RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 KDF1Q8NAX2 398 aaPredicted RBP10.15□□□□□ -0.78
SDCBP-210ENST00000522843 ENAMQ9NRM1 1142 aa10.15□□□□□ -0.78
SDCBP-210ENST00000522843 CUEDC1Q9NWM3 386 aaPredicted RBP10.15□□□□□ -0.78
SDCBP-210ENST00000522843 BTG4Q9NY30 223 aa10.15□□□□□ -0.78
SDCBP-210ENST00000522843 SBNO1A3KN83 1393 aa10.14□□□□□ -0.79
SDCBP-210ENST00000522843 GAS6Q14393 721 aa10.14□□□□□ -0.79
SDCBP-210ENST00000522843 DZIP3Q86Y13 1208 aaKnown RBP10.14□□□□□ -0.79
SDCBP-210ENST00000522843 PNMA1Q8ND90 353 aa10.14□□□□□ -0.79
SDCBP-210ENST00000522843 FAM117AQ9C073 453 aa10.14□□□□□ -0.79
SDCBP-210ENST00000522843 STK26Q9P289 416 aa10.14□□□□□ -0.79
SDCBP-210ENST00000522843 NRXN1Q9ULB1 1477 aa10.14□□□□□ -0.79
SDCBP-210ENST00000522843 ADGRB2O60241 1585 aa10.14□□□□□ -0.79
SDCBP-210ENST00000522843 NINLQ9Y2I6 1382 aa10.14□□□□□ -0.79
SDCBP-210ENST00000522843 ADGRF5Q8IZF2 1346 aa10.13□□□□□ -0.79
SDCBP-210ENST00000522843 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.13□□□□□ -0.79
SDCBP-210ENST00000522843 KNDC1Q76NI1 1749 aa10.13□□□□□ -0.79
SDCBP-210ENST00000522843 PARD3Q8TEW0 1356 aa10.13□□□□□ -0.79
SDCBP-210ENST00000522843 ABCC11Q96J66 1382 aa10.13□□□□□ -0.79
SDCBP-210ENST00000522843 RPGRIP1LQ68CZ1 1315 aa10.12□□□□□ -0.79
SDCBP-210ENST00000522843 COL14A1Q05707 1796 aaKnown RBP10.12□□□□□ -0.79
SDCBP-210ENST00000522843 AP1G2O75843 785 aa10.12□□□□□ -0.79
SDCBP-210ENST00000522843 APBA3O96018 575 aa10.12□□□□□ -0.79
SDCBP-210ENST00000522843 RNF144AP50876 292 aaPredicted RBP10.12□□□□□ -0.79
SDCBP-210ENST00000522843 PRICKLE2Q7Z3G6 844 aa10.12□□□□□ -0.79
SDCBP-210ENST00000522843 PROCA1Q8NCQ7 364 aaPredicted RBP10.12□□□□□ -0.79
SDCBP-210ENST00000522843 GMCL1Q96IK5 515 aa10.12□□□□□ -0.79
SDCBP-210ENST00000522843 IFT172Q9UG01 1749 aa10.12□□□□□ -0.79
SDCBP-210ENST00000522843 ARHGEF10O15013 1369 aa10.12□□□□□ -0.79
SDCBP-210ENST00000522843 TRPM3Q9HCF6 1732 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-210ENST00000522843 ESPNB1AK53 854 aa10.11□□□□□ -0.79
SDCBP-210ENST00000522843 KCNQ2O43526 872 aa10.11□□□□□ -0.79
SDCBP-210ENST00000522843 PSME1Q06323 249 aa10.11□□□□□ -0.79
SDCBP-210ENST00000522843 SH3D19Q5HYK7 790 aa10.11□□□□□ -0.79
SDCBP-210ENST00000522843 TMEM132EQ6IEE7 984 aa10.11□□□□□ -0.79
SDCBP-210ENST00000522843 EPS8L1Q8TE68 723 aa10.11□□□□□ -0.79
SDCBP-210ENST00000522843 SPON1Q9HCB6 807 aa10.11□□□□□ -0.79
SDCBP-210ENST00000522843 CRYBG1Q9Y4K1 1723 aa10.1□□□□□ -0.79
SDCBP-210ENST00000522843 ALS2Q96Q42 1657 aa10.1□□□□□ -0.79
SDCBP-210ENST00000522843 MBIPQ9NS73 344 aa10.1□□□□□ -0.79
SDCBP-210ENST00000522843 SPATA31A1Q5TZJ5 1347 aa10.09□□□□□ -0.79
SDCBP-210ENST00000522843 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
SDCBP-210ENST00000522843 RRBP1Q9P2E9 1410 aaKnown RBP10.09□□□□□ -0.79
SDCBP-210ENST00000522843 ITGAEP38570 1179 aa10.09□□□□□ -0.79
SDCBP-210ENST00000522843 C1QTNF8P60827 252 aa10.09□□□□□ -0.79
SDCBP-210ENST00000522843 FOXR1Q6PIV2 292 aa10.09□□□□□ -0.79
SDCBP-210ENST00000522843 FAM196AQ6ZSG2 479 aa10.09□□□□□ -0.79
SDCBP-210ENST00000522843 TRIM22Q8IYM9 498 aa10.09□□□□□ -0.79
SDCBP-210ENST00000522843 PPP1R1BQ9UD71 204 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-210ENST00000522843 NRKQ7Z2Y5 1582 aa10.09□□□□□ -0.79
SDCBP-210ENST00000522843 PHF20L1A8MW92 1017 aa10.08□□□□□ -0.8
SDCBP-210ENST00000522843 RHOQP17081 205 aa10.08□□□□□ -0.8
SDCBP-210ENST00000522843 ZNF837Q96EG3 531 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-210ENST00000522843 PDGFDQ9GZP0 370 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-210ENST00000522843 CASZ1Q86V15 1759 aa10.08□□□□□ -0.8
SDCBP-210ENST00000522843 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
SDCBP-210ENST00000522843 NBPF8Q3BBV2 869 aa10.07□□□□□ -0.8
SDCBP-210ENST00000522843 BEND7Q8N7W2 519 aaPredicted RBP10.07□□□□□ -0.8
SDCBP-210ENST00000522843 PMFBP1Q8TBY8 1022 aa10.07□□□□□ -0.8
SDCBP-210ENST00000522843 CYLDQ9NQC7 956 aa10.07□□□□□ -0.8
SDCBP-210ENST00000522843 CNTNAP5Q8WYK1 1306 aa10.07□□□□□ -0.8
SDCBP-210ENST00000522843 MYOM1P52179 1685 aa10.06□□□□□ -0.8
SDCBP-210ENST00000522843 DBN1Q16643 649 aa10.06□□□□□ -0.8
SDCBP-210ENST00000522843 DDRGK1Q96HY6 314 aa10.06□□□□□ -0.8
SDCBP-210ENST00000522843 HMX1Q9NP08 348 aaPredicted RBP10.06□□□□□ -0.8
SDCBP-210ENST00000522843 GPR25O00155 361 aa10.05□□□□□ -0.8
SDCBP-210ENST00000522843 MSTNO14793 375 aa10.05□□□□□ -0.8
SDCBP-210ENST00000522843 PLA2G4EQ3MJ16 856 aa10.05□□□□□ -0.8
SDCBP-210ENST00000522843 SIRT1Q96EB6 747 aa10.05□□□□□ -0.8
SDCBP-210ENST00000522843 DCAF5Q96JK2 942 aa10.05□□□□□ -0.8
SDCBP-210ENST00000522843 PIK3C2GO75747 1445 aa10.05□□□□□ -0.8
SDCBP-210ENST00000522843 ATP5J2-PTCD1G3V325 749 aa10.04□□□□□ -0.8
SDCBP-210ENST00000522843 BCRP11274 1271 aa10.04□□□□□ -0.8
SDCBP-210ENST00000522843 GPC1P35052 558 aa10.04□□□□□ -0.8
SDCBP-210ENST00000522843 CHRNA2Q15822 529 aa10.04□□□□□ -0.8
SDCBP-210ENST00000522843 RIPOR1Q6ZS17 1223 aa10.04□□□□□ -0.8
SDCBP-210ENST00000522843 SPATA31E1Q6ZUB1 1445 aa10.04□□□□□ -0.8
SDCBP-210ENST00000522843 KIAA0232Q92628 1395 aa10.03□□□□□ -0.8
SDCBP-210ENST00000522843 H7C1W4 665 aa10.03□□□□□ -0.8
SDCBP-210ENST00000522843 USP17L8P0C7I0 530 aa10.03□□□□□ -0.8
SDCBP-210ENST00000522843 ANKARQ7Z5J8 1434 aa10.03□□□□□ -0.8
SDCBP-210ENST00000522843 PODNQ7Z5L7 613 aa10.03□□□□□ -0.8
SDCBP-210ENST00000522843 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
SDCBP-210ENST00000522843 PRDM11Q9NQV5 511 aa10.03□□□□□ -0.8
SDCBP-210ENST00000522843 DYRK1BQ9Y463 629 aa10.03□□□□□ -0.8
SDCBP-210ENST00000522843 PRR36Q9H6K5 1346 aa10.03□□□□□ -0.8
SDCBP-210ENST00000522843 ACIN1Q9UKV3 1341 aaKnown RBP10.03□□□□□ -0.8
SDCBP-210ENST00000522843 CHD4Q14839 1912 aa10.02□□□□□ -0.81
SDCBP-210ENST00000522843 SAFB2Q14151 953 aaKnown RBP eCLIP10.02□□□□□ -0.81
SDCBP-210ENST00000522843 PTF1AQ7RTS3 328 aa10.02□□□□□ -0.81
SDCBP-210ENST00000522843 STRN4Q9NRL3 753 aa10.02□□□□□ -0.81
SDCBP-210ENST00000522843 PEAK1Q9H792 1746 aa10.02□□□□□ -0.81
SDCBP-210ENST00000522843 SSH2Q76I76 1423 aa10.01□□□□□ -0.81
SDCBP-210ENST00000522843 MEN1O00255 615 aa10.01□□□□□ -0.81
SDCBP-210ENST00000522843 ZBTB7AO95365 584 aa10.01□□□□□ -0.81
SDCBP-210ENST00000522843 RGL3Q3MIN7 710 aa10.01□□□□□ -0.81
SDCBP-210ENST00000522843 GTPBP3Q969Y2 492 aaKnown RBP10.01□□□□□ -0.81
SDCBP-210ENST00000522843 ACDQ96AP0 544 aa10.01□□□□□ -0.81
SDCBP-210ENST00000522843 PRAM1Q96QH2 718 aa10.01□□□□□ -0.81
SDCBP-210ENST00000522843 SPOCK3Q9BQ16 436 aa10.01□□□□□ -0.81
SDCBP-210ENST00000522843 SYT17Q9BSW7 474 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms