RNA–Protein interactions for RNA: ENST00000521902.5

RUNX1T1-238, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-238	ENST00000521902	USP48	Q86UV5	1035 aa		18.96	■□□□□ 0.63
RUNX1T1-238	ENST00000521902	MPND	Q8N594	471 aa		18.96	■□□□□ 0.63
RUNX1T1-238	ENST00000521902	UTP14A	Q9BVJ6	771 aa	Known RBP	18.96	■□□□□ 0.63
RUNX1T1-238	ENST00000521902	ABCC4	O15439	1325 aa		18.96	■□□□□ 0.63
RUNX1T1-238	ENST00000521902	PPP2R1A	P30153	589 aa		18.95	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	HUNK	P57058	714 aa		18.95	■□□□□ 0.62
RUNX1T1-238	ENST00000521902		H7C1D1	291 aa		18.94	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	TRPM7	Q96QT4	1865 aa		18.93	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	SHTN1	A0MZ66	631 aa		18.93	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	YDJC	A8MPS7	323 aa		18.93	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	FAM155A	B1AL88	458 aa	Predicted RBP	18.93	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	CCER1	Q8TC90	406 aa	Predicted RBP	18.93	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	SAGE1	Q9NXZ1	904 aa		18.93	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	ERBB4	Q15303	1308 aa		18.93	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	RGMB	Q6NW40	437 aa		18.92	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	DLK2	Q6UY11	383 aa		18.92	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	LRP10	Q7Z4F1	713 aa		18.92	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	MICALL2	Q8IY33	904 aa		18.92	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	DPF2	Q92785	391 aa		18.92	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	CCDC102A	Q96A19	550 aa		18.91	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	CASP8AP2	Q9UKL3	1982 aa		18.9	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	PDIA6	Q15084	440 aa		18.9	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	DDX46	Q7L014	1031 aa	Known RBP	18.9	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	SAMD7	Q7Z3H4	446 aa		18.9	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.9	■□□□□ 0.62
RUNX1T1-238	ENST00000521902	NEFM	P07197	916 aa		18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	HCLS1	P14317	486 aa	Predicted RBP	18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	KIF23	Q02241	960 aa	Predicted RBP	18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	GRAP	Q13588	217 aa		18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	KRT26	Q7Z3Y9	468 aa		18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	C2orf69	Q8N8R5	385 aa		18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	GRAPL	Q8TC17	118 aa	Predicted RBP	18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	THUMPD2	Q9BTF0	503 aa	Known RBP	18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	GBA2	Q9HCG7	927 aa	Predicted RBP	18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	RNF186	Q9NXI6	227 aa		18.89	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	TNRC18	O15417	2968 aa	Predicted RBP	18.88	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	SOX10	P56693	466 aa		18.88	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	TRPA1	O75762	1119 aa		18.87	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	NUP98	P52948	1817 aa		18.87	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	TMC4	Q7Z404	712 aa		18.87	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	NLRP10	Q86W26	655 aa		18.87	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	PLEKHF1	Q96S99	279 aa		18.87	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	PSMD14	O00487	310 aa		18.86	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	EGFR	P00533	1210 aa		18.86	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	EIF2S2	P20042	333 aa	Known RBP	18.86	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	ZNF157	P51786	506 aa	Predicted RBP	18.86	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	NFE2L2	Q16236	605 aa		18.86	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.86	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	HSP90AB3P	Q58FF7	597 aa		18.86	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	DCPS	Q96C86	337 aa	Known RBP	18.86	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	PDE4DIP	Q5VU43	2346 aa		18.85	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	WASHC4	Q2M389	1173 aa		18.85	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	PROSER3	Q2NL68	480 aa		18.85	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	CSRNP1	Q96S65	589 aa		18.85	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	TRMT112	Q9UI30	125 aa	Known RBP	18.85	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	ADM5	C9JUS6	153 aa		18.84	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	RPS12	P25398	132 aa	Known RBP	18.84	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	TCIRG1	Q13488	830 aa		18.84	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	COPS6	Q7L5N1	327 aa		18.84	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	SH3TC1	Q8TE82	1336 aa		18.83	■□□□□ 0.61
RUNX1T1-238	ENST00000521902	ANXA1	P04083	346 aa		18.83	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	RBM26	Q5T8P6	1007 aa	Known RBP	18.83	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	PRPF38B	Q5VTL8	546 aa	Known RBP	18.83	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	CTU1	Q7Z7A3	348 aa	Known RBP	18.83	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	DBNDD1	Q9H9R9	158 aa		18.83	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	TSPYL4	Q9UJ04	414 aa		18.83	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.83	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	LAMB4	A4D0S4	1761 aa		18.83	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	SLC10A3	P09131	477 aa		18.82	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	REM2	Q8IYK8	340 aa	Predicted RBP	18.82	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	KCNQ5	Q9NR82	932 aa		18.82	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	RIMBP2	O15034	1052 aa		18.81	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	XAGE3	Q8WTP9	111 aa		18.81	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	POLL	Q9UGP5	575 aa		18.81	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	AIMP1	Q12904	312 aa	Known RBP	18.8	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	SULF1	Q8IWU6	871 aa		18.8	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	BABAM1	Q9NWV8	329 aa		18.8	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	C6orf229	H3BNL8	230 aa		18.79	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	SF3B3	Q15393	1217 aa	Known RBP	18.79	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	CELF1	Q92879	486 aa	Known RBP	18.79	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	RTL9	Q8NET4	1388 aa		18.79	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	ECE2	O60344	883 aa		18.78	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	VIL1	P09327	827 aa	Known RBP	18.78	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	GPSM2	P81274	684 aa		18.78	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	DOK7	Q18PE1	504 aa		18.78	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	KIF4B	Q2VIQ3	1234 aa		18.78	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	PNN	Q9H307	717 aa	Known RBP	18.78	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	HPS5	Q9UPZ3	1129 aa		18.78	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	KDM3B	Q7LBC6	1761 aa		18.78	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	PKN2	Q16513	984 aa	Known RBP	18.77	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	CDCA5	Q96FF9	252 aa		18.77	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	EYA3	Q99504	573 aa		18.77	■□□□□ 0.6
RUNX1T1-238	ENST00000521902	DUOX1	Q9NRD9	1551 aa		18.76	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	RASAL3	Q86YV0	1011 aa		18.76	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	TBC1D16	Q8TBP0	767 aa		18.76	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	NECTIN2	Q92692	538 aa		18.76	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	GGA3	Q9NZ52	723 aa		18.76	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	ASTN2	O75129	1339 aa	Predicted RBP	18.75	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	FKBP1B	P68106	108 aa		18.75	■□□□□ 0.59
RUNX1T1-238	ENST00000521902	ZNF428	Q96B54	188 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms