RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 ZNF589Q86UQ0 364 aaPredicted RBP13.51□□□□□ -0.25
TNPO1-213ENST00000523768 NAP1L5Q96NT1 182 aaPredicted RBP13.51□□□□□ -0.25
TNPO1-213ENST00000523768 FAM184AQ8NB25 1140 aa13.51□□□□□ -0.25
TNPO1-213ENST00000523768 JARID2Q92833 1246 aaPredicted RBP13.51□□□□□ -0.25
TNPO1-213ENST00000523768 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
TNPO1-213ENST00000523768 H7C1W4 665 aa13.5□□□□□ -0.25
TNPO1-213ENST00000523768 PTCD1O75127 700 aaKnown RBP13.5□□□□□ -0.25
TNPO1-213ENST00000523768 DDX54Q8TDD1 881 aaKnown RBP13.5□□□□□ -0.25
TNPO1-213ENST00000523768 UVSSAQ2YD98 709 aa13.5□□□□□ -0.25
TNPO1-213ENST00000523768 NECAB1Q8N987 351 aa13.5□□□□□ -0.25
TNPO1-213ENST00000523768 RNF214Q8ND24 703 aa13.5□□□□□ -0.25
TNPO1-213ENST00000523768 EDC3Q96F86 508 aaKnown RBP13.5□□□□□ -0.25
TNPO1-213ENST00000523768 HAUS7Q99871 368 aa13.5□□□□□ -0.25
TNPO1-213ENST00000523768 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
TNPO1-213ENST00000523768 KRT32Q14532 448 aa13.49□□□□□ -0.25
TNPO1-213ENST00000523768 NBPF26B4DH59 902 aa13.49□□□□□ -0.25
TNPO1-213ENST00000523768 PDCP20941 246 aa13.49□□□□□ -0.25
TNPO1-213ENST00000523768 MCM5P33992 734 aa13.49□□□□□ -0.25
TNPO1-213ENST00000523768 FOXO4P98177 505 aa13.49□□□□□ -0.25
TNPO1-213ENST00000523768 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
TNPO1-213ENST00000523768 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
TNPO1-213ENST00000523768 NBPF10Q6P3W6 841 aaKnown RBP13.49□□□□□ -0.25
TNPO1-213ENST00000523768 NBPF15Q8N660 670 aa13.49□□□□□ -0.25
TNPO1-213ENST00000523768 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
TNPO1-213ENST00000523768 WDR17Q8IZU2 1322 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 FIBPO43427 364 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 ZNF500O60304 480 aaPredicted RBP13.48□□□□□ -0.25
TNPO1-213ENST00000523768 DNM1Q05193 864 aaKnown RBP13.48□□□□□ -0.25
TNPO1-213ENST00000523768 LMBR1LQ6UX01 489 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 TICAM2Q86XR7 235 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
TNPO1-213ENST00000523768 TAF6LQ9Y6J9 622 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
TNPO1-213ENST00000523768 ZCRB1Q8TBF4 217 aaKnown RBP13.48□□□□□ -0.25
TNPO1-213ENST00000523768 GPR108Q9NPR9 543 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
TNPO1-213ENST00000523768 UBR2Q8IWV8 1755 aa13.47□□□□□ -0.25
TNPO1-213ENST00000523768 NKX1-1Q15270 411 aaPredicted RBP13.47□□□□□ -0.25
TNPO1-213ENST00000523768 ZKSCAN5Q9Y2L8 839 aa13.47□□□□□ -0.25
TNPO1-213ENST00000523768 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
TNPO1-213ENST00000523768 ZNF609O15014 1411 aa13.47□□□□□ -0.25
TNPO1-213ENST00000523768 VPS37CA5D8V6 355 aaPredicted RBP13.47□□□□□ -0.25
TNPO1-213ENST00000523768 OFD1O75665 1012 aa13.47□□□□□ -0.25
TNPO1-213ENST00000523768 CWC25Q9NXE8 425 aaPredicted RBP13.47□□□□□ -0.25
TNPO1-213ENST00000523768 MCMDC2Q4G0Z9 681 aa13.46□□□□□ -0.25
TNPO1-213ENST00000523768 KBTBD3Q8NAB2 608 aa13.46□□□□□ -0.25
TNPO1-213ENST00000523768 NUP188Q5SRE5 1749 aa13.46□□□□□ -0.25
TNPO1-213ENST00000523768 ATG9AQ7Z3C6 839 aa13.46□□□□□ -0.25
TNPO1-213ENST00000523768 KCPQ6ZWJ8 1503 aa13.46□□□□□ -0.26
TNPO1-213ENST00000523768 PALLDQ8WX93 1383 aa13.46□□□□□ -0.26
TNPO1-213ENST00000523768 SH3TC1Q8TE82 1336 aa13.46□□□□□ -0.26
TNPO1-213ENST00000523768 TTLL7Q6ZT98 887 aa13.45□□□□□ -0.26
TNPO1-213ENST00000523768 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
TNPO1-213ENST00000523768 CCDC191Q8NCU4 936 aa13.45□□□□□ -0.26
TNPO1-213ENST00000523768 TCEANC2Q96MN5 208 aa13.45□□□□□ -0.26
TNPO1-213ENST00000523768 NEK1Q96PY6 1258 aa13.45□□□□□ -0.26
TNPO1-213ENST00000523768 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
TNPO1-213ENST00000523768 ELP1O95163 1332 aa13.45□□□□□ -0.26
TNPO1-213ENST00000523768 FUCA2Q9BTY2 467 aa13.45□□□□□ -0.26
TNPO1-213ENST00000523768 PAPPAQ13219 1627 aa13.45□□□□□ -0.26
TNPO1-213ENST00000523768 TJP1Q07157 1748 aa13.44□□□□□ -0.26
TNPO1-213ENST00000523768 DTNBO60941 627 aa13.44□□□□□ -0.26
TNPO1-213ENST00000523768 IL15P40933 162 aaPredicted RBP13.44□□□□□ -0.26
TNPO1-213ENST00000523768 KRT85P78386 507 aa13.44□□□□□ -0.26
TNPO1-213ENST00000523768 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.44□□□□□ -0.26
TNPO1-213ENST00000523768 TOM1L2Q6ZVM7 507 aa13.44□□□□□ -0.26
TNPO1-213ENST00000523768 CDC37L1Q7L3B6 337 aa13.44□□□□□ -0.26
TNPO1-213ENST00000523768 PRDM11Q9NQV5 511 aa13.44□□□□□ -0.26
TNPO1-213ENST00000523768 ATG3Q9NT62 314 aa13.44□□□□□ -0.26
TNPO1-213ENST00000523768 NDUFB9Q9Y6M9 179 aa13.44□□□□□ -0.26
TNPO1-213ENST00000523768 COL5A2P05997 1499 aaPredicted RBP13.44□□□□□ -0.26
TNPO1-213ENST00000523768 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
TNPO1-213ENST00000523768 A1BGP04217 495 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 CYP21A2P08686 494 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 DDX46Q7L014 1031 aaKnown RBP13.43□□□□□ -0.26
TNPO1-213ENST00000523768 SEC62Q99442 399 aaKnown RBP13.43□□□□□ -0.26
TNPO1-213ENST00000523768 HELLSQ9NRZ9 838 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 CCDC129Q6ZRS4 1044 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 TTC6Q86TZ1 520 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 GTF3C6Q969F1 213 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 CARD10Q9BWT7 1032 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 CHMP3Q9Y3E7 222 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 XIRP1Q702N8 1843 aaKnown RBP13.43□□□□□ -0.26
TNPO1-213ENST00000523768 EYA2O00167 538 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 CIAO1O76071 339 aa13.43□□□□□ -0.26
TNPO1-213ENST00000523768 SOS2Q07890 1332 aaPredicted RBP13.42□□□□□ -0.26
TNPO1-213ENST00000523768 CHGBP05060 677 aa13.42□□□□□ -0.26
TNPO1-213ENST00000523768 TPM2P07951 284 aa13.42□□□□□ -0.26
TNPO1-213ENST00000523768 IL2RBP14784 551 aa13.42□□□□□ -0.26
TNPO1-213ENST00000523768 TERF1P54274 439 aa13.42□□□□□ -0.26
TNPO1-213ENST00000523768 DSCC1Q9BVC3 393 aa13.42□□□□□ -0.26
TNPO1-213ENST00000523768 PAG1Q9NWQ8 432 aa13.42□□□□□ -0.26
TNPO1-213ENST00000523768 HMGB1P09429 215 aaKnown RBP13.42□□□□□ -0.26
TNPO1-213ENST00000523768 HCLS1P14317 486 aaPredicted RBP13.42□□□□□ -0.26
TNPO1-213ENST00000523768 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
TNPO1-213ENST00000523768 SCAND2PQ9GZW5 306 aaPredicted RBP13.42□□□□□ -0.26
TNPO1-213ENST00000523768 ZMYM1Q5SVZ6 1142 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms