RNA–Protein interactions for RNA: ENST00000522574.5

TNIP1-215, Transcript of TNFAIP3 interacting protein 1, human

TSL 2

Gene TNIP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNIP1-215	ENST00000522574	ANKRD36C	Q5JPF3	1778 aa		11.8	□□□□□ -0.52
TNIP1-215	ENST00000522574	CASZ1	Q86V15	1759 aa		11.8	□□□□□ -0.52
TNIP1-215	ENST00000522574	CHD4	Q14839	1912 aa		11.8	□□□□□ -0.52
TNIP1-215	ENST00000522574	HOXA10	P31260	410 aa	Predicted RBP	11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	SSH3	Q8TE77	659 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	CD2AP	Q9Y5K6	639 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	RTL9	Q8NET4	1388 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	ABCC12	Q96J65	1359 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574		H0YIN7	160 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	SRGAP3	O43295	1099 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	HMMR	O75330	724 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	TGFB2	P61812	414 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	IFIT5	Q13325	482 aa	Known RBP	11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	CCDC57	Q2TAC2	916 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	C3orf67	Q6ZVT6	689 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	SIRT2	Q8IXJ6	389 aa		11.79	□□□□□ -0.52
TNIP1-215	ENST00000522574	COL24A1	Q17RW2	1714 aa		11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	CEP350	Q5VT06	3117 aa		11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	PNMA6E	A0A0J9YXQ4	647 aa		11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	SRGN	P10124	158 aa		11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	HDAC1	Q13547	482 aa	Predicted RBP	11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	POLA2	Q14181	598 aa		11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	DDX46	Q7L014	1031 aa	Known RBP	11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	PELP1	Q8IZL8	1130 aa	Known RBP	11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	CRAMP1	Q96RY5	1269 aa		11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	RWDD1	Q9H446	243 aa	Predicted RBP	11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	GREM2	Q9H772	168 aa		11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.78	□□□□□ -0.52
TNIP1-215	ENST00000522574	ANKRD18B	A2A2Z9	1011 aa		11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	NPR1	P16066	1061 aa		11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	ITGA6	P23229	1130 aa		11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	ALDH1B1	P30837	517 aa		11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	RFX5	P48382	616 aa	Predicted RBP	11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	C2CD5	Q86YS7	1000 aa		11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	RPGR	Q92834	1020 aa	Known RBP	11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	MASTL	Q96GX5	879 aa		11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	RBM17	Q96I25	401 aa	Known RBP	11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	PPP4R2	Q9NY27	417 aa		11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	CHMP3	Q9Y3E7	222 aa		11.77	□□□□□ -0.53
TNIP1-215	ENST00000522574	AFDN	P55196	1824 aa	Known RBP	11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	NRXN2	Q9P2S2	1712 aa		11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	BBOX1	O75936	387 aa		11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	RPS8	P62241	208 aa	Known RBP	11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	PTPN12	Q05209	780 aa	Known RBP	11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	FAM161A	Q3B820	660 aa		11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	STYK1	Q6J9G0	422 aa		11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	CDC5L	Q99459	802 aa	Known RBP	11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	SYT17	Q9BSW7	474 aa		11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	COPRS	Q9NQ92	184 aa		11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	FBXO3	Q9UK99	471 aa		11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	NOP58	Q9Y2X3	529 aa	Known RBP	11.76	□□□□□ -0.53
TNIP1-215	ENST00000522574	CNKSR1	Q969H4	720 aa		11.75	□□□□□ -0.53
TNIP1-215	ENST00000522574	DCTPP1	Q9H773	170 aa		11.75	□□□□□ -0.53
TNIP1-215	ENST00000522574	SEC31B	Q9NQW1	1179 aa		11.75	□□□□□ -0.53
TNIP1-215	ENST00000522574	C10orf71	Q711Q0	1435 aa		11.75	□□□□□ -0.53
TNIP1-215	ENST00000522574	UTRN	P46939	3433 aa		11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574		A0A0G2JLW4	131 aa		11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	IGHD	P01880	384 aa		11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	KCNA3	P22001	575 aa		11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	IGHMBP2	P38935	993 aa	Known RBP	11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	GRAP	Q13588	217 aa		11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	HSP90AB4P	Q58FF6	505 aa		11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	TAF7L	Q5H9L4	462 aa		11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	LDHAL6A	Q6ZMR3	332 aa		11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	ANKRD18A	Q8IVF6	992 aa		11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	GRAPL	Q8TC17	118 aa	Predicted RBP	11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.74	□□□□□ -0.53	1e-9	■■■□□ 15.4
TNIP1-215	ENST00000522574	BSDC1	Q9NW68	430 aa	Predicted RBP	11.74	□□□□□ -0.53
TNIP1-215	ENST00000522574	RAB11FIP3	O75154	756 aa		11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	SURF6	O75683	361 aa	Known RBP	11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	CIAO1	O76071	339 aa		11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	DPEP1	P16444	411 aa		11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	CHRNA5	P30532	468 aa		11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	TMC4	Q7Z404	712 aa		11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	ZNF594	Q96JF6	807 aa	Predicted RBP	11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	CCDC136	Q96JN2	1154 aa		11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	MPHOSPH8	Q99549	860 aa		11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	RIPOR2	Q9Y4F9	1068 aa		11.73	□□□□□ -0.53
TNIP1-215	ENST00000522574	EYA2	O00167	538 aa		11.72	□□□□□ -0.53
TNIP1-215	ENST00000522574	KLHDC4	Q8TBB5	520 aa		11.72	□□□□□ -0.53
TNIP1-215	ENST00000522574	CELF1	Q92879	486 aa	Known RBP	11.72	□□□□□ -0.53
TNIP1-215	ENST00000522574	GCC1	Q96CN9	775 aa		11.72	□□□□□ -0.53
TNIP1-215	ENST00000522574	PIM2	Q9P1W9	311 aa		11.72	□□□□□ -0.53
TNIP1-215	ENST00000522574	PA2G4	Q9UQ80	394 aa	Known RBP	11.72	□□□□□ -0.53
TNIP1-215	ENST00000522574	IL15	P40933	162 aa	Predicted RBP	11.71	□□□□□ -0.53
TNIP1-215	ENST00000522574	ATG9A	Q7Z3C6	839 aa		11.71	□□□□□ -0.53
TNIP1-215	ENST00000522574	SP8	Q8IXZ3	490 aa		11.71	□□□□□ -0.53
TNIP1-215	ENST00000522574	SMC5	Q8IY18	1101 aa		11.71	□□□□□ -0.53
TNIP1-215	ENST00000522574	TTLL6	Q8N841	843 aa		11.71	□□□□□ -0.53
TNIP1-215	ENST00000522574	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.71	□□□□□ -0.53
TNIP1-215	ENST00000522574	CNNM1	Q9NRU3	951 aa		11.71	□□□□□ -0.53
TNIP1-215	ENST00000522574	GTF3C3	Q9Y5Q9	886 aa		11.71	□□□□□ -0.53
TNIP1-215	ENST00000522574	DDX60	Q8IY21	1712 aa	Known RBP	11.71	□□□□□ -0.54
TNIP1-215	ENST00000522574	LRRC24	Q50LG9	513 aa		11.7	□□□□□ -0.54
TNIP1-215	ENST00000522574	ERC1	Q8IUD2	1116 aa		11.7	□□□□□ -0.54
TNIP1-215	ENST00000522574	PUS3	Q9BZE2	481 aa	Known RBP	11.7	□□□□□ -0.54
TNIP1-215	ENST00000522574	SIL1	Q9H173	461 aa		11.7	□□□□□ -0.54
TNIP1-215	ENST00000522574	CEP126	Q9P2H0	1117 aa		11.7	□□□□□ -0.54

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