RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 DHX32Q7L7V1 743 aaKnown RBP6.17□□□□□ -1.42
VPS13B-209ENST00000521559 KRT25Q7Z3Z0 450 aa6.17□□□□□ -1.42
VPS13B-209ENST00000521559 SAP130Q9H0E3 1048 aa6.17□□□□□ -1.42
VPS13B-209ENST00000521559 C1orf115Q9H7X2 142 aa6.17□□□□□ -1.42
VPS13B-209ENST00000521559 KRBA1A5PL33 1030 aa6.16□□□□□ -1.42
VPS13B-209ENST00000521559 RGS9O75916 674 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-209ENST00000521559 SASH3O75995 380 aa6.16□□□□□ -1.42
VPS13B-209ENST00000521559 TARSP26639 723 aaKnown RBP6.16□□□□□ -1.42
VPS13B-209ENST00000521559 C20orf204Q6ZNR8 217 aa6.16□□□□□ -1.42
VPS13B-209ENST00000521559 ETFBKMTQ8IXQ9 262 aa6.16□□□□□ -1.42
VPS13B-209ENST00000521559 TRPM4Q8TD43 1214 aa6.16□□□□□ -1.42
VPS13B-209ENST00000521559 TRIM11Q96F44 468 aa6.16□□□□□ -1.42
VPS13B-209ENST00000521559 STARD13Q9Y3M8 1113 aa6.16□□□□□ -1.42
VPS13B-209ENST00000521559 TNFRSF10BO14763 440 aa6.15□□□□□ -1.42
VPS13B-209ENST00000521559 RPLP1P05386 114 aaKnown RBP6.15□□□□□ -1.42
VPS13B-209ENST00000521559 PSAPP07602 524 aa6.15□□□□□ -1.42
VPS13B-209ENST00000521559 GRNP28799 593 aaKnown RBP6.15□□□□□ -1.42
VPS13B-209ENST00000521559 NRLP54845 237 aa6.15□□□□□ -1.42
VPS13B-209ENST00000521559 GPLD1P80108 840 aa6.15□□□□□ -1.42
VPS13B-209ENST00000521559 TRIM28Q13263 835 aaKnown RBP6.15□□□□□ -1.42
VPS13B-209ENST00000521559 PSAPL1Q6NUJ1 521 aa6.15□□□□□ -1.42
VPS13B-209ENST00000521559 FAM35AQ86V20 835 aa6.15□□□□□ -1.42
VPS13B-209ENST00000521559 JPH1Q9HDC5 661 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-209ENST00000521559 TLR7Q9NYK1 1049 aaKnown RBP6.15□□□□□ -1.42
VPS13B-209ENST00000521559 FRRS1LQ9P0K9 344 aa6.15□□□□□ -1.42
VPS13B-209ENST00000521559 APBA3O96018 575 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 ZAP70P43403 619 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 PLAURQ03405 335 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 PDE4CQ08493 712 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 TRAPPC3LQ5T215 181 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 B4GALNT3Q6L9W6 998 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 ELMSAN1Q6PJG2 1045 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 CAPN12Q6ZSI9 719 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 NLRP13Q86W25 1043 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 NACC1Q96RE7 527 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 RBSNQ9H1K0 784 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 ZFATQ9P243 1243 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 KCNMB2Q9Y691 235 aa6.14□□□□□ -1.43
VPS13B-209ENST00000521559 TMEM88BA6NKF7 163 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 UBAP1LF5GYI3 381 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 NID1P14543 1247 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 CPB1P15086 417 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 PCSK2P16519 638 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 SSFA2P28290 1259 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 SOX18P35713 384 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 RAC1P63000 192 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 TTC16Q8NEE8 873 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 HELQQ8TDG4 1101 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 NUDT8Q8WV74 236 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 TTC9Q92623 222 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 SPOCK3Q9BQ16 436 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 SLAIN2Q9P270 581 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 USTQ9Y2C2 406 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 USP20Q9Y2K6 914 aa6.13□□□□□ -1.43
VPS13B-209ENST00000521559 GHRHP01286 108 aa6.12□□□□□ -1.43
VPS13B-209ENST00000521559 TTC39BQ5VTQ0 682 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-209ENST00000521559 ALKBH2Q6NS38 261 aa6.12□□□□□ -1.43
VPS13B-209ENST00000521559 SEPT3Q9UH03 358 aa6.12□□□□□ -1.43
VPS13B-209ENST00000521559 C1QTNF9BB2RNN3 333 aa6.11□□□□□ -1.43
VPS13B-209ENST00000521559 HOXD8P13378 290 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-209ENST00000521559 COL9A3Q14050 684 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-209ENST00000521559 NOM1Q5C9Z4 860 aaKnown RBP6.11□□□□□ -1.43
VPS13B-209ENST00000521559 C8orf86Q6ZUL3 223 aa6.11□□□□□ -1.43
VPS13B-209ENST00000521559 GPR152Q8TDT2 470 aa6.11□□□□□ -1.43
VPS13B-209ENST00000521559 LOC102724428A0A0B4J2F2 783 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 ZBTB42B2RXF5 422 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 MMP20O60882 483 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 EIF2AK2P19525 551 aaKnown RBP6.1□□□□□ -1.43
VPS13B-209ENST00000521559 AFF1P51825 1210 aaKnown RBP6.1□□□□□ -1.43
VPS13B-209ENST00000521559 SIK1P57059 783 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 PERM1Q5SV97 790 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 CD163Q86VB7 1156 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 CACTIN-AS1Q8N1I8 211 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 DTWD1Q8N5C7 304 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 GTF3C2Q8WUA4 911 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-209ENST00000521559 SPACA7Q96KW9 195 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 LPIN3Q9BQK8 851 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 NAGPAQ9UK23 515 aa6.1□□□□□ -1.43
VPS13B-209ENST00000521559 C9orf172C9J069 976 aa6.09□□□□□ -1.43
VPS13B-209ENST00000521559 SUPT5HO00267 1087 aaKnown RBP6.09□□□□□ -1.43
VPS13B-209ENST00000521559 ZBTB39O15060 712 aa6.09□□□□□ -1.43
VPS13B-209ENST00000521559 ITGB2P05107 769 aa6.09□□□□□ -1.43
VPS13B-209ENST00000521559 ELNP15502 786 aa6.09□□□□□ -1.43
VPS13B-209ENST00000521559 GATA4P43694 442 aa6.09□□□□□ -1.43
VPS13B-209ENST00000521559 MLLT1Q03111 559 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-209ENST00000521559 HYAL2Q12891 473 aa6.09□□□□□ -1.43
VPS13B-209ENST00000521559 SF3B2Q13435 895 aaKnown RBP6.09□□□□□ -1.43
VPS13B-209ENST00000521559 FAM26DQ5JW98 314 aa6.09□□□□□ -1.43
VPS13B-209ENST00000521559 MSL1Q68DK7 614 aa6.09□□□□□ -1.43
VPS13B-209ENST00000521559 PDE12Q6L8Q7 609 aaKnown RBP6.09□□□□□ -1.43
VPS13B-209ENST00000521559 WFDC8Q8IUA0 241 aa6.09□□□□□ -1.43
VPS13B-209ENST00000521559 SMG9Q9H0W8 520 aaKnown RBP6.09□□□□□ -1.43
VPS13B-209ENST00000521559 A0A0A0MRY4 1105 aa6.08□□□□□ -1.44
VPS13B-209ENST00000521559 FAM13AO94988 1023 aa6.08□□□□□ -1.44
VPS13B-209ENST00000521559 PROCP04070 461 aa6.08□□□□□ -1.44
VPS13B-209ENST00000521559 CHRNA4P43681 627 aa6.08□□□□□ -1.44
VPS13B-209ENST00000521559 NRG1Q02297 640 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-209ENST00000521559 AAMPQ13685 434 aa6.08□□□□□ -1.44
VPS13B-209ENST00000521559 TRIP4Q15650 581 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-209ENST00000521559 HFE2Q6ZVN8 426 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 494.7 ms