RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 SOX10P56693 466 aa9.01□□□□□ -0.97
CSTF3-207ENST00000526480 RASSF7Q02833 373 aa9.01□□□□□ -0.97
CSTF3-207ENST00000526480 MTMR2Q13614 643 aa9.01□□□□□ -0.97
CSTF3-207ENST00000526480 DLL1O00548 723 aa9□□□□□ -0.97
CSTF3-207ENST00000526480 AP1G2O75843 785 aa9□□□□□ -0.97
CSTF3-207ENST00000526480 IL2RBP14784 551 aa9□□□□□ -0.97
CSTF3-207ENST00000526480 DCAF5Q96JK2 942 aa9□□□□□ -0.97
CSTF3-207ENST00000526480 PASKQ96RG2 1323 aa9□□□□□ -0.97
CSTF3-207ENST00000526480 ADAMTSL1Q8N6G6 1762 aa8.99□□□□□ -0.97
CSTF3-207ENST00000526480 GLTPD2A6NH11 291 aa8.99□□□□□ -0.97
CSTF3-207ENST00000526480 MORN1Q5T089 497 aa8.99□□□□□ -0.97
CSTF3-207ENST00000526480 MTMR14Q8NCE2 650 aa8.99□□□□□ -0.97
CSTF3-207ENST00000526480 FLAD1Q8NFF5 587 aa8.99□□□□□ -0.97
CSTF3-207ENST00000526480 TRPM7Q96QT4 1865 aa8.98□□□□□ -0.97
CSTF3-207ENST00000526480 C6orf229H3BNL8 230 aa8.98□□□□□ -0.97
CSTF3-207ENST00000526480 MMP10P09238 476 aa8.98□□□□□ -0.97
CSTF3-207ENST00000526480 USP17L8P0C7I0 530 aa8.98□□□□□ -0.97
CSTF3-207ENST00000526480 TGFB2P61812 414 aa8.98□□□□□ -0.97
CSTF3-207ENST00000526480 PUS10Q3MIT2 529 aaKnown RBP8.98□□□□□ -0.97
CSTF3-207ENST00000526480 DDX54Q8TDD1 881 aaKnown RBP8.98□□□□□ -0.97
CSTF3-207ENST00000526480 POM121Q96HA1 1249 aa8.98□□□□□ -0.97
CSTF3-207ENST00000526480 CDK19Q9BWU1 502 aa8.98□□□□□ -0.97
CSTF3-207ENST00000526480 SCN4AP35499 1836 aa8.98□□□□□ -0.97
CSTF3-207ENST00000526480 USP47Q96K76 1375 aa8.98□□□□□ -0.97
CSTF3-207ENST00000526480 AFDNP55196 1824 aaKnown RBP8.97□□□□□ -0.97
CSTF3-207ENST00000526480 HABP4Q5JVS0 413 aaKnown RBP8.97□□□□□ -0.97
CSTF3-207ENST00000526480 PCDHB3Q9Y5E6 796 aa8.97□□□□□ -0.97
CSTF3-207ENST00000526480 CACNA1SQ13698 1873 aa8.97□□□□□ -0.97
CSTF3-207ENST00000526480 FER1L6Q2WGJ9 1857 aa8.97□□□□□ -0.97
CSTF3-207ENST00000526480 CFAP99D6REC4 459 aa8.96□□□□□ -0.98
CSTF3-207ENST00000526480 RAD21O60216 631 aa8.96□□□□□ -0.98
CSTF3-207ENST00000526480 KCNC4Q03721 635 aa8.96□□□□□ -0.98
CSTF3-207ENST00000526480 NLRP2Q9NX02 1062 aa8.96□□□□□ -0.98
CSTF3-207ENST00000526480 SLC27A5Q9Y2P5 690 aa8.96□□□□□ -0.98
CSTF3-207ENST00000526480 COG6Q9Y2V7 657 aa8.96□□□□□ -0.98
CSTF3-207ENST00000526480 ZC3H4Q9UPT8 1303 aaKnown RBP8.96□□□□□ -0.98
CSTF3-207ENST00000526480 RAB3GAP2Q9H2M9 1393 aa8.96□□□□□ -0.98
CSTF3-207ENST00000526480 UNC80Q8N2C7 3258 aa8.95□□□□□ -0.98
CSTF3-207ENST00000526480 APBB1O00213 710 aa8.95□□□□□ -0.98
CSTF3-207ENST00000526480 TRAK2O60296 914 aa8.95□□□□□ -0.98
CSTF3-207ENST00000526480 COPS2P61201 443 aa8.95□□□□□ -0.98
CSTF3-207ENST00000526480 Q3C1V9 767 aa8.95□□□□□ -0.98
CSTF3-207ENST00000526480 HELBQ8NG08 1087 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-207ENST00000526480 SYMPKQ92797 1274 aaKnown RBP8.95□□□□□ -0.98
CSTF3-207ENST00000526480 MTRQ99707 1265 aa8.95□□□□□ -0.98
CSTF3-207ENST00000526480 TRIOBPQ9H2D6 2365 aa8.95□□□□□ -0.98
CSTF3-207ENST00000526480 WDR33Q9C0J8 1336 aaKnown RBP8.95□□□□□ -0.98
CSTF3-207ENST00000526480 MYH14Q7Z406 1995 aaKnown RBP8.94□□□□□ -0.98
CSTF3-207ENST00000526480 RASSF10A6NK89 507 aa8.94□□□□□ -0.98
CSTF3-207ENST00000526480 TMEM88BA6NKF7 163 aa8.94□□□□□ -0.98
CSTF3-207ENST00000526480 FXR1P51114 621 aaKnown RBP eCLIP8.94□□□□□ -0.98
CSTF3-207ENST00000526480 MAP2K1Q02750 393 aaPredicted RBP8.94□□□□□ -0.98
CSTF3-207ENST00000526480 DGKZQ13574 1117 aa8.94□□□□□ -0.98
CSTF3-207ENST00000526480 RETREG3Q86VR2 466 aa8.94□□□□□ -0.98
CSTF3-207ENST00000526480 IL21Q9HBE4 155 aa8.94□□□□□ -0.98
CSTF3-207ENST00000526480 PALLDQ8WX93 1383 aa8.94□□□□□ -0.98
CSTF3-207ENST00000526480 NSD3Q9BZ95 1437 aa8.94□□□□□ -0.98
CSTF3-207ENST00000526480 COL5A3P25940 1745 aaPredicted RBP8.94□□□□□ -0.98
CSTF3-207ENST00000526480 CEP290O15078 2479 aa8.93□□□□□ -0.98
CSTF3-207ENST00000526480 CTDSPL2Q05D32 466 aa8.93□□□□□ -0.98
CSTF3-207ENST00000526480 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
CSTF3-207ENST00000526480 PRR7Q8TB68 274 aa8.93□□□□□ -0.98
CSTF3-207ENST00000526480 TSC1Q92574 1164 aa8.93□□□□□ -0.98
CSTF3-207ENST00000526480 MEGF6O75095 1541 aa8.93□□□□□ -0.98
CSTF3-207ENST00000526480 MON2Q7Z3U7 1717 aa8.93□□□□□ -0.98
CSTF3-207ENST00000526480 SCN11AQ9UI33 1791 aa8.93□□□□□ -0.98
CSTF3-207ENST00000526480 ITGBL1O95965 494 aaPredicted RBP8.92□□□□□ -0.98
CSTF3-207ENST00000526480 DALRD3Q5D0E6 543 aaKnown RBP8.92□□□□□ -0.98
CSTF3-207ENST00000526480 PIM2Q9P1W9 311 aa8.92□□□□□ -0.98
CSTF3-207ENST00000526480 SSFA2P28290 1259 aa8.91□□□□□ -0.98
CSTF3-207ENST00000526480 CHRNA5P30532 468 aa8.91□□□□□ -0.98
CSTF3-207ENST00000526480 DEFB115Q30KQ5 88 aa8.91□□□□□ -0.98
CSTF3-207ENST00000526480 BLOC1S3Q6QNY0 202 aa8.91□□□□□ -0.98
CSTF3-207ENST00000526480 RNF19BQ6ZMZ0 732 aa8.91□□□□□ -0.98
CSTF3-207ENST00000526480 LINC00116Q8NCU8 138 aa8.91□□□□□ -0.98
CSTF3-207ENST00000526480 C1orf115Q9H7X2 142 aa8.91□□□□□ -0.98
CSTF3-207ENST00000526480 HMX1Q9NP08 348 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-207ENST00000526480 SALL2Q9Y467 1007 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-207ENST00000526480 CENPFP49454 3210 aa8.91□□□□□ -0.98
CSTF3-207ENST00000526480 HTTP42858 3142 aa8.91□□□□□ -0.98
CSTF3-207ENST00000526480 RANBP2P49792 3224 aaKnown RBP8.9□□□□□ -0.98
CSTF3-207ENST00000526480 NR1I2O75469 434 aa8.9□□□□□ -0.98
CSTF3-207ENST00000526480 LMNB1P20700 586 aa8.9□□□□□ -0.98
CSTF3-207ENST00000526480 ANKRD24Q8TF21 1146 aa8.9□□□□□ -0.98
CSTF3-207ENST00000526480 ZNF516Q92618 1163 aa8.9□□□□□ -0.98
CSTF3-207ENST00000526480 GDPD2Q9HCC8 539 aa8.9□□□□□ -0.98
CSTF3-207ENST00000526480 PRM3Q9NNZ6 103 aa8.9□□□□□ -0.98
CSTF3-207ENST00000526480 DESI1Q6ICB0 168 aa8.89□□□□□ -0.99
CSTF3-207ENST00000526480 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
CSTF3-207ENST00000526480 SCUBE3Q8IX30 993 aa8.89□□□□□ -0.99
CSTF3-207ENST00000526480 LRRN4Q8WUT4 740 aa8.89□□□□□ -0.99
CSTF3-207ENST00000526480 GCC1Q96CN9 775 aa8.89□□□□□ -0.99
CSTF3-207ENST00000526480 CCDC87Q9NVE4 849 aa8.89□□□□□ -0.99
CSTF3-207ENST00000526480 TBC1D2BQ9UPU7 963 aa8.89□□□□□ -0.99
CSTF3-207ENST00000526480 NDUFB9Q9Y6M9 179 aa8.89□□□□□ -0.99
CSTF3-207ENST00000526480 COL11A2P13942 1736 aaPredicted RBP8.88□□□□□ -0.99
CSTF3-207ENST00000526480 BRCA2P51587 3418 aa8.88□□□□□ -0.99
CSTF3-207ENST00000526480 ANKRD31Q8N7Z5 1873 aa8.88□□□□□ -0.99
CSTF3-207ENST00000526480 NFKBIEO00221 500 aa8.88□□□□□ -0.99
CSTF3-207ENST00000526480 ZPR1O75312 459 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms