RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 C3orf67Q6ZVT6 689 aa27.43■■□□□ 1.98
PTP4A3-204ENST00000521578 SUCLG2Q96I99 432 aa27.42■■□□□ 1.98
PTP4A3-204ENST00000521578 TNRC6CQ9HCJ0 1690 aaKnown RBP27.42■■□□□ 1.98
PTP4A3-204ENST00000521578 GNAI3P08754 354 aa27.41■■□□□ 1.98
PTP4A3-204ENST00000521578 NLRP3Q96P20 1036 aa27.41■■□□□ 1.98
PTP4A3-204ENST00000521578 PDE8AO60658 829 aa27.41■■□□□ 1.98
PTP4A3-204ENST00000521578 DDRGK1Q96HY6 314 aa27.41■■□□□ 1.98
PTP4A3-204ENST00000521578 HSP90B1P14625 803 aaKnown RBP27.4■■□□□ 1.98
PTP4A3-204ENST00000521578 EPHA10Q5JZY3 1008 aa27.4■■□□□ 1.98
PTP4A3-204ENST00000521578 PDE6BP35913 854 aa27.39■■□□□ 1.98
PTP4A3-204ENST00000521578 KAZALD1Q96I82 304 aa27.39■■□□□ 1.98
PTP4A3-204ENST00000521578 LRRFIP2Q9Y608 721 aaKnown RBP27.39■■□□□ 1.98
PTP4A3-204ENST00000521578 LAMB2P55268 1798 aa27.39■■□□□ 1.98
PTP4A3-204ENST00000521578 CCDC85AQ96PX6 553 aaPredicted RBP27.38■■□□□ 1.97
PTP4A3-204ENST00000521578 PLA2G12BQ9BX93 195 aa27.38■■□□□ 1.97
PTP4A3-204ENST00000521578 CD2APQ9Y5K6 639 aa27.38■■□□□ 1.97
PTP4A3-204ENST00000521578 KIF13BQ9NQT8 1826 aa27.38■■□□□ 1.97
PTP4A3-204ENST00000521578 RIC1Q4ADV7 1423 aa27.38■■□□□ 1.97
PTP4A3-204ENST00000521578 FHDC1Q9C0D6 1143 aaPredicted RBP27.38■■□□□ 1.97
PTP4A3-204ENST00000521578 C1orf115Q9H7X2 142 aa27.38■■□□□ 1.97
PTP4A3-204ENST00000521578 CHRNA5P30532 468 aa27.37■■□□□ 1.97
PTP4A3-204ENST00000521578 CTSWP56202 376 aa27.37■■□□□ 1.97
PTP4A3-204ENST00000521578 FOXO4P98177 505 aa27.37■■□□□ 1.97
PTP4A3-204ENST00000521578 BICC1Q9H694 974 aaKnown RBP27.37■■□□□ 1.97
PTP4A3-204ENST00000521578 C2CD5Q86YS7 1000 aa27.36■■□□□ 1.97
PTP4A3-204ENST00000521578 LRP5O75197 1615 aa27.36■■□□□ 1.97
PTP4A3-204ENST00000521578 MYH3P11055 1940 aa27.36■■□□□ 1.97
PTP4A3-204ENST00000521578 GOLGB1Q14789 3259 aaKnown RBP27.36■■□□□ 1.97
PTP4A3-204ENST00000521578 KLRG2A4D1S0 409 aaPredicted RBP27.36■■□□□ 1.97
PTP4A3-204ENST00000521578 GNAI2P04899 355 aa27.36■■□□□ 1.97
PTP4A3-204ENST00000521578 LMBR1LQ6UX01 489 aa27.35■■□□□ 1.97
PTP4A3-204ENST00000521578 TTLL11Q8NHH1 800 aa27.35■■□□□ 1.97
PTP4A3-204ENST00000521578 A0A0G2JLW4 131 aa27.34■■□□□ 1.97
PTP4A3-204ENST00000521578 H0YIN7 160 aa27.34■■□□□ 1.97
PTP4A3-204ENST00000521578 CRY2Q49AN0 593 aa27.34■■□□□ 1.97
PTP4A3-204ENST00000521578 HDAC5Q9UQL6 1122 aa27.34■■□□□ 1.97
PTP4A3-204ENST00000521578 CHMP3Q9Y3E7 222 aa27.34■■□□□ 1.97
PTP4A3-204ENST00000521578 DPEP1P16444 411 aa27.33■■□□□ 1.97
PTP4A3-204ENST00000521578 SF3B3Q15393 1217 aaKnown RBP27.33■■□□□ 1.97
PTP4A3-204ENST00000521578 NLGN2Q8NFZ4 835 aa27.33■■□□□ 1.97
PTP4A3-204ENST00000521578 COL11A2P13942 1736 aaPredicted RBP27.33■■□□□ 1.97
PTP4A3-204ENST00000521578 SRGNP10124 158 aa27.33■■□□□ 1.96
PTP4A3-204ENST00000521578 TGFB2P61812 414 aa27.33■■□□□ 1.96
PTP4A3-204ENST00000521578 NUCB1Q02818 461 aa27.33■■□□□ 1.96
PTP4A3-204ENST00000521578 CCDC152Q4G0S7 254 aa27.33■■□□□ 1.96
PTP4A3-204ENST00000521578 ANKRD44Q8N8A2 993 aa27.33■■□□□ 1.96
PTP4A3-204ENST00000521578 RPGRQ92834 1020 aaKnown RBP27.33■■□□□ 1.96
PTP4A3-204ENST00000521578 CSF1RP07333 972 aa27.32■■□□□ 1.96
PTP4A3-204ENST00000521578 GREM2Q9H772 168 aa27.32■■□□□ 1.96
PTP4A3-204ENST00000521578 ZNF622Q969S3 477 aaKnown RBP eCLIP27.31■■□□□ 1.96
PTP4A3-204ENST00000521578 SYT17Q9BSW7 474 aa27.31■■□□□ 1.96
PTP4A3-204ENST00000521578 GCC1Q96CN9 775 aa27.3■■□□□ 1.96
PTP4A3-204ENST00000521578 NPR1P16066 1061 aa27.3■■□□□ 1.96
PTP4A3-204ENST00000521578 RABL6Q3YEC7 729 aaPredicted RBP27.3■■□□□ 1.96
PTP4A3-204ENST00000521578 MASTLQ96GX5 879 aa27.3■■□□□ 1.96
PTP4A3-204ENST00000521578 SEC31BQ9NQW1 1179 aa27.3■■□□□ 1.96
PTP4A3-204ENST00000521578 KIAA1551Q9HCM1 1747 aa27.29■■□□□ 1.96
PTP4A3-204ENST00000521578 DDX46Q7L014 1031 aaKnown RBP27.29■■□□□ 1.96
PTP4A3-204ENST00000521578 RBM17Q96I25 401 aaKnown RBP27.29■■□□□ 1.96
PTP4A3-204ENST00000521578 WWC3Q9ULE0 1092 aa27.29■■□□□ 1.96
PTP4A3-204ENST00000521578 TAF1P21675 1872 aa27.28■■□□□ 1.96
PTP4A3-204ENST00000521578 KCNA3P22001 575 aa27.28■■□□□ 1.96
PTP4A3-204ENST00000521578 ITGA6P23229 1130 aa27.27■■□□□ 1.96
PTP4A3-204ENST00000521578 HOXA10P31260 410 aaPredicted RBP27.27■■□□□ 1.96
PTP4A3-204ENST00000521578 SIRT2Q8IXJ6 389 aa27.27■■□□□ 1.96
PTP4A3-204ENST00000521578 STYK1Q6J9G0 422 aa27.26■■□□□ 1.95
PTP4A3-204ENST00000521578 CHD1LQ86WJ1 897 aa27.25■■□□□ 1.95
PTP4A3-204ENST00000521578 DLEC1Q9Y238 1755 aa27.25■■□□□ 1.95
PTP4A3-204ENST00000521578 SEC24BO95487 1268 aa27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 IFIT5Q13325 482 aaKnown RBP27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 CCDC57Q2TAC2 916 aa27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 CELF1Q92879 486 aaKnown RBP27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 SRGAP3O43295 1099 aa27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 CEP85Q6P2H3 762 aa27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 CRAMP1Q96RY5 1269 aa27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 PIM2Q9P1W9 311 aa27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 RTL9Q8NET4 1388 aa27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 COL4A1P02462 1669 aa27.24■■□□□ 1.95
PTP4A3-204ENST00000521578 CACNA1SQ13698 1873 aa27.23■■□□□ 1.95
PTP4A3-204ENST00000521578 PNMA6EA0A0J9YXQ4 647 aa27.23■■□□□ 1.95
PTP4A3-204ENST00000521578 ANKRD18BA2A2Z9 1011 aa27.23■■□□□ 1.95
PTP4A3-204ENST00000521578 ALDH1B1P30837 517 aa27.23■■□□□ 1.95
PTP4A3-204ENST00000521578 MTX1Q13505 466 aa27.22■■□□□ 1.95
PTP4A3-204ENST00000521578 GRAPQ13588 217 aa27.22■■□□□ 1.95
PTP4A3-204ENST00000521578 GRAPLQ8TC17 118 aaPredicted RBP27.22■■□□□ 1.95
PTP4A3-204ENST00000521578 CNKSR1Q969H4 720 aa27.22■■□□□ 1.95
PTP4A3-204ENST00000521578 ZNF594Q96JF6 807 aaPredicted RBP27.22■■□□□ 1.95
PTP4A3-204ENST00000521578 ATP8B2P98198 1209 aa27.21■■□□□ 1.95
PTP4A3-204ENST00000521578 TTLL6Q8N841 843 aa27.21■■□□□ 1.95
PTP4A3-204ENST00000521578 CDC5LQ99459 802 aaKnown RBP27.21■■□□□ 1.95
PTP4A3-204ENST00000521578 KLHDC4Q8TBB5 520 aa27.21■■□□□ 1.95
PTP4A3-204ENST00000521578 RPS8P62241 208 aaKnown RBP27.2■■□□□ 1.94
PTP4A3-204ENST00000521578 TAF7LQ5H9L4 462 aa27.2■■□□□ 1.94
PTP4A3-204ENST00000521578 PRPF40BQ6NWY9 871 aaKnown RBP27.2■■□□□ 1.94
PTP4A3-204ENST00000521578 ANKRD18AQ8IVF6 992 aa27.2■■□□□ 1.94
PTP4A3-204ENST00000521578 RPAP2Q8IXW5 612 aaPredicted RBP27.2■■□□□ 1.94
PTP4A3-204ENST00000521578 BRCA1P38398 1863 aaKnown RBP27.19■■□□□ 1.94
PTP4A3-204ENST00000521578 SLX4Q8IY92 1834 aa27.19■■□□□ 1.94
PTP4A3-204ENST00000521578 RFX5P48382 616 aaPredicted RBP27.19■■□□□ 1.94
PTP4A3-204ENST00000521578 DALRD3Q5D0E6 543 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms