST00000527720 GJB2P29033 226 aa18.34■□□□□ 0.53
USH1C-207ENST00000527720 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
USH1C-207ENST00000527720 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
USH1C-207ENST00000527720 RPS6KB1P23443 525 aa18.33■□□□□ 0.53
USH1C-207ENST00000527720 TRIM28Q13263 835 aaKnown RBP18.33■□□□□ 0.53
USH1C-207ENST00000527720 ME3Q16798 604 aa18.33■□□□□ 0.53
USH1C-207ENST00000527720 USP48Q86UV5 1035 aa18.33■□□□□ 0.53
USH1C-207ENST00000527720 KBTBD3Q8NAB2 608 aa18.33■□□□□ 0.53
USH1C-207ENST00000527720 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.53
USH1C-207ENST00000527720 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.53
USH1C-207ENST00000527720 FBXO3Q9UK99 471 aa18.33■□□□□ 0.53
USH1C-207ENST00000527720 SH3TC1Q8TE82 1336 aa18.33■□□□□ 0.52
USH1C-207ENST00000527720 ZNF609O15014 1411 aa18.33■□□□□ 0.52
USH1C-207ENST00000527720 PLCH1Q4KWH8 1693 aa18.33■□□□□ 0.52
USH1C-207ENST00000527720 EYA2O00167 538 aa18.33■□□□□ 0.52
USH1C-207ENST00000527720 PRIM1P49642 420 aaKnown RBP18.33■□□□□ 0.52
USH1C-207ENST00000527720 MCMDC2Q4G0Z9 681 aa18.33■□□□□ 0.52
USH1C-207ENST00000527720 EDC3Q96F86 508 aaKnown RBP18.33■□□□□ 0.52
USH1C-207ENST00000527720 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
USH1C-207ENST00000527720 LRP6O75581 1613 aa18.32■□□□□ 0.52
USH1C-207ENST00000527720 PHF14O94880 888 aa18.32■□□□□ 0.52
USH1C-207ENST00000527720 TCIRG1Q13488 830 aa18.32■□□□□ 0.52
USH1C-207ENST00000527720 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
USH1C-207ENST00000527720 TPCN1Q9ULQ1 816 aa18.32■□□□□ 0.52
USH1C-207ENST00000527720 LAMA4Q16363 1823 aa18.32■□□□□ 0.52
USH1C-207ENST00000527720 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
USH1C-207ENST00000527720 KLHL34Q8N239 644 aa18.32■□□□□ 0.52
USH1C-207ENST00000527720 ANKRD36CQ5JPF3 1778 aa18.31■□□□□ 0.52
USH1C-207ENST00000527720 CLCN1P35523 988 aa18.31■□□□□ 0.52
USH1C-207ENST00000527720 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.31■□□□□ 0.52
USH1C-207ENST00000527720 RBSNQ9H1K0 784 aa18.31■□□□□ 0.52
USH1C-207ENST00000527720 SYCE3A1L190 88 aa18.3■□□□□ 0.52
USH1C-207ENST00000527720 ST3GAL1Q11201 340 aa18.3■□□□□ 0.52
USH1C-207ENST00000527720 HELLSQ9NRZ9 838 aa18.3■□□□□ 0.52
USH1C-207ENST00000527720 MYH3P11055 1940 aa18.3■□□□□ 0.52
USH1C-207ENST00000527720 PDCP20941 246 aa18.3■□□□□ 0.52
USH1C-207ENST00000527720 PLA2G12BQ9BX93 195 aa18.3■□□□□ 0.52
USH1C-207ENST00000527720 MTMR6Q9Y217 621 aa18.3■□□□□ 0.52
USH1C-207ENST00000527720 WNK3Q9BYP7 1800 aa18.3■□□□□ 0.52
USH1C-207ENST00000527720 PAG1Q9NWQ8 432 aa18.29■□□□□ 0.52
USH1C-207ENST00000527720 DISP2A7MBM2 1401 aa18.29■□□□□ 0.52
USH1C-207ENST00000527720 ESPNB1AK53 854 aa18.29■□□□□ 0.52
USH1C-207ENST00000527720 UBE2HP62256 183 aa18.29■□□□□ 0.52
USH1C-207ENST00000527720 KIF6Q6ZMV9 814 aa18.29■□□□□ 0.52
USH1C-207ENST00000527720 NEUROD6Q96NK8 337 aa18.29■□□□□ 0.52
USH1C-207ENST00000527720 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.28■□□□□ 0.52
USH1C-207ENST00000527720 STARD3NLO95772 234 aa18.28■□□□□ 0.52
USH1C-207ENST00000527720 PCCAP05165 728 aaPredicted RBP18.28■□□□□ 0.52
USH1C-207ENST00000527720 TOB2Q14106 344 aaPredicted RBP18.28■□□□□ 0.52
USH1C-207ENST00000527720 DDX46Q7L014 1031 aaKnown RBP18.28■□□□□ 0.52
USH1C-207ENST00000527720 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
USH1C-207ENST00000527720 GADD45BO75293 160 aaPredicted RBP18.28■□□□□ 0.52
USH1C-207ENST00000527720 NEK1Q96PY6 1258 aa18.28■□□□□ 0.52
USH1C-207ENST00000527720 GDPD2Q9HCC8 539 aa18.28■□□□□ 0.52
USH1C-207ENST00000527720 MYH7P12883 1935 aa18.27■□□□□ 0.52
USH1C-207ENST00000527720 KDM4FA0A1W2PPD8 638 aa18.27■□□□□ 0.52
USH1C-207ENST00000527720 FOXD4L6Q3SYB3 417 aaPredicted RBP18.27■□□□□ 0.52
USH1C-207ENST00000527720 LRRC24Q50LG9 513 aa18.27■□□□□ 0.52
USH1C-207ENST00000527720 FOXD4L3Q6VB84 417 aaPredicted RBP18.27■□□□□ 0.52
USH1C-207ENST00000527720 PIGBQ92521 554 aa18.27■□□□□ 0.52
USH1C-207ENST00000527720 COL22A1Q8NFW1 1626 aaPredicted RBP18.27■□□□□ 0.51
USH1C-207ENST00000527720 LETM1O95202 739 aaPredicted RBP18.26■□□□□ 0.51
USH1C-207ENST00000527720 CCDC57Q2TAC2 916 aa18.26■□□□□ 0.51
USH1C-207ENST00000527720 NECAB1Q8N987 351 aa18.26■□□□□ 0.51
USH1C-207ENST00000527720 DSCC1Q9BVC3 393 aa18.26■□□□□ 0.51
USH1C-207ENST00000527720 AKAP2Q9Y2D5 859 aa18.26■□□□□ 0.51
USH1C-207ENST00000527720 NDUFB9Q9Y6M9 179 aa18.26■□□□□ 0.51
USH1C-207ENST00000527720 A0A1B0GUL7 405 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms