RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 DRC1Q96MC2 740 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 PDZRN3Q9UPQ7 1066 aa8.33□□□□□ -1.08
CTNND1-216ENST00000527467 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
CTNND1-216ENST00000527467 ABCC1P33527 1531 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 ZBED9Q6R2W3 1325 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 MIER3Q7Z3K6 550 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 FMNL3Q8IVF7 1028 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 TBC1D2BQ9UPU7 963 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 AIMP1Q12904 312 aaKnown RBP8.32□□□□□ -1.08
CTNND1-216ENST00000527467 CCDC96Q2M329 555 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 AP1ARQ63HQ0 302 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 CTAGE6Q86UF2 777 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 BANK1Q8NDB2 785 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 STMN2Q93045 179 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 NEUROD6Q96NK8 337 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 MYBBP1AQ9BQG0 1328 aaKnown RBP8.32□□□□□ -1.08
CTNND1-216ENST00000527467 GIGYF1O75420 1035 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-216ENST00000527467 SSBP05455 408 aaKnown RBP eCLIP8.32□□□□□ -1.081e-7■■■■■ 26.8
CTNND1-216ENST00000527467 CAPN2P17655 700 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 MVPQ14764 893 aaKnown RBP8.32□□□□□ -1.08
CTNND1-216ENST00000527467 WHAMMP3Q1A5X7 153 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 FERMT1Q9BQL6 677 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 ERVK-7P63135 1459 aa8.32□□□□□ -1.08
CTNND1-216ENST00000527467 YEATS4O95619 227 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 ERCC3P19447 782 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 MAP3K7CLP57077 242 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 NAA16Q6N069 864 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-216ENST00000527467 CCDC77Q9BR77 488 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 VCXQ9H320 206 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 GPBP1L1Q9HC44 474 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-216ENST00000527467 CCNL1Q9UK58 526 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-216ENST00000527467 PAXBP1Q9Y5B6 917 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 MCM4P33991 863 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 GSDMDP57764 484 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 LARP1BQ659C4 914 aaKnown RBP8.31□□□□□ -1.08
CTNND1-216ENST00000527467 ZCRB1Q8TBF4 217 aaKnown RBP8.31□□□□□ -1.08
CTNND1-216ENST00000527467 ARFGAP3Q9NP61 516 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 CCDC7Q96M83 1385 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 NDC80O14777 642 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 CHMP2AO43633 222 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 ACTN2P35609 894 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 DNA2P51530 1060 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 DIXDC1Q155Q3 683 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 CEP128Q6ZU80 1094 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 DDX27Q96GQ7 796 aaKnown RBP8.31□□□□□ -1.08
CTNND1-216ENST00000527467 PPP1R12CQ9BZL4 782 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 CYP46A1Q9Y6A2 500 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 ARHGEF12Q9NZN5 1544 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 TTLL12Q14166 644 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-216ENST00000527467 WAPLQ7Z5K2 1190 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 C16orf45Q96MC5 204 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-216ENST00000527467 PSMD1Q99460 953 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 ANO10Q9NW15 660 aa8.31□□□□□ -1.08
CTNND1-216ENST00000527467 CCDC171Q6TFL3 1326 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 ABCC5O15440 1437 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 FAM135BQ49AJ0 1406 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 GMNNO75496 209 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 CIB2O75838 187 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 EIF2S2P20042 333 aaKnown RBP8.3□□□□□ -1.08
CTNND1-216ENST00000527467 FKBP5Q13451 457 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-216ENST00000527467 ZNF365Q70YC5 407 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 K7ELQ4 463 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-216ENST00000527467 PRC1O43663 620 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 SPTY2D1Q68D10 685 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-216ENST00000527467 RPGRQ92834 1020 aaKnown RBP8.3□□□□□ -1.08
CTNND1-216ENST00000527467 ZMYM4Q5VZL5 1548 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 LTKP29376 864 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 MATR3P43243 847 aaKnown RBP eCLIP8.3□□□□□ -1.086e-7■■■■□ 22.1
CTNND1-216ENST00000527467 CHRNA2Q15822 529 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 BRINP3Q76B58 766 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 ARFGAP2Q8N6H7 521 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 TMOD2Q9NZR1 351 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 CLIP2Q9UDT6 1046 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 SAMD9LQ8IVG5 1584 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 KDM2BQ8NHM5 1336 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 ATP11AP98196 1134 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 KIAA0753Q2KHM9 967 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 WDR63Q8IWG1 891 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 NUF2Q9BZD4 464 aa8.3□□□□□ -1.08
CTNND1-216ENST00000527467 FER1L4A9Z1Z3 1794 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 ST20-MTHFSA0A0A6YYL1 179 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 CDKL5O76039 1030 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 FGFR1OPO95684 399 aaKnown RBP8.29□□□□□ -1.08
CTNND1-216ENST00000527467 MTHFSP49914 203 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 TRAPPC3LQ5T215 181 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 LRCH2Q5VUJ6 765 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 RUFY3Q7L099 469 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 EHBP1Q8NDI1 1231 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 IFT74Q96LB3 600 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 TSG101Q99816 390 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 CABP1Q9NZU7 370 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 MAP3K4Q9Y6R4 1608 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 NKTRP30414 1462 aaKnown RBP8.29□□□□□ -1.08
CTNND1-216ENST00000527467 SNW1Q13573 536 aaKnown RBP8.29□□□□□ -1.08
CTNND1-216ENST00000527467 VPS72Q15906 364 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 NBPF11Q86T75 865 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 CCDC50Q8IVM0 306 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 LRRC43Q8N309 656 aa8.29□□□□□ -1.08
CTNND1-216ENST00000527467 SMC1BQ8NDV3 1235 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms