RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 RABL6Q3YEC7 729 aaPredicted RBP10.63□□□□□ -0.71
PKP3-202ENST00000524646 LRP10Q7Z4F1 713 aa10.63□□□□□ -0.71
PKP3-202ENST00000524646 UBE2Q2Q8WVN8 375 aa10.63□□□□□ -0.71
PKP3-202ENST00000524646 SIL1Q9H173 461 aa10.63□□□□□ -0.71
PKP3-202ENST00000524646 TPCN1Q9ULQ1 816 aa10.63□□□□□ -0.71
PKP3-202ENST00000524646 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
PKP3-202ENST00000524646 ARAP2Q8WZ64 1704 aa10.63□□□□□ -0.71
PKP3-202ENST00000524646 C4AP0C0L4 1744 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 C4BP0C0L5 1744 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 HCLS1P14317 486 aaPredicted RBP10.62□□□□□ -0.71
PKP3-202ENST00000524646 ATP5JP18859 108 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 SLC39A6Q13433 755 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 TNNI3KQ59H18 835 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 EPHA10Q5JZY3 1008 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 USPL1Q5W0Q7 1092 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 SASS6Q6UVJ0 657 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 CDC37L1Q7L3B6 337 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 IFNL2Q8IZJ0 200 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 NECAB1Q8N987 351 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 BOLA2Q9H3K6 86 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 NLRP2Q9NX02 1062 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 USP25Q9UHP3 1055 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 DBNLQ9UJU6 430 aaKnown RBP10.62□□□□□ -0.71
PKP3-202ENST00000524646 FPGT-TNNI3KV9GXZ4 949 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 WNK3Q9BYP7 1800 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 CPDO75976 1380 aa10.62□□□□□ -0.71
PKP3-202ENST00000524646 SH3TC1Q8TE82 1336 aa10.61□□□□□ -0.71
PKP3-202ENST00000524646 SNRPA1P09661 255 aaKnown RBP10.61□□□□□ -0.71
PKP3-202ENST00000524646 MYL6BP14649 208 aa10.61□□□□□ -0.71
PKP3-202ENST00000524646 TOB2Q14106 344 aaPredicted RBP10.61□□□□□ -0.71
PKP3-202ENST00000524646 HSP90AA2PQ14568 343 aaPredicted RBP10.61□□□□□ -0.71
PKP3-202ENST00000524646 COPS6Q7L5N1 327 aa10.61□□□□□ -0.71
PKP3-202ENST00000524646 ZNF589Q86UQ0 364 aaPredicted RBP10.61□□□□□ -0.71
PKP3-202ENST00000524646 PROSER2Q86WR7 435 aaPredicted RBP10.61□□□□□ -0.71
PKP3-202ENST00000524646 TTC5Q8N0Z6 440 aa10.61□□□□□ -0.71
PKP3-202ENST00000524646 ZNF496Q96IT1 587 aaPredicted RBP10.61□□□□□ -0.71
PKP3-202ENST00000524646 FMNL2Q96PY5 1086 aa10.61□□□□□ -0.71
PKP3-202ENST00000524646 R3HCC1Q9Y3T6 440 aaKnown RBP10.61□□□□□ -0.71
PKP3-202ENST00000524646 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
PKP3-202ENST00000524646 TNS2Q63HR2 1409 aa10.6□□□□□ -0.71
PKP3-202ENST00000524646 TAF5LO75529 589 aa10.6□□□□□ -0.71
PKP3-202ENST00000524646 TTC6Q86TZ1 520 aa10.6□□□□□ -0.71
PKP3-202ENST00000524646 KLHDC4Q8TBB5 520 aa10.6□□□□□ -0.71
PKP3-202ENST00000524646 DDX54Q8TDD1 881 aaKnown RBP10.6□□□□□ -0.71
PKP3-202ENST00000524646 GTF3C6Q969F1 213 aa10.6□□□□□ -0.71
PKP3-202ENST00000524646 DCAF5Q96JK2 942 aa10.6□□□□□ -0.71
PKP3-202ENST00000524646 NUP62CLQ9H1M0 184 aa10.6□□□□□ -0.71
PKP3-202ENST00000524646 ITGB4P16144 1822 aa10.6□□□□□ -0.71
PKP3-202ENST00000524646 UQCRHLA0A096LP55 91 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 ADCY5O95622 1261 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 UQCRHP07919 91 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 CCDC192P0DO97 292 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 CASP7P55210 303 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 ZC3H6P61129 1189 aaKnown RBP10.59□□□□□ -0.71
PKP3-202ENST00000524646 PTPN12Q05209 780 aaKnown RBP10.59□□□□□ -0.71
PKP3-202ENST00000524646 TFCP2Q12800 502 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 LARP1BQ659C4 914 aaKnown RBP10.59□□□□□ -0.71
PKP3-202ENST00000524646 GIMAP6Q6P9H5 292 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 UBE3BQ7Z3V4 1068 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 PIBF1Q8WXW3 757 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 HAUS7Q99871 368 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 C19orf44Q9H6X5 657 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 TAF6LQ9Y6J9 622 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
PKP3-202ENST00000524646 LRP5O75197 1615 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 TMEM94Q12767 1356 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 CYP27B1O15528 508 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 KDM4AO75164 1064 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 TPM3P06753 285 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 MAP3K11Q16584 847 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 GLIPR1L2Q4G1C9 344 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 TICAM2Q86XR7 235 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 NFATC2IPQ8NCF5 419 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 PLBD2Q8NHP8 589 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 SCAND2PQ9GZW5 306 aaPredicted RBP10.58□□□□□ -0.72
PKP3-202ENST00000524646 DDX19AQ9NUU7 478 aaKnown RBP10.58□□□□□ -0.72
PKP3-202ENST00000524646 AKAP11Q9UKA4 1901 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 DOCK2Q92608 1830 aa10.58□□□□□ -0.72
PKP3-202ENST00000524646 DYNC1I1O14576 645 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 RESTQ13127 1097 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 COL9A3Q14050 684 aaPredicted RBP10.57□□□□□ -0.72
PKP3-202ENST00000524646 RBM43Q6ZSC3 357 aaKnown RBP10.57□□□□□ -0.72
PKP3-202ENST00000524646 FERMT3Q86UX7 667 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 FAM200AQ8TCP9 573 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 EDC3Q96F86 508 aaKnown RBP10.57□□□□□ -0.72
PKP3-202ENST00000524646 TCEANC2Q96MN5 208 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 MAP7D2Q96T17 732 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 DBNDD2Q9BQY9 259 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 CLSTN2Q9H4D0 955 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 GPR108Q9NPR9 543 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 NHSL1Q5SYE7 1610 aa10.57□□□□□ -0.72
PKP3-202ENST00000524646 COL5A2P05997 1499 aaPredicted RBP10.56□□□□□ -0.72
PKP3-202ENST00000524646 LRP6O75581 1613 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 COL22A1Q8NFW1 1626 aaPredicted RBP10.56□□□□□ -0.72
PKP3-202ENST00000524646 MYO5AQ9Y4I1 1855 aaKnown RBP10.56□□□□□ -0.72
PKP3-202ENST00000524646 LIG1P18858 919 aa10.56□□□□□ -0.72
PKP3-202ENST00000524646 TRHP20396 242 aaPredicted RBP10.56□□□□□ -0.72
PKP3-202ENST00000524646 TYRO3Q06418 890 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms