RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 KHNYNO15037 678 aaKnown RBP6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 PTCD1O75127 700 aaKnown RBP6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 LGR5O75473 907 aa6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 SSTR4P31391 388 aa6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 GP2P55259 537 aaKnown RBP6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 C1orf53Q5VUE5 145 aa6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 MICALL1Q8N3F8 863 aa6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 CHMP7Q8WUX9 453 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 ZDHHC3Q9NYG2 299 aa6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 ZNF232Q9UNY5 417 aa6.1□□□□□ -1.43
HMGB1P41-201ENST00000520234 FAM157BP0CG42 384 aa6.09□□□□□ -1.43
HMGB1P41-201ENST00000520234 PLA2G4AP47712 749 aa6.09□□□□□ -1.43
HMGB1P41-201ENST00000520234 FKBP5Q13451 457 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P41-201ENST00000520234 PHLDB3Q6NSJ2 640 aa6.09□□□□□ -1.43
HMGB1P41-201ENST00000520234 ZDHHC1Q8WTX9 485 aa6.09□□□□□ -1.43
HMGB1P41-201ENST00000520234 STARD13Q9Y3M8 1113 aa6.09□□□□□ -1.43
HMGB1P41-201ENST00000520234 GPC6Q9Y625 555 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P41-201ENST00000520234 SIN3BO75182 1162 aa6.08□□□□□ -1.44
HMGB1P41-201ENST00000520234 ALBP02768 609 aa6.08□□□□□ -1.44
HMGB1P41-201ENST00000520234 TATP17735 454 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P41-201ENST00000520234 ATP4AP20648 1035 aa6.08□□□□□ -1.44
HMGB1P41-201ENST00000520234 ARID4AP29374 1257 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P41-201ENST00000520234 KCNA1Q09470 495 aa6.08□□□□□ -1.44
HMGB1P41-201ENST00000520234 TRAPPC3LQ5T215 181 aa6.08□□□□□ -1.44
HMGB1P41-201ENST00000520234 SYT9Q86SS6 491 aa6.08□□□□□ -1.44
HMGB1P41-201ENST00000520234 AIDAQ96BJ3 306 aa6.08□□□□□ -1.44
HMGB1P41-201ENST00000520234 A0A0A0MRY4 1105 aa6.07□□□□□ -1.44
HMGB1P41-201ENST00000520234 RAC1P63000 192 aa6.07□□□□□ -1.44
HMGB1P41-201ENST00000520234 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
HMGB1P41-201ENST00000520234 C8orf86Q6ZUL3 223 aa6.07□□□□□ -1.44
HMGB1P41-201ENST00000520234 MARK1Q9P0L2 795 aa6.07□□□□□ -1.44
HMGB1P41-201ENST00000520234 USP21Q9UK80 565 aa6.07□□□□□ -1.44
HMGB1P41-201ENST00000520234 PARP3Q9Y6F1 533 aa6.07□□□□□ -1.44
HMGB1P41-201ENST00000520234 KIAA1324LA8MWY0 1029 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P41-201ENST00000520234 HIF1AQ16665 826 aa6.06□□□□□ -1.44
HMGB1P41-201ENST00000520234 SHISA2Q6UWI4 295 aa6.06□□□□□ -1.44
HMGB1P41-201ENST00000520234 ALDH16A1Q8IZ83 802 aa6.06□□□□□ -1.44
HMGB1P41-201ENST00000520234 CCER1Q8TC90 406 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P41-201ENST00000520234 TNFRSF25Q93038 417 aa6.06□□□□□ -1.44
HMGB1P41-201ENST00000520234 MYO19Q96H55 970 aa6.06□□□□□ -1.44
HMGB1P41-201ENST00000520234 PHACTR1Q9C0D0 580 aa6.06□□□□□ -1.44
HMGB1P41-201ENST00000520234 HCN4Q9Y3Q4 1203 aa6.06□□□□□ -1.44
HMGB1P41-201ENST00000520234 A0A1W2PNR3 127 aa6.05□□□□□ -1.44
HMGB1P41-201ENST00000520234 RTN1Q16799 776 aa6.05□□□□□ -1.44
HMGB1P41-201ENST00000520234 SH3PXD2AQ5TCZ1 1133 aa6.05□□□□□ -1.44
HMGB1P41-201ENST00000520234 PRR23CQ6ZRP0 262 aa6.05□□□□□ -1.44
HMGB1P41-201ENST00000520234 GNEQ9Y223 722 aaKnown RBP6.05□□□□□ -1.44
HMGB1P41-201ENST00000520234 TXLNAP40222 546 aa6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 ARSJQ5FYB0 599 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 C16orf46Q6P387 395 aa6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 BICDL1Q6ZP65 573 aa6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 TXNDC2Q86VQ3 553 aa6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 RHPN1Q8TCX5 695 aa6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 NGLY1Q96IV0 654 aa6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 MKNK1Q9BUB5 465 aa6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 NEUROD4Q9HD90 331 aa6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 ANKIB1Q9P2G1 1089 aa6.04□□□□□ -1.44
HMGB1P41-201ENST00000520234 EFSO43281 561 aa6.03□□□□□ -1.44
HMGB1P41-201ENST00000520234 FSTP19883 344 aa6.03□□□□□ -1.44
HMGB1P41-201ENST00000520234 SAMD5Q5TGI4 173 aa6.03□□□□□ -1.44
HMGB1P41-201ENST00000520234 C7orf43Q8WVR3 580 aa6.03□□□□□ -1.44
HMGB1P41-201ENST00000520234 QTRT2Q9H974 415 aaKnown RBP6.03□□□□□ -1.44
HMGB1P41-201ENST00000520234 SEPT3Q9UH03 358 aa6.03□□□□□ -1.44
HMGB1P41-201ENST00000520234 EGFL7Q9UHF1 273 aa6.03□□□□□ -1.44
HMGB1P41-201ENST00000520234 LILRB5O75023 590 aa6.02□□□□□ -1.45
HMGB1P41-201ENST00000520234 C11orf91Q3C1V1 193 aa6.02□□□□□ -1.45
HMGB1P41-201ENST00000520234 COX20Q5RI15 118 aa6.02□□□□□ -1.45
HMGB1P41-201ENST00000520234 C20orf204Q6ZNR8 217 aa6.02□□□□□ -1.45
HMGB1P41-201ENST00000520234 CAPN12Q6ZSI9 719 aa6.02□□□□□ -1.45
HMGB1P41-201ENST00000520234 GTF3C2Q8WUA4 911 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P41-201ENST00000520234 ZIC5Q96T25 663 aa6.02□□□□□ -1.45
HMGB1P41-201ENST00000520234 STRN4Q9NRL3 753 aa6.02□□□□□ -1.45
HMGB1P41-201ENST00000520234 BRD2P25440 801 aaKnown RBP6.01□□□□□ -1.45
HMGB1P41-201ENST00000520234 ADH7P40394 386 aa6.01□□□□□ -1.45
HMGB1P41-201ENST00000520234 SF3B2Q13435 895 aaKnown RBP6.01□□□□□ -1.45
HMGB1P41-201ENST00000520234 NAA30Q147X3 362 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P41-201ENST00000520234 IER5Q5VY09 327 aa6.01□□□□□ -1.45
HMGB1P41-201ENST00000520234 AEBP1Q8IUX7 1158 aa6.01□□□□□ -1.45
HMGB1P41-201ENST00000520234 HELQQ8TDG4 1101 aa6.01□□□□□ -1.45
HMGB1P41-201ENST00000520234 GJA3Q9Y6H8 435 aa6.01□□□□□ -1.45
HMGB1P41-201ENST00000520234 SCNN1AP37088 669 aa6□□□□□ -1.45
HMGB1P41-201ENST00000520234 FKBP4Q02790 459 aaKnown RBP eCLIP6□□□□□ -1.45
HMGB1P41-201ENST00000520234 DGKZQ13574 1117 aa6□□□□□ -1.45
HMGB1P41-201ENST00000520234 SUSD3Q96L08 255 aa6□□□□□ -1.45
HMGB1P41-201ENST00000520234 SAP130Q9H0E3 1048 aa6□□□□□ -1.45
HMGB1P41-201ENST00000520234 STIM2Q9P246 746 aa6□□□□□ -1.45
HMGB1P41-201ENST00000520234 ZBTB7CA1YPR0 619 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 TGFBR3LH3BV60 316 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 ABL1P00519 1130 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 C8AP07357 584 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 OGFOD2Q6N063 350 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 FMR1NBQ8N0W7 255 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 ABTB2Q8N961 1025 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 WFDC12Q8WWY7 111 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 IFT43Q96FT9 208 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 KLK14Q9P0G3 267 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 LRFN2Q9ULH4 789 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 IVNS1ABPQ9Y6Y0 642 aa5.99□□□□□ -1.45
HMGB1P41-201ENST00000520234 TNFRSF10BO14763 440 aa5.98□□□□□ -1.45
HMGB1P41-201ENST00000520234 ICMTO60725 284 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms