RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 COG6Q9Y2V7 657 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 ANKRD36CQ5JPF3 1778 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 KIF16BQ96L93 1317 aa8.24□□□□□ -1.09
CD44-214ENST00000525211 TNRC6CQ9HCJ0 1690 aaKnown RBP8.24□□□□□ -1.09
CD44-214ENST00000525211 NRXN2Q9P2S2 1712 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 DDX58O95786 925 aaKnown RBP8.23□□□□□ -1.09
CD44-214ENST00000525211 NLGN1Q8N2Q7 840 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 EFCAB3Q8N7B9 438 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 NLGN2Q8NFZ4 835 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 LINS1Q8NG48 757 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 SETDB2Q96T68 719 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 API5Q9BZZ5 524 aaKnown RBP8.23□□□□□ -1.09
CD44-214ENST00000525211 SRCIN1Q9C0H9 1055 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 C1orf115Q9H7X2 142 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 WWC3Q9ULE0 1092 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 ANKRD31Q8N7Z5 1873 aa8.23□□□□□ -1.09
CD44-214ENST00000525211 PXDNLA1KZ92 1463 aa8.22□□□□□ -1.09
CD44-214ENST00000525211 ZBTB7BO15156 539 aaPredicted RBP8.22□□□□□ -1.09
CD44-214ENST00000525211 PCCAP05165 728 aaPredicted RBP8.22□□□□□ -1.09
CD44-214ENST00000525211 KCNA3P22001 575 aa8.22□□□□□ -1.09
CD44-214ENST00000525211 CHRNA5P30532 468 aa8.22□□□□□ -1.09
CD44-214ENST00000525211 FOXO4P98177 505 aa8.22□□□□□ -1.09
CD44-214ENST00000525211 UBE3BQ7Z3V4 1068 aa8.22□□□□□ -1.09
CD44-214ENST00000525211 NPM2Q86SE8 214 aaKnown RBP8.22□□□□□ -1.09
CD44-214ENST00000525211 CCDC191Q8NCU4 936 aa8.22□□□□□ -1.09
CD44-214ENST00000525211 EXOC6Q8TAG9 804 aa8.22□□□□□ -1.09
CD44-214ENST00000525211 CCDC85AQ96PX6 553 aaPredicted RBP8.22□□□□□ -1.09
CD44-214ENST00000525211 UTP14AQ9BVJ6 771 aaKnown RBP8.22□□□□□ -1.09
CD44-214ENST00000525211 CWC25Q9NXE8 425 aaPredicted RBP8.22□□□□□ -1.09
CD44-214ENST00000525211 TRMT112Q9UI30 125 aaKnown RBP8.22□□□□□ -1.09
CD44-214ENST00000525211 KIAA1551Q9HCM1 1747 aa8.21□□□□□ -1.09
CD44-214ENST00000525211 GRM8O00222 908 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 IPO8O15397 1037 aaKnown RBP8.21□□□□□ -1.1
CD44-214ENST00000525211 ALDH1L1O75891 902 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 HSP90AB3PQ58FF7 597 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 IFFO2Q5TF58 517 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 NBPF5PQ86XG9 351 aaPredicted RBP8.21□□□□□ -1.1
CD44-214ENST00000525211 ITPRIPQ8IWB1 547 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 ANKRD44Q8N8A2 993 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 ZBTB38Q8NAP3 1195 aaPredicted RBP8.21□□□□□ -1.1
CD44-214ENST00000525211 CHMP4AQ9BY43 222 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 SPON1Q9HCB6 807 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 ZNF652Q9Y2D9 606 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 UTYO14607 1347 aa8.21□□□□□ -1.1
CD44-214ENST00000525211 C10orf71Q711Q0 1435 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 DDX60Q8IY21 1712 aaKnown RBP8.2□□□□□ -1.1
CD44-214ENST00000525211 N4BP2Q86UW6 1770 aaPredicted RBP8.2□□□□□ -1.1
CD44-214ENST00000525211 TAF1P21675 1872 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 A0A0G2JLW4 131 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 IRS4O14654 1257 aaPredicted RBP8.2□□□□□ -1.1
CD44-214ENST00000525211 MVPQ14764 893 aaKnown RBP8.2□□□□□ -1.1
CD44-214ENST00000525211 PARP10Q53GL7 1025 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 SLC10A5Q5PT55 438 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 OLFM4Q6UX06 510 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 CNBD1Q8NA66 436 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 FBXO22Q8NEZ5 403 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 MS4A3Q96HJ5 214 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 SEC31BQ9NQW1 1179 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 TRPC6Q9Y210 931 aa8.2□□□□□ -1.1
CD44-214ENST00000525211 COL11A2P13942 1736 aaPredicted RBP8.2□□□□□ -1.1
CD44-214ENST00000525211 PPP1R37O75864 691 aa8.19□□□□□ -1.1
CD44-214ENST00000525211 DPEP1P16444 411 aa8.19□□□□□ -1.1
CD44-214ENST00000525211 CCT4P50991 539 aaKnown RBP8.19□□□□□ -1.1
CD44-214ENST00000525211 NEXNQ0ZGT2 675 aa8.19□□□□□ -1.1
CD44-214ENST00000525211 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
CD44-214ENST00000525211 PPP1R42Q7Z4L9 355 aa8.19□□□□□ -1.1
CD44-214ENST00000525211 SIRT2Q8IXJ6 389 aa8.19□□□□□ -1.1
CD44-214ENST00000525211 FTSJ3Q8IY81 847 aaKnown RBP8.19□□□□□ -1.1
CD44-214ENST00000525211 FHDC1Q9C0D6 1143 aaPredicted RBP8.19□□□□□ -1.1
CD44-214ENST00000525211 BICC1Q9H694 974 aaKnown RBP8.19□□□□□ -1.1
CD44-214ENST00000525211 LRRFIP2Q9Y608 721 aaKnown RBP8.19□□□□□ -1.1
CD44-214ENST00000525211 SH3TC1Q8TE82 1336 aa8.19□□□□□ -1.1
CD44-214ENST00000525211 LAMB2P55268 1798 aa8.19□□□□□ -1.1
CD44-214ENST00000525211 IBTKQ9P2D0 1353 aaPredicted RBP8.19□□□□□ -1.1
CD44-214ENST00000525211 PNMA6EA0A0J9YXQ4 647 aa8.18□□□□□ -1.1
CD44-214ENST00000525211 KLRG2A4D1S0 409 aaPredicted RBP8.18□□□□□ -1.1
CD44-214ENST00000525211 WTIPA6NIX2 430 aaPredicted RBP8.18□□□□□ -1.1
CD44-214ENST00000525211 PRKCSHP14314 528 aaPredicted RBP8.18□□□□□ -1.1
CD44-214ENST00000525211 HMGB2P26583 209 aaKnown RBP8.18□□□□□ -1.1
CD44-214ENST00000525211 LMBR1LQ6UX01 489 aa8.18□□□□□ -1.1
CD44-214ENST00000525211 TPTE2Q6XPS3 522 aa8.18□□□□□ -1.1
CD44-214ENST00000525211 TTLL11Q8NHH1 800 aa8.18□□□□□ -1.1
CD44-214ENST00000525211 KLHDC4Q8TBB5 520 aa8.18□□□□□ -1.1
CD44-214ENST00000525211 ZNF594Q96JF6 807 aaPredicted RBP8.18□□□□□ -1.1
CD44-214ENST00000525211 GREM2Q9H772 168 aa8.18□□□□□ -1.1
CD44-214ENST00000525211 ZBTB40Q9NUA8 1239 aa8.18□□□□□ -1.1
CD44-214ENST00000525211 C9orf78Q9NZ63 289 aaPredicted RBP8.18□□□□□ -1.1
CD44-214ENST00000525211 PPP1R1BQ9UD71 204 aaPredicted RBP8.18□□□□□ -1.1
CD44-214ENST00000525211 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
CD44-214ENST00000525211 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.18□□□□□ -1.1
CD44-214ENST00000525211 CDHR2Q9BYE9 1310 aa8.18□□□□□ -1.1
CD44-214ENST00000525211 CSF1RP07333 972 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 SRGNP10124 158 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 POLD1P28340 1107 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 RFX5P48382 616 aaPredicted RBP8.17□□□□□ -1.1
CD44-214ENST00000525211 CTSWP56202 376 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 FAM161AQ3B820 660 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 CRY2Q49AN0 593 aa8.17□□□□□ -1.1
CD44-214ENST00000525211 C2CD5Q86YS7 1000 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms