RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 CAMK4Q16566 473 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 SMARCC2Q8TAQ2 1214 aa9.43□□□□□ -0.9
BDNF-213ENST00000525950 KIF2AO00139 706 aaPredicted RBP9.42□□□□□ -0.9
BDNF-213ENST00000525950 NR1I2O75469 434 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 U2AF2P26368 475 aaKnown RBP eCLIP9.42□□□□□ -0.9
BDNF-213ENST00000525950 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 DRC7Q8IY82 874 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 CKAP2LQ8IYA6 745 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 CACTINQ8WUQ7 758 aaKnown RBP9.42□□□□□ -0.9
BDNF-213ENST00000525950 EAF2Q96CJ1 260 aaPredicted RBP9.42□□□□□ -0.9
BDNF-213ENST00000525950 ARID3AQ99856 593 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 RCOR1Q9UKL0 485 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 EID1Q9Y6B2 187 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 LRMPQ12912 555 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 NAA16Q6N069 864 aaPredicted RBP9.42□□□□□ -0.9
BDNF-213ENST00000525950 NYAP1Q6ZVC0 841 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 FAM53CQ9NYF3 392 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 NFAT5O94916 1531 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 FAM177BA6PVY3 158 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 GRM8O00222 908 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 TAF5LO75529 589 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 AMOTQ4VCS5 1084 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 FERMT3Q86UX7 667 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 NRBP1Q9UHY1 535 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 MAP3K2Q9Y2U5 619 aa9.42□□□□□ -0.9
BDNF-213ENST00000525950 A0A0D9SFI3 127 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 TUBB4AP04350 444 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 STX1AQ16623 288 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 CHMP4CQ96CF2 233 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 LTN1O94822 1766 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 COL15A1P39059 1388 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 ZBTB7CA1YPR0 619 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 BTBD11A6QL63 1104 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 CEP135Q66GS9 1140 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 CREBRFQ8IUR6 639 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 KAZALD1Q96I82 304 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 LGR6Q9HBX8 967 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 U3KPZ7 1027 aaPredicted RBP9.41□□□□□ -0.9
BDNF-213ENST00000525950 MYH15Q9Y2K3 1946 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 GOLGA6L19H0YKK7 550 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 KCNJ6P48051 423 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 TPD52L1Q16890 204 aaPredicted RBP9.41□□□□□ -0.9
BDNF-213ENST00000525950 PLEKHO1Q53GL0 409 aaPredicted RBP9.41□□□□□ -0.9
BDNF-213ENST00000525950 FAM173BQ6P4H8 233 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 BICD2Q8TD16 824 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 C16orf45Q96MC5 204 aaPredicted RBP9.41□□□□□ -0.9
BDNF-213ENST00000525950 DNAJC25Q9H1X3 360 aa9.41□□□□□ -0.9
BDNF-213ENST00000525950 ZHX1Q9UKY1 873 aaPredicted RBP9.41□□□□□ -0.9
BDNF-213ENST00000525950 PA2G4Q9UQ80 394 aaKnown RBP9.41□□□□□ -0.9
BDNF-213ENST00000525950 HMGB1P09429 215 aaKnown RBP9.4□□□□□ -0.9
BDNF-213ENST00000525950 ATP5JP18859 108 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 ADD1P35611 737 aaKnown RBP9.4□□□□□ -0.9
BDNF-213ENST00000525950 TEFQ10587 303 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 NEK1Q96PY6 1258 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 FSD1Q9BTV5 496 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 TFIP11Q9UBB9 837 aaKnown RBP9.4□□□□□ -0.9
BDNF-213ENST00000525950 ADAMTS7Q9UKP4 1686 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 DDX58O95786 925 aaKnown RBP9.4□□□□□ -0.9
BDNF-213ENST00000525950 GSDMDP57764 484 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 CCDC144BQ3MJ40 725 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 CCDC144CPQ8IYA2 1237 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 ZNF397Q8NF99 534 aaPredicted RBP9.4□□□□□ -0.9
BDNF-213ENST00000525950 SUCLG2Q96I99 432 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 IMPACTQ9P2X3 320 aa9.4□□□□□ -0.9
BDNF-213ENST00000525950 SPDYE4A6NLX3 237 aa9.4□□□□□ -0.91
BDNF-213ENST00000525950 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.91
BDNF-213ENST00000525950 KIF18AQ8NI77 898 aa9.4□□□□□ -0.91
BDNF-213ENST00000525950 ERO1AQ96HE7 468 aa9.4□□□□□ -0.91
BDNF-213ENST00000525950 ANO10Q9NW15 660 aa9.4□□□□□ -0.91
BDNF-213ENST00000525950 SIPA1L3O60292 1781 aaPredicted RBP9.4□□□□□ -0.91
BDNF-213ENST00000525950 RNMTO43148 476 aaKnown RBP9.39□□□□□ -0.91
BDNF-213ENST00000525950 PFKFB2O60825 505 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 NUTM2GQ5VZR2 741 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 ABTB2Q8N961 1025 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 BRF1Q92994 677 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 AGXT2Q9BYV1 514 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 OSBPL5Q9H0X9 879 aaPredicted RBP9.39□□□□□ -0.91
BDNF-213ENST00000525950 KCNQ3O43525 872 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 RGS22Q8NE09 1264 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 ENGASEQ8NFI3 743 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 DDX21Q9NR30 783 aaKnown RBP eCLIP9.39□□□□□ -0.91
BDNF-213ENST00000525950 PTPN14Q15678 1187 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 NBPF6Q5VWK0 638 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 NBPF4Q96M43 638 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 BPIFA3Q9BQP9 254 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 BICC1Q9H694 974 aaKnown RBP9.39□□□□□ -0.91
BDNF-213ENST00000525950 COPRSQ9NQ92 184 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
BDNF-213ENST00000525950 SNW1Q13573 536 aaKnown RBP9.38□□□□□ -0.91
BDNF-213ENST00000525950 ZNF589Q86UQ0 364 aaPredicted RBP9.38□□□□□ -0.91
BDNF-213ENST00000525950 ZNF396Q96N95 335 aaPredicted RBP9.38□□□□□ -0.91
BDNF-213ENST00000525950 SLC26A8Q96RN1 970 aa9.38□□□□□ -0.91
BDNF-213ENST00000525950 CAMTA1Q9Y6Y1 1673 aa9.38□□□□□ -0.91
BDNF-213ENST00000525950 H3BQV1 296 aa9.38□□□□□ -0.91
BDNF-213ENST00000525950 CCZ1BP86790 482 aa9.38□□□□□ -0.91
BDNF-213ENST00000525950 CCZ1P86791 482 aaPredicted RBP9.38□□□□□ -0.91
BDNF-213ENST00000525950 COL9A3Q14050 684 aaPredicted RBP9.38□□□□□ -0.91
BDNF-213ENST00000525950 IFFO2Q5TF58 517 aa9.38□□□□□ -0.91
BDNF-213ENST00000525950 FBXL16Q8N461 479 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms