RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
USP47-206ENST00000525367 ATXN7O15265 892 aaPredicted RBP7.7□□□□□ -1.18
USP47-206ENST00000525367 EFSO43281 561 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 BNIP3LO60238 219 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 PRPF40AO75400 957 aaKnown RBP7.7□□□□□ -1.18
USP47-206ENST00000525367 GDF11O95390 407 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 POLR3DP05423 398 aaPredicted RBP7.7□□□□□ -1.18
USP47-206ENST00000525367 EFHC2Q5JST6 749 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 SAMD5Q5TGI4 173 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 RAB44Q7Z6P3 723 aaPredicted RBP7.7□□□□□ -1.18
USP47-206ENST00000525367 ABHD17AQ96GS6 310 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 CHRDQ9H2X0 955 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 ELP3Q9H9T3 547 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 IGSF5Q9NSI5 407 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 CNTN3Q9P232 1028 aa7.7□□□□□ -1.18
USP47-206ENST00000525367 TTC16Q8NEE8 873 aa7.69□□□□□ -1.18
USP47-206ENST00000525367 ZNF837Q96EG3 531 aaPredicted RBP7.69□□□□□ -1.18
USP47-206ENST00000525367 SASH3O75995 380 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 CYP2E1P05181 493 aaPredicted RBP7.68□□□□□ -1.18
USP47-206ENST00000525367 FAM157BP0CG42 384 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 MAPTP10636 758 aaKnown RBP7.68□□□□□ -1.18
USP47-206ENST00000525367 EPB42P16452 691 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 ATP2B2Q01814 1243 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 TNP2Q05952 138 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 MRPL58Q14197 206 aaKnown RBP7.68□□□□□ -1.18
USP47-206ENST00000525367 TSNAXIP1Q2TAA8 658 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 LDLRAD1Q5T700 205 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 XKR5Q6UX68 686 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 NDFIP2Q9NV92 336 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 KCNH4Q9UQ05 1017 aa7.68□□□□□ -1.18
USP47-206ENST00000525367 GPR25O00155 361 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 EREGO14944 169 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 CPNE3O75131 537 aaKnown RBP7.67□□□□□ -1.18
USP47-206ENST00000525367 PPFIA3O75145 1194 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 RPLP1P05386 114 aaKnown RBP7.67□□□□□ -1.18
USP47-206ENST00000525367 CD33P20138 364 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 ITGA6P23229 1130 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 TARSP26639 723 aaKnown RBP7.67□□□□□ -1.18
USP47-206ENST00000525367 PDE12Q6L8Q7 609 aaKnown RBP7.67□□□□□ -1.18
USP47-206ENST00000525367 TRIM22Q8IYM9 498 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 EPS8L3Q8TE67 593 aaKnown RBP7.67□□□□□ -1.18
USP47-206ENST00000525367 SNX29Q8TEQ0 813 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 GTPBP3Q969Y2 492 aaKnown RBP7.67□□□□□ -1.18
USP47-206ENST00000525367 ZFYVE28Q9HCC9 887 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 ZFATQ9P243 1243 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 KANSL3Q9P2N6 904 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 FNDC3AQ9Y2H6 1198 aaKnown RBP7.67□□□□□ -1.18
USP47-206ENST00000525367 PCDHGC4Q9Y5F7 938 aa7.67□□□□□ -1.18
USP47-206ENST00000525367 PHACTR2O75167 634 aa7.66□□□□□ -1.18
USP47-206ENST00000525367 EGFRP00533 1210 aa7.66□□□□□ -1.18
USP47-206ENST00000525367 KCNQ4P56696 695 aa7.66□□□□□ -1.18
USP47-206ENST00000525367 DAB2P98082 770 aa7.66□□□□□ -1.18
USP47-206ENST00000525367 XPCQ01831 940 aaPredicted RBP7.66□□□□□ -1.18
USP47-206ENST00000525367 LBRQ14739 615 aaKnown RBP7.66□□□□□ -1.18
USP47-206ENST00000525367 SLC30A3Q99726 388 aa7.66□□□□□ -1.18
USP47-206ENST00000525367 BACH2Q9BYV9 841 aa7.66□□□□□ -1.18
USP47-206ENST00000525367 GSX2Q9BZM3 304 aa7.66□□□□□ -1.18
USP47-206ENST00000525367 NPHS2Q9NP85 383 aa7.66□□□□□ -1.18
USP47-206ENST00000525367 RNF225M0QZC1 329 aaPredicted RBP7.65□□□□□ -1.18
USP47-206ENST00000525367 HMGB1P09429 215 aaKnown RBP7.65□□□□□ -1.18
USP47-206ENST00000525367 VAMP1P23763 118 aa7.65□□□□□ -1.18
USP47-206ENST00000525367 KRT76Q01546 638 aa7.65□□□□□ -1.18
USP47-206ENST00000525367 PSMD2Q13200 908 aa7.65□□□□□ -1.18
USP47-206ENST00000525367 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.65□□□□□ -1.18
USP47-206ENST00000525367 ALG1LQ6GMV1 187 aa7.65□□□□□ -1.18
USP47-206ENST00000525367 FIGNL1Q6PIW4 674 aa7.65□□□□□ -1.18
USP47-206ENST00000525367 TMC4Q7Z404 712 aa7.65□□□□□ -1.18
USP47-206ENST00000525367 NLRP13Q86W25 1043 aa7.65□□□□□ -1.18
USP47-206ENST00000525367 CCDC74AQ96AQ1 378 aa7.65□□□□□ -1.18
USP47-206ENST00000525367 LATS2Q9NRM7 1088 aa7.65□□□□□ -1.18
USP47-206ENST00000525367 ABI2Q9NYB9 513 aaPredicted RBP7.65□□□□□ -1.18
USP47-206ENST00000525367 CDC14CA4D256 554 aa7.64□□□□□ -1.19
USP47-206ENST00000525367 MMP20O60882 483 aa7.64□□□□□ -1.19
USP47-206ENST00000525367 NFKB1P19838 968 aa7.64□□□□□ -1.19
USP47-206ENST00000525367 DNAJC25Q9H1X3 360 aa7.64□□□□□ -1.19
USP47-206ENST00000525367 VTI1BQ9UEU0 232 aa7.64□□□□□ -1.19
USP47-206ENST00000525367 ADAMTS8Q9UP79 889 aa7.64□□□□□ -1.19
USP47-206ENST00000525367 RARAP10276 462 aa7.63□□□□□ -1.19
USP47-206ENST00000525367 ACPPP15309 386 aa7.63□□□□□ -1.19
USP47-206ENST00000525367 TCF3P15923 654 aa7.63□□□□□ -1.19
USP47-206ENST00000525367 SPEM2Q0P670 501 aa7.63□□□□□ -1.19
USP47-206ENST00000525367 CCINQ13939 588 aa7.63□□□□□ -1.19
USP47-206ENST00000525367 COL13A1Q5TAT6 717 aaPredicted RBP7.63□□□□□ -1.19
USP47-206ENST00000525367 H7C1W4 665 aa7.62□□□□□ -1.19
USP47-206ENST00000525367 CTSHP09668 335 aa7.62□□□□□ -1.19
USP47-206ENST00000525367 GNA15P30679 374 aa7.62□□□□□ -1.19
USP47-206ENST00000525367 BHMTQ93088 406 aa7.62□□□□□ -1.19
USP47-206ENST00000525367 OSBPL7Q9BZF2 842 aa7.62□□□□□ -1.19
USP47-206ENST00000525367 MRS2Q9HD23 443 aa7.62□□□□□ -1.19
USP47-206ENST00000525367 MARK1Q9P0L2 795 aa7.62□□□□□ -1.19
USP47-206ENST00000525367 SORBS3O60504 671 aa7.61□□□□□ -1.19
USP47-206ENST00000525367 NEFLP07196 543 aa7.61□□□□□ -1.19
USP47-206ENST00000525367 CTBSQ01459 385 aa7.61□□□□□ -1.19
USP47-206ENST00000525367 TTC39BQ5VTQ0 682 aaPredicted RBP7.61□□□□□ -1.19
USP47-206ENST00000525367 C9orf131Q5VYM1 1079 aa7.61□□□□□ -1.19
USP47-206ENST00000525367 VWA5B2Q8N398 1253 aa7.61□□□□□ -1.19
USP47-206ENST00000525367 FBF1Q8TES7 1133 aa7.61□□□□□ -1.19
USP47-206ENST00000525367 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.61□□□□□ -1.19
USP47-206ENST00000525367 IGHA1P01876 353 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms