RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 AKTIPQ9H8T0 292 aa6.35□□□□□ -1.39
CLNS1A-209ENST00000527299 C11orf16Q9NQ32 467 aa6.35□□□□□ -1.39
CLNS1A-209ENST00000527299 MKRN1Q9UHC7 482 aaKnown RBP6.35□□□□□ -1.39
CLNS1A-209ENST00000527299 ATP9BO43861 1147 aa6.34□□□□□ -1.39
CLNS1A-209ENST00000527299 INPP5BP32019 993 aa6.34□□□□□ -1.39
CLNS1A-209ENST00000527299 GPLD1P80108 840 aa6.34□□□□□ -1.39
CLNS1A-209ENST00000527299 WWC1Q8IX03 1113 aa6.34□□□□□ -1.39
CLNS1A-209ENST00000527299 ALX3O95076 343 aa6.33□□□□□ -1.4
CLNS1A-209ENST00000527299 YBX3P16989 372 aaKnown RBP eCLIP6.33□□□□□ -1.4
CLNS1A-209ENST00000527299 TARSP26639 723 aaKnown RBP6.33□□□□□ -1.4
CLNS1A-209ENST00000527299 CHMP7Q8WUX9 453 aaPredicted RBP6.33□□□□□ -1.4
CLNS1A-209ENST00000527299 IFT43Q96FT9 208 aa6.33□□□□□ -1.4
CLNS1A-209ENST00000527299 ZNF594Q96JF6 807 aaPredicted RBP6.33□□□□□ -1.4
CLNS1A-209ENST00000527299 MRPL18Q9H0U6 180 aaKnown RBP6.33□□□□□ -1.4
CLNS1A-209ENST00000527299 KIAA1324LA8MWY0 1029 aaPredicted RBP6.32□□□□□ -1.4
CLNS1A-209ENST00000527299 F8W735 103 aaPredicted RBP6.32□□□□□ -1.4
CLNS1A-209ENST00000527299 IDH3AP50213 366 aa6.32□□□□□ -1.4
CLNS1A-209ENST00000527299 IRAK1P51617 712 aa6.32□□□□□ -1.4
CLNS1A-209ENST00000527299 MLLT1Q03111 559 aaPredicted RBP6.32□□□□□ -1.4
CLNS1A-209ENST00000527299 Q6ZS46 218 aa6.32□□□□□ -1.4
CLNS1A-209ENST00000527299 SMG9Q9H0W8 520 aaKnown RBP6.32□□□□□ -1.4
CLNS1A-209ENST00000527299 RBM19Q9Y4C8 960 aaKnown RBP6.32□□□□□ -1.4
CLNS1A-209ENST00000527299 POM121CA8CG34 1229 aa6.31□□□□□ -1.4
CLNS1A-209ENST00000527299 MED26O95402 600 aa6.31□□□□□ -1.4
CLNS1A-209ENST00000527299 RARAP10276 462 aa6.31□□□□□ -1.4
CLNS1A-209ENST00000527299 KRT25Q7Z3Z0 450 aa6.31□□□□□ -1.4
CLNS1A-209ENST00000527299 POM121Q96HA1 1249 aa6.31□□□□□ -1.4
CLNS1A-209ENST00000527299 COBLO75128 1261 aa6.3□□□□□ -1.4
CLNS1A-209ENST00000527299 SASH3O75995 380 aa6.3□□□□□ -1.4
CLNS1A-209ENST00000527299 TAL1P17542 331 aaPredicted RBP6.3□□□□□ -1.4
CLNS1A-209ENST00000527299 NRLP54845 237 aa6.3□□□□□ -1.4
CLNS1A-209ENST00000527299 SEC13P55735 322 aa6.3□□□□□ -1.4
CLNS1A-209ENST00000527299 OAS3Q9Y6K5 1087 aaKnown RBP6.3□□□□□ -1.4
CLNS1A-209ENST00000527299 GSC2O15499 205 aa6.29□□□□□ -1.4
CLNS1A-209ENST00000527299 ARSDP51689 593 aa6.29□□□□□ -1.4
CLNS1A-209ENST00000527299 GP2P55259 537 aaKnown RBP6.29□□□□□ -1.4
CLNS1A-209ENST00000527299 HDGFL1Q5TGJ6 251 aa6.29□□□□□ -1.4
CLNS1A-209ENST00000527299 HFE2Q6ZVN8 426 aa6.29□□□□□ -1.4
CLNS1A-209ENST00000527299 SRA1Q9HD15 236 aaKnown RBP6.29□□□□□ -1.4
CLNS1A-209ENST00000527299 KLK14Q9P0G3 267 aa6.29□□□□□ -1.4
CLNS1A-209ENST00000527299 RAXQ9Y2V3 346 aa6.29□□□□□ -1.4
CLNS1A-209ENST00000527299 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
CLNS1A-209ENST00000527299 EIF2AK2P19525 551 aaKnown RBP6.28□□□□□ -1.4
CLNS1A-209ENST00000527299 IGFBP4P22692 258 aa6.28□□□□□ -1.4
CLNS1A-209ENST00000527299 ARID4AP29374 1257 aaPredicted RBP6.28□□□□□ -1.4
CLNS1A-209ENST00000527299 SETDB1Q15047 1291 aa6.28□□□□□ -1.4
CLNS1A-209ENST00000527299 PLD4Q96BZ4 506 aa6.28□□□□□ -1.4
CLNS1A-209ENST00000527299 TLR7Q9NYK1 1049 aaKnown RBP6.28□□□□□ -1.4
CLNS1A-209ENST00000527299 ARID1BQ8NFD5 2236 aaPredicted RBP6.27□□□□□ -1.4
CLNS1A-209ENST00000527299 PTCD1O75127 700 aaKnown RBP6.27□□□□□ -1.41
CLNS1A-209ENST00000527299 MICAL2O94851 1124 aa6.27□□□□□ -1.41
CLNS1A-209ENST00000527299 EGFRP00533 1210 aa6.27□□□□□ -1.41
CLNS1A-209ENST00000527299 TGFB1P01137 390 aa6.27□□□□□ -1.41
CLNS1A-209ENST00000527299 RASA1P20936 1047 aa6.27□□□□□ -1.41
CLNS1A-209ENST00000527299 LCE1DQ5T752 114 aa6.27□□□□□ -1.41
CLNS1A-209ENST00000527299 MAP4K3Q8IVH8 894 aa6.27□□□□□ -1.41
CLNS1A-209ENST00000527299 DCAF11Q8TEB1 546 aa6.27□□□□□ -1.41
CLNS1A-209ENST00000527299 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
CLNS1A-209ENST00000527299 LOC102724428A0A0B4J2F2 783 aa6.26□□□□□ -1.41
CLNS1A-209ENST00000527299 SIK1P57059 783 aa6.26□□□□□ -1.41
CLNS1A-209ENST00000527299 DGKZQ13574 1117 aa6.26□□□□□ -1.41
CLNS1A-209ENST00000527299 AGGF1Q8N302 714 aaeCLIP6.26□□□□□ -1.411e-6■□□□□ 8.2
CLNS1A-209ENST00000527299 IL22RA1Q8N6P7 574 aa6.26□□□□□ -1.41
CLNS1A-209ENST00000527299 STOML1Q9UBI4 398 aa6.26□□□□□ -1.41
CLNS1A-209ENST00000527299 J3QW42 95 aa6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 GLB1P16278 677 aa6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 SPINK2P20155 84 aa6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 GDF6Q6KF10 455 aaPredicted RBP6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 ZDHHC13Q8IUH4 622 aa6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 UBL7Q96S82 380 aaPredicted RBP6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 HINFPQ9BQA5 517 aa6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 QTRT2Q9H974 415 aaKnown RBP6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 RNF114Q9Y508 228 aa6.25□□□□□ -1.41
CLNS1A-209ENST00000527299 OPLAHO14841 1288 aa6.24□□□□□ -1.41
CLNS1A-209ENST00000527299 RAD21O60216 631 aa6.24□□□□□ -1.41
CLNS1A-209ENST00000527299 ADAMTS4O75173 837 aa6.24□□□□□ -1.41
CLNS1A-209ENST00000527299 LGR5O75473 907 aa6.24□□□□□ -1.41
CLNS1A-209ENST00000527299 HOXD8P13378 290 aaPredicted RBP6.24□□□□□ -1.41
CLNS1A-209ENST00000527299 RTCBQ9Y3I0 505 aaKnown RBP6.24□□□□□ -1.41
CLNS1A-209ENST00000527299 GHRHP01286 108 aa6.23□□□□□ -1.41
CLNS1A-209ENST00000527299 PTK7Q13308 1070 aa6.23□□□□□ -1.41
CLNS1A-209ENST00000527299 C11orf91Q3C1V1 193 aa6.23□□□□□ -1.41
CLNS1A-209ENST00000527299 INTS5Q6P9B9 1019 aaKnown RBP6.23□□□□□ -1.41
CLNS1A-209ENST00000527299 CACTIN-AS1Q8N1I8 211 aa6.23□□□□□ -1.41
CLNS1A-209ENST00000527299 ARMC10Q8N2F6 343 aa6.23□□□□□ -1.41
CLNS1A-209ENST00000527299 MYO19Q96H55 970 aa6.23□□□□□ -1.41
CLNS1A-209ENST00000527299 USP20Q9Y2K6 914 aa6.23□□□□□ -1.41
CLNS1A-209ENST00000527299 DHX15O43143 795 aaKnown RBP6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 MMP20O60882 483 aa6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 XYLBO75191 536 aa6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 PSAPP07602 524 aa6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 SOX18P35713 384 aa6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 NFIAQ12857 509 aa6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 FZD5Q13467 585 aa6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 CRTC2Q53ET0 693 aaPredicted RBP6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 LARP1Q6PKG0 1096 aaKnown RBP6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 MUC3BQ9H195 1237 aa6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 TFIP11Q9UBB9 837 aaKnown RBP6.22□□□□□ -1.41
CLNS1A-209ENST00000527299 MAFBQ9Y5Q3 323 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms