RNA–Protein interactions for RNA: ENST00000523313.1

CASC9-204, Transcript of cancer susceptibility 9, humanhuman

TSL 2

Gene CASC9, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-204ENST00000523313 H0YGN5 161 aa11.27□□□□□ -0.61
CASC9-204ENST00000523313 FKTNO75072 461 aa11.27□□□□□ -0.61
CASC9-204ENST00000523313 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
CASC9-204ENST00000523313 RBM17Q96I25 401 aaKnown RBP11.27□□□□□ -0.61
CASC9-204ENST00000523313 RTFDC1Q9BY42 306 aaPredicted RBP11.27□□□□□ -0.61
CASC9-204ENST00000523313 A0A0C4DFX4 3053 aa11.27□□□□□ -0.61
CASC9-204ENST00000523313 ASTN2O75129 1339 aaPredicted RBP11.27□□□□□ -0.61
CASC9-204ENST00000523313 TRIOBPQ9H2D6 2365 aa11.26□□□□□ -0.61
CASC9-204ENST00000523313 NBPF26B4DH59 902 aa11.26□□□□□ -0.61
CASC9-204ENST00000523313 KIAA2012Q0VF49 1180 aa11.26□□□□□ -0.61
CASC9-204ENST00000523313 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
CASC9-204ENST00000523313 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
CASC9-204ENST00000523313 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
CASC9-204ENST00000523313 CDCA5Q96FF9 252 aa11.26□□□□□ -0.61
CASC9-204ENST00000523313 ATP6V0A2Q9Y487 856 aa11.26□□□□□ -0.61
CASC9-204ENST00000523313 TRIM17Q9Y577 477 aa11.26□□□□□ -0.61
CASC9-204ENST00000523313 BRCA2P51587 3418 aa11.26□□□□□ -0.61
CASC9-204ENST00000523313 MKRN3Q13064 507 aaKnown RBP11.25□□□□□ -0.61
CASC9-204ENST00000523313 CHRDL2Q6WN34 429 aa11.25□□□□□ -0.61
CASC9-204ENST00000523313 MOB2Q70IA6 237 aa11.25□□□□□ -0.61
CASC9-204ENST00000523313 SUPT20HQ8NEM7 779 aa11.25□□□□□ -0.61
CASC9-204ENST00000523313 POLR3GLQ9BT43 218 aa11.25□□□□□ -0.61
CASC9-204ENST00000523313 NYXQ9GZU5 481 aa11.25□□□□□ -0.61
CASC9-204ENST00000523313 GGA3Q9NZ52 723 aa11.25□□□□□ -0.61
CASC9-204ENST00000523313 COL6A3P12111 3177 aa11.25□□□□□ -0.61
CASC9-204ENST00000523313 PSMD14O00487 310 aa11.24□□□□□ -0.61
CASC9-204ENST00000523313 RGL2O15211 777 aa11.24□□□□□ -0.61
CASC9-204ENST00000523313 TM4SF4P48230 202 aa11.24□□□□□ -0.61
CASC9-204ENST00000523313 DPP8Q6V1X1 898 aaPredicted RBP11.24□□□□□ -0.61
CASC9-204ENST00000523313 OTOP1Q7RTM1 612 aa11.24□□□□□ -0.61
CASC9-204ENST00000523313 MORC1Q86VD1 984 aa11.24□□□□□ -0.61
CASC9-204ENST00000523313 SULF1Q8IWU6 871 aa11.24□□□□□ -0.61
CASC9-204ENST00000523313 DPF2Q92785 391 aa11.24□□□□□ -0.61
CASC9-204ENST00000523313 TMX4Q9H1E5 349 aaPredicted RBP11.24□□□□□ -0.61
CASC9-204ENST00000523313 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
CASC9-204ENST00000523313 CENPFP49454 3210 aa11.24□□□□□ -0.61
CASC9-204ENST00000523313 SIPA1L3O60292 1781 aaPredicted RBP11.23□□□□□ -0.61
CASC9-204ENST00000523313 POLR2AP24928 1970 aaKnown RBP11.23□□□□□ -0.61
CASC9-204ENST00000523313 UBE2Q2LH0YL09 131 aa11.23□□□□□ -0.61
CASC9-204ENST00000523313 GPTP24298 496 aa11.23□□□□□ -0.61
CASC9-204ENST00000523313 MNX1P50219 401 aaPredicted RBP11.23□□□□□ -0.61
CASC9-204ENST00000523313 MPNDQ8N594 471 aa11.23□□□□□ -0.61
CASC9-204ENST00000523313 UBN2Q6ZU65 1347 aa11.23□□□□□ -0.61
CASC9-204ENST00000523313 RBBP6Q7Z6E9 1792 aaKnown RBP11.23□□□□□ -0.61
CASC9-204ENST00000523313 BTBD11A6QL63 1104 aa11.22□□□□□ -0.61
CASC9-204ENST00000523313 ABCC4O15439 1325 aa11.22□□□□□ -0.61
CASC9-204ENST00000523313 KIF4BQ2VIQ3 1234 aa11.22□□□□□ -0.61
CASC9-204ENST00000523313 SUSD4Q5VX71 490 aa11.22□□□□□ -0.61
CASC9-204ENST00000523313 CUL9Q8IWT3 2517 aa11.22□□□□□ -0.61
CASC9-204ENST00000523313 PITPNM2Q9BZ72 1349 aa11.21□□□□□ -0.61
CASC9-204ENST00000523313 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.61
CASC9-204ENST00000523313 SNRPA1P09661 255 aaKnown RBP11.21□□□□□ -0.61
CASC9-204ENST00000523313 NGEFQ8N5V2 710 aa11.21□□□□□ -0.61
CASC9-204ENST00000523313 CFHR5Q9BXR6 569 aa11.21□□□□□ -0.61
CASC9-204ENST00000523313 KCNQ5Q9NR82 932 aa11.21□□□□□ -0.61
CASC9-204ENST00000523313 SCAF8Q9UPN6 1271 aaKnown RBP11.21□□□□□ -0.61
CASC9-204ENST00000523313 NTSR2O95665 410 aa11.2□□□□□ -0.62
CASC9-204ENST00000523313 FKBP1BP68106 108 aa11.2□□□□□ -0.62
CASC9-204ENST00000523313 ARMC5Q96C12 935 aa11.2□□□□□ -0.62
CASC9-204ENST00000523313 PANK3Q9H999 370 aa11.2□□□□□ -0.62
CASC9-204ENST00000523313 DBNDD1Q9H9R9 158 aa11.2□□□□□ -0.62
CASC9-204ENST00000523313 PTPN22Q9Y2R2 807 aa11.2□□□□□ -0.62
CASC9-204ENST00000523313 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
CASC9-204ENST00000523313 DUOX1Q9NRD9 1551 aa11.2□□□□□ -0.62
CASC9-204ENST00000523313 CEMIPQ8WUJ3 1361 aa11.19□□□□□ -0.62
CASC9-204ENST00000523313 IBTKQ9P2D0 1353 aaPredicted RBP11.19□□□□□ -0.62
CASC9-204ENST00000523313 ANGEL2Q5VTE6 544 aaKnown RBP11.19□□□□□ -0.62
CASC9-204ENST00000523313 SP8Q8IXZ3 490 aa11.19□□□□□ -0.62
CASC9-204ENST00000523313 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
CASC9-204ENST00000523313 RANBP2P49792 3224 aaKnown RBP11.18□□□□□ -0.62
CASC9-204ENST00000523313 RPS12P25398 132 aaKnown RBP11.18□□□□□ -0.62
CASC9-204ENST00000523313 SREBF2Q12772 1141 aa11.18□□□□□ -0.62
CASC9-204ENST00000523313 PRAMEF18Q5VWM3 479 aa11.18□□□□□ -0.62
CASC9-204ENST00000523313 TTLL7Q6ZT98 887 aa11.18□□□□□ -0.62
CASC9-204ENST00000523313 NLRP3Q96P20 1036 aa11.18□□□□□ -0.62
CASC9-204ENST00000523313 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
CASC9-204ENST00000523313 MAP3K15Q6ZN16 1313 aa11.17□□□□□ -0.62
CASC9-204ENST00000523313 ERVV-1B6SEH8 477 aa11.17□□□□□ -0.62
CASC9-204ENST00000523313 RIMBP2O15034 1052 aa11.17□□□□□ -0.62
CASC9-204ENST00000523313 CAP1Q01518 475 aa11.17□□□□□ -0.62
CASC9-204ENST00000523313 SCARF1Q14162 830 aa11.17□□□□□ -0.62
CASC9-204ENST00000523313 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
CASC9-204ENST00000523313 CD99L2Q8TCZ2 262 aa11.17□□□□□ -0.62
CASC9-204ENST00000523313 SOX1O00570 391 aaPredicted RBP11.16□□□□□ -0.62
CASC9-204ENST00000523313 BBOX1O75936 387 aa11.16□□□□□ -0.62
CASC9-204ENST00000523313 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
CASC9-204ENST00000523313 DOK7Q18PE1 504 aa11.16□□□□□ -0.62
CASC9-204ENST00000523313 WASHC4Q2M389 1173 aa11.16□□□□□ -0.62
CASC9-204ENST00000523313 ZNF34Q8IZ26 560 aa11.16□□□□□ -0.62
CASC9-204ENST00000523313 ZNF333Q96JL9 665 aa11.16□□□□□ -0.62
CASC9-204ENST00000523313 COL25A1Q9BXS0 654 aaPredicted RBP11.16□□□□□ -0.62
CASC9-204ENST00000523313 PRO3102Q9H379 93 aa11.16□□□□□ -0.62
CASC9-204ENST00000523313 ZBTB3Q9H5J0 574 aa11.16□□□□□ -0.62
CASC9-204ENST00000523313 ZNF609O15014 1411 aa11.16□□□□□ -0.62
CASC9-204ENST00000523313 CEP290O15078 2479 aa11.15□□□□□ -0.62
CASC9-204ENST00000523313 ECE2O60344 883 aa11.15□□□□□ -0.62
CASC9-204ENST00000523313 MYCP01106 439 aaPredicted RBP11.15□□□□□ -0.62
CASC9-204ENST00000523313 LRCH3Q96II8 777 aa11.15□□□□□ -0.62
CASC9-204ENST00000523313 NUP98P52948 1817 aa11.14□□□□□ -0.63
CASC9-204ENST00000523313 DIAPH1O60610 1272 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms