RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 DDX19BQ9UMR2 479 aa16.42■□□□□ 0.22
SWAP70-203ENST00000524817 COL4A1P02462 1669 aa16.42■□□□□ 0.22
SWAP70-203ENST00000524817 TNRC6CQ9HCJ0 1690 aaKnown RBP16.42■□□□□ 0.22
SWAP70-203ENST00000524817 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
SWAP70-203ENST00000524817 HELBQ8NG08 1087 aaPredicted RBP16.42■□□□□ 0.22
SWAP70-203ENST00000524817 N4BP2Q86UW6 1770 aaPredicted RBP16.42■□□□□ 0.22
SWAP70-203ENST00000524817 RNF123Q5XPI4 1314 aa16.41■□□□□ 0.22
SWAP70-203ENST00000524817 SRGAP3O43295 1099 aa16.41■□□□□ 0.22
SWAP70-203ENST00000524817 GNAI2P04899 355 aa16.41■□□□□ 0.22
SWAP70-203ENST00000524817 SRGNP10124 158 aa16.41■□□□□ 0.22
SWAP70-203ENST00000524817 ITGA6P23229 1130 aa16.41■□□□□ 0.22
SWAP70-203ENST00000524817 KCNA3P22001 575 aa16.41■□□□□ 0.22
SWAP70-203ENST00000524817 PUS3Q9BZE2 481 aaKnown RBP16.41■□□□□ 0.22
SWAP70-203ENST00000524817 PCDHB15Q9Y5E8 787 aa16.41■□□□□ 0.22
SWAP70-203ENST00000524817 ZBTB40Q9NUA8 1239 aa16.4■□□□□ 0.22
SWAP70-203ENST00000524817 GNAI3P08754 354 aa16.4■□□□□ 0.22
SWAP70-203ENST00000524817 C21orf2O43822 256 aa16.4■□□□□ 0.22
SWAP70-203ENST00000524817 MS4A1P11836 297 aa16.4■□□□□ 0.22
SWAP70-203ENST00000524817 PDE6BP35913 854 aa16.4■□□□□ 0.22
SWAP70-203ENST00000524817 ANKRD31Q8N7Z5 1873 aa16.39■□□□□ 0.21
SWAP70-203ENST00000524817 DDX46Q7L014 1031 aaKnown RBP16.39■□□□□ 0.21
SWAP70-203ENST00000524817 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
SWAP70-203ENST00000524817 GPR101Q96P66 508 aaPredicted RBP16.39■□□□□ 0.21
SWAP70-203ENST00000524817 SLC10A5Q5PT55 438 aa16.38■□□□□ 0.21
SWAP70-203ENST00000524817 CCDC57Q2TAC2 916 aa16.38■□□□□ 0.21
SWAP70-203ENST00000524817 SIRT2Q8IXJ6 389 aa16.38■□□□□ 0.21
SWAP70-203ENST00000524817 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 LRRC24Q50LG9 513 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 CACNA1SQ13698 1873 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 COL24A1Q17RW2 1714 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 TAF5LO75529 589 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 NEFLP07196 543 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 IFIT5Q13325 482 aaKnown RBP16.37■□□□□ 0.21
SWAP70-203ENST00000524817 PRPF40BQ6NWY9 871 aaKnown RBP16.37■□□□□ 0.21
SWAP70-203ENST00000524817 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 CDHR2Q9BYE9 1310 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 C10orf71Q711Q0 1435 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 PXDNLA1KZ92 1463 aa16.37■□□□□ 0.21
SWAP70-203ENST00000524817 DDX60Q8IY21 1712 aaKnown RBP16.36■□□□□ 0.21
SWAP70-203ENST00000524817 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
SWAP70-203ENST00000524817 UTYO14607 1347 aa16.36■□□□□ 0.21
SWAP70-203ENST00000524817 MASTLQ96GX5 879 aa16.36■□□□□ 0.21
SWAP70-203ENST00000524817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.36■□□□□ 0.21
SWAP70-203ENST00000524817 CD2APQ9Y5K6 639 aa16.35■□□□□ 0.21
SWAP70-203ENST00000524817 ANKRD18BA2A2Z9 1011 aa16.35■□□□□ 0.21
SWAP70-203ENST00000524817 RGL2O15211 777 aa16.35■□□□□ 0.21
SWAP70-203ENST00000524817 CSF1RP07333 972 aa16.35■□□□□ 0.21
SWAP70-203ENST00000524817 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
SWAP70-203ENST00000524817 CRY2Q49AN0 593 aa16.35■□□□□ 0.21
SWAP70-203ENST00000524817 LDHAL6AQ6ZMR3 332 aa16.35■□□□□ 0.21
SWAP70-203ENST00000524817 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
SWAP70-203ENST00000524817 NPR1P16066 1061 aa16.34■□□□□ 0.21
SWAP70-203ENST00000524817 RPS8P62241 208 aaKnown RBP16.34■□□□□ 0.21
SWAP70-203ENST00000524817 GPR162Q16538 588 aa16.34■□□□□ 0.21
SWAP70-203ENST00000524817 TTLL6Q8N841 843 aa16.34■□□□□ 0.21
SWAP70-203ENST00000524817 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
SWAP70-203ENST00000524817 MPHOSPH8Q99549 860 aa16.34■□□□□ 0.21
SWAP70-203ENST00000524817 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
SWAP70-203ENST00000524817 COL11A2P13942 1736 aaPredicted RBP16.34■□□□□ 0.21
SWAP70-203ENST00000524817 YBX3P16989 372 aaKnown RBP eCLIP16.34■□□□□ 0.21
SWAP70-203ENST00000524817 B4GALNT3Q6L9W6 998 aa16.34■□□□□ 0.21
SWAP70-203ENST00000524817 SKAP1Q86WV1 359 aa16.34■□□□□ 0.21
SWAP70-203ENST00000524817 CNNM1Q9NRU3 951 aa16.34■□□□□ 0.21
SWAP70-203ENST00000524817 ANKRD18AQ8IVF6 992 aa16.33■□□□□ 0.21
SWAP70-203ENST00000524817 SURF6O75683 361 aaKnown RBP16.33■□□□□ 0.2
SWAP70-203ENST00000524817 SLX4Q8IY92 1834 aa16.33■□□□□ 0.2
SWAP70-203ENST00000524817 LAMB2P55268 1798 aa16.33■□□□□ 0.2
SWAP70-203ENST00000524817 TGFB2P61812 414 aa16.32■□□□□ 0.2
SWAP70-203ENST00000524817 PTPN12Q05209 780 aaKnown RBP16.32■□□□□ 0.2
SWAP70-203ENST00000524817 NRXN2Q9P2S2 1712 aa16.32■□□□□ 0.2
SWAP70-203ENST00000524817 IGHDP01880 384 aa16.32■□□□□ 0.2
SWAP70-203ENST00000524817 DALRD3Q5D0E6 543 aaKnown RBP16.32■□□□□ 0.2
SWAP70-203ENST00000524817 PLA2G12BQ9BX93 195 aa16.32■□□□□ 0.2
SWAP70-203ENST00000524817 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
SWAP70-203ENST00000524817 GRAPQ13588 217 aa16.32■□□□□ 0.2
SWAP70-203ENST00000524817 RABL6Q3YEC7 729 aaPredicted RBP16.32■□□□□ 0.2
SWAP70-203ENST00000524817 GRAPLQ8TC17 118 aaPredicted RBP16.32■□□□□ 0.2
SWAP70-203ENST00000524817 KLRG2A4D1S0 409 aaPredicted RBP16.31■□□□□ 0.2
SWAP70-203ENST00000524817 PPEF1O14829 653 aaPredicted RBP16.31■□□□□ 0.2
SWAP70-203ENST00000524817 IGHMBP2P38935 993 aaKnown RBP16.31■□□□□ 0.2
SWAP70-203ENST00000524817 RFX5P48382 616 aaPredicted RBP16.31■□□□□ 0.2
SWAP70-203ENST00000524817 ATP8B2P98198 1209 aa16.31■□□□□ 0.2
SWAP70-203ENST00000524817 ANKIB1Q9P2G1 1089 aa16.31■□□□□ 0.2
SWAP70-203ENST00000524817 SMARCA5O60264 1052 aaPredicted RBP16.31■□□□□ 0.2
SWAP70-203ENST00000524817 IL1RAPL2Q9NP60 686 aa16.31■□□□□ 0.2
SWAP70-203ENST00000524817 ARHGAP27Q6ZUM4 889 aa16.3■□□□□ 0.2
SWAP70-203ENST00000524817 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
SWAP70-203ENST00000524817 RIMBP2O15034 1052 aa16.3■□□□□ 0.2
SWAP70-203ENST00000524817 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
SWAP70-203ENST00000524817 MYH3P11055 1940 aa16.3■□□□□ 0.2
SWAP70-203ENST00000524817 ALDH1B1P30837 517 aa16.29■□□□□ 0.2
SWAP70-203ENST00000524817 RASSF7Q02833 373 aa16.29■□□□□ 0.2
SWAP70-203ENST00000524817 KLRK1P26718 216 aa16.29■□□□□ 0.2
SWAP70-203ENST00000524817 CNKSR1Q969H4 720 aa16.29■□□□□ 0.2
SWAP70-203ENST00000524817 CDC5LQ99459 802 aaKnown RBP16.29■□□□□ 0.2
SWAP70-203ENST00000524817 MINPP1Q9UNW1 487 aa16.29■□□□□ 0.2
SWAP70-203ENST00000524817 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
SWAP70-203ENST00000524817 HOXA10P31260 410 aaPredicted RBP16.28■□□□□ 0.2
SWAP70-203ENST00000524817 GPSM2P81274 684 aa16.28■□□□□ 0.2
SWAP70-203ENST00000524817 CHRNDQ07001 517 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms