RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 CXXC1Q9P0U4 656 aaPredicted RBP8.72□□□□□ -1.01
SREK1-213ENST00000523655 RTCBQ9Y3I0 505 aaKnown RBP8.72□□□□□ -1.01
SREK1-213ENST00000523655 BAG6P46379 1132 aa8.71□□□□□ -1.02
SREK1-213ENST00000523655 CMTR1Q8N1G2 835 aaKnown RBP8.71□□□□□ -1.02
SREK1-213ENST00000523655 CCDC82Q8N4S0 544 aa8.71□□□□□ -1.02
SREK1-213ENST00000523655 TNFRSF10BO14763 440 aa8.7□□□□□ -1.02
SREK1-213ENST00000523655 FURINP09958 794 aa8.7□□□□□ -1.02
SREK1-213ENST00000523655 CPB1P15086 417 aa8.7□□□□□ -1.02
SREK1-213ENST00000523655 PSAPL1Q6NUJ1 521 aa8.7□□□□□ -1.02
SREK1-213ENST00000523655 HFE2Q6ZVN8 426 aa8.7□□□□□ -1.02
SREK1-213ENST00000523655 JPH1Q9HDC5 661 aaPredicted RBP8.7□□□□□ -1.02
SREK1-213ENST00000523655 SERPINA10Q9UK55 444 aa8.7□□□□□ -1.02
SREK1-213ENST00000523655 CARNS1A5YM72 827 aa8.69□□□□□ -1.02
SREK1-213ENST00000523655 PIK3R2O00459 728 aa8.69□□□□□ -1.02
SREK1-213ENST00000523655 GRIK4Q16099 956 aa8.69□□□□□ -1.02
SREK1-213ENST00000523655 C16orf46Q6P387 395 aa8.69□□□□□ -1.02
SREK1-213ENST00000523655 SEPT3Q9UH03 358 aa8.69□□□□□ -1.02
SREK1-213ENST00000523655 RARAP10276 462 aa8.68□□□□□ -1.02
SREK1-213ENST00000523655 EPB42P16452 691 aa8.68□□□□□ -1.02
SREK1-213ENST00000523655 TRAPPC3LQ5T215 181 aa8.68□□□□□ -1.02
SREK1-213ENST00000523655 FAM35AQ86V20 835 aa8.68□□□□□ -1.02
SREK1-213ENST00000523655 ALYREFQ86V81 257 aaKnown RBP8.68□□□□□ -1.02
SREK1-213ENST00000523655 KCNMB2Q9Y691 235 aa8.68□□□□□ -1.02
SREK1-213ENST00000523655 ZBTB39O15060 712 aa8.67□□□□□ -1.02
SREK1-213ENST00000523655 LILRB5O75023 590 aa8.67□□□□□ -1.02
SREK1-213ENST00000523655 XYLBO75191 536 aa8.67□□□□□ -1.02
SREK1-213ENST00000523655 AFF1P51825 1210 aaKnown RBP8.67□□□□□ -1.02
SREK1-213ENST00000523655 DHX32Q7L7V1 743 aaKnown RBP8.67□□□□□ -1.02
SREK1-213ENST00000523655 CLP1Q92989 425 aaKnown RBP8.67□□□□□ -1.02
SREK1-213ENST00000523655 PRDM6Q9NQX0 595 aa8.67□□□□□ -1.02
SREK1-213ENST00000523655 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.67□□□□□ -1.029e-7■■■■■ 28.2
SREK1-213ENST00000523655 SPATA31C1P0DKV0 1188 aa8.66□□□□□ -1.02
SREK1-213ENST00000523655 DOC2BQ14184 412 aa8.66□□□□□ -1.02
SREK1-213ENST00000523655 PERM1Q5SV97 790 aa8.66□□□□□ -1.02
SREK1-213ENST00000523655 J3QW42 95 aa8.65□□□□□ -1.02
SREK1-213ENST00000523655 ADAM23O75077 832 aa8.65□□□□□ -1.02
SREK1-213ENST00000523655 ATP2B4P23634 1241 aa8.65□□□□□ -1.02
SREK1-213ENST00000523655 TRIP4Q15650 581 aaPredicted RBP8.65□□□□□ -1.02
SREK1-213ENST00000523655 DMRTC2Q8IXT2 367 aaPredicted RBP8.65□□□□□ -1.02
SREK1-213ENST00000523655 LPIN3Q9BQK8 851 aa8.65□□□□□ -1.02
SREK1-213ENST00000523655 LOC100996750A0A140TA64 210 aa8.64□□□□□ -1.03
SREK1-213ENST00000523655 MMP20O60882 483 aa8.64□□□□□ -1.03
SREK1-213ENST00000523655 RGS9O75916 674 aaPredicted RBP8.64□□□□□ -1.03
SREK1-213ENST00000523655 MAP3K6O95382 1288 aa8.64□□□□□ -1.03
SREK1-213ENST00000523655 TRIM28Q13263 835 aaKnown RBP8.64□□□□□ -1.03
SREK1-213ENST00000523655 PRRT3Q5FWE3 981 aa8.64□□□□□ -1.03
SREK1-213ENST00000523655 KRTAP4-6Q9BYQ5 205 aa8.64□□□□□ -1.03
SREK1-213ENST00000523655 A0A0A0MRY4 1105 aa8.63□□□□□ -1.03
SREK1-213ENST00000523655 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
SREK1-213ENST00000523655 SHISA2Q6UWI4 295 aa8.63□□□□□ -1.03
SREK1-213ENST00000523655 TRPM4Q8TD43 1214 aa8.63□□□□□ -1.03
SREK1-213ENST00000523655 NSUN5Q96P11 429 aaKnown RBP8.63□□□□□ -1.03
SREK1-213ENST00000523655 GRIK5Q16478 980 aa8.62□□□□□ -1.03
SREK1-213ENST00000523655 ATCAYQ86WG3 371 aa8.62□□□□□ -1.03
SREK1-213ENST00000523655 GPR152Q8TDT2 470 aa8.62□□□□□ -1.03
SREK1-213ENST00000523655 EFCC1Q9HA90 598 aa8.62□□□□□ -1.03
SREK1-213ENST00000523655 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
SREK1-213ENST00000523655 EGFRP00533 1210 aa8.61□□□□□ -1.03
SREK1-213ENST00000523655 ZAP70P43403 619 aa8.61□□□□□ -1.03
SREK1-213ENST00000523655 GATA4P43694 442 aa8.61□□□□□ -1.03
SREK1-213ENST00000523655 ELMSAN1Q6PJG2 1045 aa8.61□□□□□ -1.03
SREK1-213ENST00000523655 COL26A1Q96A83 441 aa8.61□□□□□ -1.03
SREK1-213ENST00000523655 SMG9Q9H0W8 520 aaKnown RBP8.61□□□□□ -1.03
SREK1-213ENST00000523655 SPDYE3A6NKU9 549 aa8.6□□□□□ -1.03
SREK1-213ENST00000523655 K7ELQ4 463 aaPredicted RBP8.6□□□□□ -1.03
SREK1-213ENST00000523655 SELPP16109 830 aa8.6□□□□□ -1.03
SREK1-213ENST00000523655 EIF2AK2P19525 551 aaKnown RBP8.6□□□□□ -1.03
SREK1-213ENST00000523655 GPLD1P80108 840 aa8.6□□□□□ -1.03
SREK1-213ENST00000523655 TMEM88BA6NKF7 163 aa8.59□□□□□ -1.03
SREK1-213ENST00000523655 APBA3O96018 575 aa8.59□□□□□ -1.03
SREK1-213ENST00000523655 COL13A1Q5TAT6 717 aaPredicted RBP8.59□□□□□ -1.03
SREK1-213ENST00000523655 ILDR2Q71H61 639 aa8.59□□□□□ -1.03
SREK1-213ENST00000523655 STIM2Q9P246 746 aa8.59□□□□□ -1.03
SREK1-213ENST00000523655 LOC102724428A0A0B4J2F2 783 aa8.58□□□□□ -1.04
SREK1-213ENST00000523655 UBAP1LF5GYI3 381 aa8.58□□□□□ -1.04
SREK1-213ENST00000523655 PTCD1O75127 700 aaKnown RBP8.58□□□□□ -1.04
SREK1-213ENST00000523655 ITGB7P26010 798 aa8.58□□□□□ -1.04
SREK1-213ENST00000523655 SIK1P57059 783 aa8.58□□□□□ -1.04
SREK1-213ENST00000523655 MTMR3Q13615 1198 aa8.58□□□□□ -1.04
SREK1-213ENST00000523655 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.58□□□□□ -1.04
SREK1-213ENST00000523655 PSAPP07602 524 aa8.57□□□□□ -1.04
SREK1-213ENST00000523655 NRLP54845 237 aa8.57□□□□□ -1.04
SREK1-213ENST00000523655 MSL1Q68DK7 614 aa8.57□□□□□ -1.04
SREK1-213ENST00000523655 PLD4Q96BZ4 506 aa8.57□□□□□ -1.04
SREK1-213ENST00000523655 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
SREK1-213ENST00000523655 CYP2E1P05181 493 aaPredicted RBP8.56□□□□□ -1.04
SREK1-213ENST00000523655 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
SREK1-213ENST00000523655 NLRP13Q86W25 1043 aa8.56□□□□□ -1.04
SREK1-213ENST00000523655 FMR1NBQ8N0W7 255 aaPredicted RBP8.56□□□□□ -1.04
SREK1-213ENST00000523655 PIK3R5Q8WYR1 880 aa8.56□□□□□ -1.04
SREK1-213ENST00000523655 C11orf16Q9NQ32 467 aa8.56□□□□□ -1.04
SREK1-213ENST00000523655 A6NHS1 94 aa8.55□□□□□ -1.04
SREK1-213ENST00000523655 PCSK7Q16549 785 aa8.55□□□□□ -1.04
SREK1-213ENST00000523655 SEMA6BQ9H3T3 888 aa8.55□□□□□ -1.04
SREK1-213ENST00000523655 FRRS1LQ9P0K9 344 aa8.55□□□□□ -1.04
SREK1-213ENST00000523655 ELNP15502 786 aa8.54□□□□□ -1.04
SREK1-213ENST00000523655 RAC1P63000 192 aa8.54□□□□□ -1.04
SREK1-213ENST00000523655 ADAMTSL4Q6UY14 1074 aa8.54□□□□□ -1.04
SREK1-213ENST00000523655 WFDC8Q8IUA0 241 aa8.54□□□□□ -1.04
SREK1-213ENST00000523655 NUDT16Q96DE0 195 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms