RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 SSFA2P28290 1259 aa16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 IFIT1BQ5T764 474 aaKnown RBP16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 TAF3Q5VWG9 929 aa16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 TRMT1LQ7Z2T5 733 aaKnown RBP16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 ANKRD44Q8N8A2 993 aa16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 CCDC97Q96F63 343 aaPredicted RBP16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 TBC1D2Q9BYX2 928 aa16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 CLIP2Q9UDT6 1046 aa16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 PLCG2P16885 1265 aa16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 ZNF518AQ6AHZ1 1483 aa16.65■□□□□ 0.26
NCAPD3-203ENST00000525964 GSDMDP57764 484 aa16.64■□□□□ 0.26
NCAPD3-203ENST00000525964 STX1AQ16623 288 aa16.64■□□□□ 0.26
NCAPD3-203ENST00000525964 CCDC174Q6PII3 467 aa16.64■□□□□ 0.26
NCAPD3-203ENST00000525964 SIRT1Q96EB6 747 aa16.64■□□□□ 0.26
NCAPD3-203ENST00000525964 ATP8B2P98198 1209 aa16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 MACROD2A1Z1Q3 448 aa16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 MCMDC2Q4G0Z9 681 aa16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 USP37Q86T82 979 aa16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 RBM27Q9P2N5 1060 aaKnown RBP16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 SLC9C2Q5TAH2 1124 aa16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 CCDC91Q7Z6B0 441 aa16.64■□□□□ 0.25
NCAPD3-203ENST00000525964 CTNNA2P26232 953 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 USP8P40818 1118 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 NBPF14Q5TI25 921 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 TMCO3Q6UWJ1 677 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 NUP160Q12769 1436 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 POLD1P28340 1107 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 FERMT2Q96AC1 680 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 PANK2Q9BZ23 570 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 RMND1Q9NWS8 449 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 IQSEC3Q9UPP2 1182 aaPredicted RBP16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 B4DLN1 442 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 NF2P35240 595 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 MRPL12P52815 198 aaKnown RBP16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 RTN1Q16799 776 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 TSHZ3Q63HK5 1081 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 CPLX3Q8WVH0 158 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 DUOX2Q9NRD8 1548 aa16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 URI1O94763 535 aaPredicted RBP16.63■□□□□ 0.25
NCAPD3-203ENST00000525964 PDE1AP54750 535 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 SLC4A8Q2Y0W8 1093 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 CTNNBL1Q8WYA6 563 aaPredicted RBP16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 GCP02774 474 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 JDP2Q8WYK2 163 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 TNPO1Q92973 898 aaKnown RBP16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 DRC1Q96MC2 740 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 BIN1O00499 593 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 GNAT2P19087 354 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 RBM10P98175 930 aaKnown RBP16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 TFCP2L1Q9NZI6 479 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 UQCRHLA0A096LP55 91 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 UQCRHP07919 91 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 NUCB1Q02818 461 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 NFATC2IPQ8NCF5 419 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 ALS2CR12Q96Q35 445 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 EYA3Q99504 573 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 TAOK3Q9H2K8 898 aa16.62■□□□□ 0.25
NCAPD3-203ENST00000525964 F8W031 263 aaPredicted RBP16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 PRC1O43663 620 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 CCDC172P0C7W6 258 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 PARP3Q9Y6F1 533 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 CASQ1P31415 396 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 ZNF165P49910 485 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 NSFL1CQ9UNZ2 370 aaKnown RBP16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 SDSP20132 328 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 UBE2HP62256 183 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 DYDC1Q8WWB3 177 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 CABLES1Q8TDN4 633 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 ALG1Q9BT22 464 aa16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 NAA15Q9BXJ9 866 aaKnown RBP16.61■□□□□ 0.25
NCAPD3-203ENST00000525964 EXOC1Q9NV70 894 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 RBM8AQ9Y5S9 174 aaKnown RBP16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 ATP10BO94823 1461 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 WDR7Q9Y4E6 1490 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 MTHFSDQ2M296 383 aaKnown RBP16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 ANKRD2Q9GZV1 360 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 CALM1P0DP23 149 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 CALM2P0DP24 149 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 CALM3P0DP25 149 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 C8orf58Q8NAV2 365 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 BICD1Q96G01 975 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 GOLGA6L9A6NEM1 432 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 FERMT1Q9BQL6 677 aa16.6■□□□□ 0.25
NCAPD3-203ENST00000525964 KCNG4Q8TDN1 519 aa16.59■□□□□ 0.25
NCAPD3-203ENST00000525964 TRIM47Q96LD4 638 aa16.59■□□□□ 0.25
NCAPD3-203ENST00000525964 GDPD2Q9HCC8 539 aa16.59■□□□□ 0.25
NCAPD3-203ENST00000525964 CLEC11AQ9Y240 323 aa16.59■□□□□ 0.25
NCAPD3-203ENST00000525964 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
NCAPD3-203ENST00000525964 SYKP43405 635 aa16.59■□□□□ 0.25
NCAPD3-203ENST00000525964 CDCA7Q9BWT1 371 aaPredicted RBP16.59■□□□□ 0.25
NCAPD3-203ENST00000525964 TBX22Q9Y458 520 aa16.59■□□□□ 0.25
NCAPD3-203ENST00000525964 ASXL1Q8IXJ9 1541 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms