RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
CAPN1-210ENST00000527699 PPEF1O14829 653 aaPredicted RBP13.05□□□□□ -0.32
CAPN1-210ENST00000527699 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
CAPN1-210ENST00000527699 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
CAPN1-210ENST00000527699 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
CAPN1-210ENST00000527699 CCDC102AQ96A19 550 aa13.05□□□□□ -0.32
CAPN1-210ENST00000527699 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
CAPN1-210ENST00000527699 ADARB2Q9NS39 739 aaKnown RBP13.05□□□□□ -0.32
CAPN1-210ENST00000527699 LAMB4A4D0S4 1761 aa13.04□□□□□ -0.32
CAPN1-210ENST00000527699 FAM155AB1AL88 458 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-210ENST00000527699 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
CAPN1-210ENST00000527699 NTSR2O95665 410 aa13.04□□□□□ -0.32
CAPN1-210ENST00000527699 RIPK4P57078 832 aa13.04□□□□□ -0.32
CAPN1-210ENST00000527699 AOC3Q16853 763 aa13.04□□□□□ -0.32
CAPN1-210ENST00000527699 CCDC146Q8IYE0 955 aa13.04□□□□□ -0.32
CAPN1-210ENST00000527699 ZNF296Q8WUU4 475 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-210ENST00000527699 LAS1LQ9Y4W2 734 aaKnown RBP13.04□□□□□ -0.32
CAPN1-210ENST00000527699 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
CAPN1-210ENST00000527699 KIAA0100Q14667 2235 aaKnown RBP13.04□□□□□ -0.32
CAPN1-210ENST00000527699 CRY2Q49AN0 593 aa13.03□□□□□ -0.32
CAPN1-210ENST00000527699 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
CAPN1-210ENST00000527699 ZNF34Q8IZ26 560 aa13.03□□□□□ -0.32
CAPN1-210ENST00000527699 PSMD1Q99460 953 aa13.03□□□□□ -0.32
CAPN1-210ENST00000527699 NUP98P52948 1817 aa13.03□□□□□ -0.32
CAPN1-210ENST00000527699 COL6A3P12111 3177 aa13.03□□□□□ -0.32
CAPN1-210ENST00000527699 PPIP5K2O43314 1243 aa13.02□□□□□ -0.33
CAPN1-210ENST00000527699 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-210ENST00000527699 KRT24Q2M2I5 525 aa13.02□□□□□ -0.33
CAPN1-210ENST00000527699 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
CAPN1-210ENST00000527699 CDC37L1Q7L3B6 337 aa13.02□□□□□ -0.33
CAPN1-210ENST00000527699 PPP1R42Q7Z4L9 355 aa13.02□□□□□ -0.33
CAPN1-210ENST00000527699 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
CAPN1-210ENST00000527699 CSRNP1Q96S65 589 aa13.02□□□□□ -0.33
CAPN1-210ENST00000527699 TBC1D8O95759 1140 aa13.01□□□□□ -0.33
CAPN1-210ENST00000527699 PDIA6Q15084 440 aa13.01□□□□□ -0.33
CAPN1-210ENST00000527699 C2orf69Q8N8R5 385 aa13.01□□□□□ -0.33
CAPN1-210ENST00000527699 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
CAPN1-210ENST00000527699 PAPPA2Q9BXP8 1791 aa13.01□□□□□ -0.33
CAPN1-210ENST00000527699 SNED1Q8TER0 1413 aa13□□□□□ -0.33
CAPN1-210ENST00000527699 H0YGN5 161 aa13□□□□□ -0.33
CAPN1-210ENST00000527699 COPS6Q7L5N1 327 aa13□□□□□ -0.33
CAPN1-210ENST00000527699 USP48Q86UV5 1035 aa13□□□□□ -0.33
CAPN1-210ENST00000527699 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
CAPN1-210ENST00000527699 NLRP3Q96P20 1036 aa13□□□□□ -0.33
CAPN1-210ENST00000527699 CRAMP1Q96RY5 1269 aa13□□□□□ -0.33
CAPN1-210ENST00000527699 GBA2Q9HCG7 927 aaPredicted RBP13□□□□□ -0.33
CAPN1-210ENST00000527699 GPRC5DQ9NZD1 345 aa13□□□□□ -0.33
CAPN1-210ENST00000527699 ABCC4O15439 1325 aa12.99□□□□□ -0.33
CAPN1-210ENST00000527699 RGL2O15211 777 aa12.99□□□□□ -0.33
CAPN1-210ENST00000527699 RAD17O75943 681 aa12.99□□□□□ -0.33
CAPN1-210ENST00000527699 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-210ENST00000527699 HOXA10P31260 410 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-210ENST00000527699 MPNDQ8N594 471 aa12.99□□□□□ -0.33
CAPN1-210ENST00000527699 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
CAPN1-210ENST00000527699 COL25A1Q9BXS0 654 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-210ENST00000527699 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
CAPN1-210ENST00000527699 TMPOP42166 694 aaKnown RBP12.98□□□□□ -0.33
CAPN1-210ENST00000527699 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
CAPN1-210ENST00000527699 RTL5Q5HYW3 569 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-210ENST00000527699 INTS3Q68E01 1043 aaKnown RBP12.98□□□□□ -0.33
CAPN1-210ENST00000527699 CC2D2BQ6DHV5 1058 aa12.98□□□□□ -0.33
CAPN1-210ENST00000527699 DLK2Q6UY11 383 aa12.98□□□□□ -0.33
CAPN1-210ENST00000527699 LRP10Q7Z4F1 713 aa12.98□□□□□ -0.33
CAPN1-210ENST00000527699 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-210ENST00000527699 PNNQ9H307 717 aaKnown RBP12.98□□□□□ -0.33
CAPN1-210ENST00000527699 SLC10A3P09131 477 aa12.97□□□□□ -0.33
CAPN1-210ENST00000527699 GMPSP49915 693 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-210ENST00000527699 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
CAPN1-210ENST00000527699 RBM27Q9P2N5 1060 aaKnown RBP12.97□□□□□ -0.33
CAPN1-210ENST00000527699 TRMT112Q9UI30 125 aaKnown RBP12.97□□□□□ -0.33
CAPN1-210ENST00000527699 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
CAPN1-210ENST00000527699 ATP5J2-PTCD1G3V325 749 aa12.96□□□□□ -0.33
CAPN1-210ENST00000527699 CXCL9Q07325 125 aa12.96□□□□□ -0.33
CAPN1-210ENST00000527699 DDX10Q13206 875 aaKnown RBP12.96□□□□□ -0.33
CAPN1-210ENST00000527699 NLRP10Q86W26 655 aa12.96□□□□□ -0.33
CAPN1-210ENST00000527699 REM2Q8IYK8 340 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-210ENST00000527699 BCL2L13Q9BXK5 485 aa12.96□□□□□ -0.33
CAPN1-210ENST00000527699 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.34
CAPN1-210ENST00000527699 IBTKQ9P2D0 1353 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-210ENST00000527699 GPR25O00155 361 aa12.95□□□□□ -0.34
CAPN1-210ENST00000527699 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
CAPN1-210ENST00000527699 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
CAPN1-210ENST00000527699 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
CAPN1-210ENST00000527699 CHPF2Q9P2E5 772 aa12.95□□□□□ -0.34
CAPN1-210ENST00000527699 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
CAPN1-210ENST00000527699 FKTNO75072 461 aa12.94□□□□□ -0.34
CAPN1-210ENST00000527699 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
CAPN1-210ENST00000527699 SLC10A5Q5PT55 438 aa12.94□□□□□ -0.34
CAPN1-210ENST00000527699 PGAP2Q9UHJ9 254 aa12.94□□□□□ -0.34
CAPN1-210ENST00000527699 ZNRF3Q9ULT6 936 aa12.94□□□□□ -0.34
CAPN1-210ENST00000527699 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-210ENST00000527699 TAF1P21675 1872 aa12.93□□□□□ -0.34
CAPN1-210ENST00000527699 RBM26Q5T8P6 1007 aaKnown RBP12.93□□□□□ -0.34
CAPN1-210ENST00000527699 SP8Q8IXZ3 490 aa12.93□□□□□ -0.34
CAPN1-210ENST00000527699 SUPT20HQ8NEM7 779 aa12.93□□□□□ -0.34
CAPN1-210ENST00000527699 TRPM4Q8TD43 1214 aa12.93□□□□□ -0.34
CAPN1-210ENST00000527699 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
CAPN1-210ENST00000527699 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
CAPN1-210ENST00000527699 TRIM17Q9Y577 477 aa12.93□□□□□ -0.34
CAPN1-210ENST00000527699 RBBP6Q7Z6E9 1792 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms