RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 RTFDC1Q9BY42 306 aaPredicted RBP12.51□□□□□ -0.41
CAPN11-202ENST00000524554 CHPF2Q9P2E5 772 aa12.51□□□□□ -0.41
CAPN11-202ENST00000524554 TRMT112Q9UI30 125 aaKnown RBP12.51□□□□□ -0.41
CAPN11-202ENST00000524554 COL4A5P29400 1685 aa12.51□□□□□ -0.41
CAPN11-202ENST00000524554 ABCC4O15439 1325 aa12.5□□□□□ -0.41
CAPN11-202ENST00000524554 CXCL9Q07325 125 aa12.5□□□□□ -0.41
CAPN11-202ENST00000524554 HSP90AB3PQ58FF7 597 aa12.5□□□□□ -0.41
CAPN11-202ENST00000524554 TNS4Q8IZW8 715 aa12.5□□□□□ -0.41
CAPN11-202ENST00000524554 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
CAPN11-202ENST00000524554 CNTNAP1P78357 1384 aa12.5□□□□□ -0.41
CAPN11-202ENST00000524554 TIAM2Q8IVF5 1701 aa12.5□□□□□ -0.41
CAPN11-202ENST00000524554 PPIP5K2O43314 1243 aa12.49□□□□□ -0.41
CAPN11-202ENST00000524554 GNAI1P63096 354 aa12.49□□□□□ -0.41
CAPN11-202ENST00000524554 B4GALNT3Q6L9W6 998 aa12.49□□□□□ -0.41
CAPN11-202ENST00000524554 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
CAPN11-202ENST00000524554 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
CAPN11-202ENST00000524554 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
CAPN11-202ENST00000524554 VPS33BQ9H267 617 aa12.49□□□□□ -0.41
CAPN11-202ENST00000524554 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
CAPN11-202ENST00000524554 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
CAPN11-202ENST00000524554 MS4A1P11836 297 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 PDE3AQ14432 1141 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 NIM1KQ8IY84 436 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 PLBD2Q8NHP8 589 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 ISCA1Q9BUE6 129 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 IFT57Q9NWB7 429 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 ZNRF3Q9ULT6 936 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 FANCIQ9NVI1 1328 aa12.48□□□□□ -0.41
CAPN11-202ENST00000524554 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 FOXN1O15353 648 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 PLIN1O60240 522 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 ZNF853P0CG23 659 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 RARSP54136 660 aaKnown RBP12.47□□□□□ -0.41
CAPN11-202ENST00000524554 GRAPQ13588 217 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 DEFB115Q30KQ5 88 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 HDGFL1Q5TGJ6 251 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 CST9Q5W186 159 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
CAPN11-202ENST00000524554 MPNDQ8N594 471 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 EXOC6Q8TAG9 804 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 GRAPLQ8TC17 118 aaPredicted RBP12.47□□□□□ -0.41
CAPN11-202ENST00000524554 FAM89AQ96GI7 184 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 MBIPQ9NS73 344 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 RASSF10A6NK89 507 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 HOXB7P09629 217 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
CAPN11-202ENST00000524554 DPP8Q6V1X1 898 aaPredicted RBP12.47□□□□□ -0.41
CAPN11-202ENST00000524554 USP50Q70EL3 339 aaPredicted RBP12.47□□□□□ -0.41
CAPN11-202ENST00000524554 TMX4Q9H1E5 349 aaPredicted RBP12.47□□□□□ -0.41
CAPN11-202ENST00000524554 GPRC5DQ9NZD1 345 aa12.47□□□□□ -0.41
CAPN11-202ENST00000524554 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
CAPN11-202ENST00000524554 DICER1Q9UPY3 1922 aaKnown RBP12.46□□□□□ -0.41
CAPN11-202ENST00000524554 TRAF5O00463 557 aa12.46□□□□□ -0.42
CAPN11-202ENST00000524554 CAPN15O75808 1086 aa12.46□□□□□ -0.42
CAPN11-202ENST00000524554 BCAR3O75815 825 aa12.46□□□□□ -0.42
CAPN11-202ENST00000524554 KIAA2012Q0VF49 1180 aa12.46□□□□□ -0.42
CAPN11-202ENST00000524554 TRIM28Q13263 835 aaKnown RBP12.46□□□□□ -0.42
CAPN11-202ENST00000524554 AAMPQ13685 434 aa12.46□□□□□ -0.42
CAPN11-202ENST00000524554 SF3B3Q15393 1217 aaKnown RBP12.46□□□□□ -0.42
CAPN11-202ENST00000524554 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.42
CAPN11-202ENST00000524554 CRBNQ96SW2 442 aa12.46□□□□□ -0.42
CAPN11-202ENST00000524554 WBP1LQ9NX94 342 aa12.46□□□□□ -0.42
CAPN11-202ENST00000524554 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
CAPN11-202ENST00000524554 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
CAPN11-202ENST00000524554 GMPSP49915 693 aaPredicted RBP12.45□□□□□ -0.42
CAPN11-202ENST00000524554 HIRAP54198 1017 aaPredicted RBP12.45□□□□□ -0.42
CAPN11-202ENST00000524554 EXOSC9Q06265 439 aaKnown RBP12.45□□□□□ -0.42
CAPN11-202ENST00000524554 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
CAPN11-202ENST00000524554 CELF1Q92879 486 aaKnown RBP12.45□□□□□ -0.42
CAPN11-202ENST00000524554 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
CAPN11-202ENST00000524554 HYPKQ9NX55 129 aa12.45□□□□□ -0.42
CAPN11-202ENST00000524554 RAD17O75943 681 aa12.44□□□□□ -0.42
CAPN11-202ENST00000524554 TSR2Q969E8 191 aaKnown RBP12.44□□□□□ -0.42
CAPN11-202ENST00000524554 ADARB2Q9NS39 739 aaKnown RBP12.44□□□□□ -0.42
CAPN11-202ENST00000524554 PGAP2Q9UHJ9 254 aa12.44□□□□□ -0.42
CAPN11-202ENST00000524554 ARFGEF2Q9Y6D5 1785 aa12.44□□□□□ -0.42
CAPN11-202ENST00000524554 SHTN1A0MZ66 631 aa12.43□□□□□ -0.42
CAPN11-202ENST00000524554 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
CAPN11-202ENST00000524554 CIAPIN1Q6FI81 312 aa12.43□□□□□ -0.42
CAPN11-202ENST00000524554 C8orf58Q8NAV2 365 aa12.43□□□□□ -0.42
CAPN11-202ENST00000524554 POLLQ9UGP5 575 aa12.43□□□□□ -0.42
CAPN11-202ENST00000524554 ABT1Q9ULW3 272 aaKnown RBP12.43□□□□□ -0.42
CAPN11-202ENST00000524554 WDR33Q9C0J8 1336 aaKnown RBP12.43□□□□□ -0.42
CAPN11-202ENST00000524554 NUP98P52948 1817 aa12.43□□□□□ -0.42
CAPN11-202ENST00000524554 CACNA1SQ13698 1873 aa12.43□□□□□ -0.42
CAPN11-202ENST00000524554 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
CAPN11-202ENST00000524554 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
CAPN11-202ENST00000524554 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
CAPN11-202ENST00000524554 PRDM10Q9NQV6 1147 aa12.42□□□□□ -0.42
CAPN11-202ENST00000524554 KCNQ5Q9NR82 932 aa12.42□□□□□ -0.42
CAPN11-202ENST00000524554 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
CAPN11-202ENST00000524554 CTCFP49711 727 aaPredicted RBP12.42□□□□□ -0.42
CAPN11-202ENST00000524554 GPSM2P81274 684 aa12.42□□□□□ -0.42
CAPN11-202ENST00000524554 TNIP1Q15025 636 aa12.42□□□□□ -0.42
CAPN11-202ENST00000524554 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
CAPN11-202ENST00000524554 TMC4Q7Z404 712 aa12.42□□□□□ -0.42
CAPN11-202ENST00000524554 FRAT1Q92837 279 aaPredicted RBP12.42□□□□□ -0.42
CAPN11-202ENST00000524554 SMC4Q9NTJ3 1288 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms