RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 COL11A2P13942 1736 aaPredicted RBP17.81■□□□□ 0.44
VPS37A-206ENST00000520140 A0A0G2JLW4 131 aa17.81■□□□□ 0.44
VPS37A-206ENST00000520140 PDE6BP35913 854 aa17.81■□□□□ 0.44
VPS37A-206ENST00000520140 PLA2G12BQ9BX93 195 aa17.81■□□□□ 0.44
VPS37A-206ENST00000520140 C2CD5Q86YS7 1000 aa17.8■□□□□ 0.44
VPS37A-206ENST00000520140 FHDC1Q9C0D6 1143 aaPredicted RBP17.8■□□□□ 0.44
VPS37A-206ENST00000520140 CHMP4BQ9H444 224 aaKnown RBP17.8■□□□□ 0.44
VPS37A-206ENST00000520140 SEC31BQ9NQW1 1179 aa17.8■□□□□ 0.44
VPS37A-206ENST00000520140 CACNA1SQ13698 1873 aa17.8■□□□□ 0.44
VPS37A-206ENST00000520140 HSP90B1P14625 803 aaKnown RBP17.8■□□□□ 0.44
VPS37A-206ENST00000520140 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
VPS37A-206ENST00000520140 KIF13BQ9NQT8 1826 aa17.79■□□□□ 0.44
VPS37A-206ENST00000520140 PNMA6EA0A0J9YXQ4 647 aa17.79■□□□□ 0.44
VPS37A-206ENST00000520140 CCDC152Q4G0S7 254 aa17.79■□□□□ 0.44
VPS37A-206ENST00000520140 NLGN2Q8NFZ4 835 aa17.79■□□□□ 0.44
VPS37A-206ENST00000520140 KLHDC4Q8TBB5 520 aa17.79■□□□□ 0.44
VPS37A-206ENST00000520140 ZNF622Q969S3 477 aaKnown RBP eCLIP17.79■□□□□ 0.44
VPS37A-206ENST00000520140 HDAC5Q9UQL6 1122 aa17.79■□□□□ 0.44
VPS37A-206ENST00000520140 COL4A1P02462 1669 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 H0YIN7 160 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 SRGAP3O43295 1099 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 PCDHB15Q9Y5E8 787 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 CSF1RP07333 972 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 SRGNP10124 158 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 DPEP1P16444 411 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 ITGA6P23229 1130 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
VPS37A-206ENST00000520140 RABL6Q3YEC7 729 aaPredicted RBP17.78■□□□□ 0.44
VPS37A-206ENST00000520140 CEP85Q6P2H3 762 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 ZNF594Q96JF6 807 aaPredicted RBP17.78■□□□□ 0.44
VPS37A-206ENST00000520140 SPEF2Q9C093 1822 aa17.78■□□□□ 0.44
VPS37A-206ENST00000520140 CRY2Q49AN0 593 aa17.77■□□□□ 0.44
VPS37A-206ENST00000520140 KLRG2A4D1S0 409 aaPredicted RBP17.77■□□□□ 0.43
VPS37A-206ENST00000520140 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.43
VPS37A-206ENST00000520140 CCDC57Q2TAC2 916 aa17.77■□□□□ 0.43
VPS37A-206ENST00000520140 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.43
VPS37A-206ENST00000520140 RIC1Q4ADV7 1423 aa17.76■□□□□ 0.43
VPS37A-206ENST00000520140 SLC51AQ86UW1 340 aa17.76■□□□□ 0.43
VPS37A-206ENST00000520140 SIRT2Q8IXJ6 389 aa17.76■□□□□ 0.43
VPS37A-206ENST00000520140 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
VPS37A-206ENST00000520140 CELF1Q92879 486 aaKnown RBP17.75■□□□□ 0.43
VPS37A-206ENST00000520140 PA2G4Q9UQ80 394 aaKnown RBP17.75■□□□□ 0.43
VPS37A-206ENST00000520140 MASTLQ96GX5 879 aa17.75■□□□□ 0.43
VPS37A-206ENST00000520140 SIL1Q9H173 461 aa17.75■□□□□ 0.43
VPS37A-206ENST00000520140 KIAA1551Q9HCM1 1747 aa17.75■□□□□ 0.43
VPS37A-206ENST00000520140 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
VPS37A-206ENST00000520140 ANKRD18BA2A2Z9 1011 aa17.74■□□□□ 0.43
VPS37A-206ENST00000520140 NPR1P16066 1061 aa17.74■□□□□ 0.43
VPS37A-206ENST00000520140 KCNA3P22001 575 aa17.74■□□□□ 0.43
VPS37A-206ENST00000520140 ATP8B2P98198 1209 aa17.74■□□□□ 0.43
VPS37A-206ENST00000520140 TAF7LQ5H9L4 462 aa17.74■□□□□ 0.43
VPS37A-206ENST00000520140 RBM17Q96I25 401 aaKnown RBP17.74■□□□□ 0.43
VPS37A-206ENST00000520140 SYT17Q9BSW7 474 aa17.74■□□□□ 0.43
VPS37A-206ENST00000520140 TGFB2P61812 414 aa17.74■□□□□ 0.43
VPS37A-206ENST00000520140 MTX1Q13505 466 aa17.72■□□□□ 0.43
VPS37A-206ENST00000520140 RPAP2Q8IXW5 612 aaPredicted RBP17.72■□□□□ 0.43
VPS37A-206ENST00000520140 BCL11AQ9H165 835 aa17.72■□□□□ 0.43
VPS37A-206ENST00000520140 DLEC1Q9Y238 1755 aa17.72■□□□□ 0.43
VPS37A-206ENST00000520140 LRP5O75197 1615 aa17.72■□□□□ 0.43
VPS37A-206ENST00000520140 SLX4Q8IY92 1834 aa17.72■□□□□ 0.43
VPS37A-206ENST00000520140 HOXA10P31260 410 aaPredicted RBP17.72■□□□□ 0.43
VPS37A-206ENST00000520140 RFX5P48382 616 aaPredicted RBP17.72■□□□□ 0.43
VPS37A-206ENST00000520140 OLFM4Q6UX06 510 aa17.72■□□□□ 0.43
VPS37A-206ENST00000520140 PUS3Q9BZE2 481 aaKnown RBP17.72■□□□□ 0.43
VPS37A-206ENST00000520140 PTPN12Q05209 780 aaKnown RBP17.71■□□□□ 0.43
VPS37A-206ENST00000520140 GRAPQ13588 217 aa17.71■□□□□ 0.43
VPS37A-206ENST00000520140 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
VPS37A-206ENST00000520140 GRAPLQ8TC17 118 aaPredicted RBP17.71■□□□□ 0.43
VPS37A-206ENST00000520140 APBB1O00213 710 aa17.71■□□□□ 0.42
VPS37A-206ENST00000520140 RPS8P62241 208 aaKnown RBP17.71■□□□□ 0.42
VPS37A-206ENST00000520140 PRPF40BQ6NWY9 871 aaKnown RBP17.71■□□□□ 0.42
VPS37A-206ENST00000520140 SSH3Q8TE77 659 aa17.71■□□□□ 0.42
VPS37A-206ENST00000520140 CDC5LQ99459 802 aaKnown RBP17.71■□□□□ 0.42
VPS37A-206ENST00000520140 MPHOSPH8Q99549 860 aa17.71■□□□□ 0.42
VPS37A-206ENST00000520140 ALDH1B1P30837 517 aa17.7■□□□□ 0.42
VPS37A-206ENST00000520140 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
VPS37A-206ENST00000520140 POLA2Q14181 598 aa17.7■□□□□ 0.42
VPS37A-206ENST00000520140 LRRC24Q50LG9 513 aa17.7■□□□□ 0.42
VPS37A-206ENST00000520140 STYK1Q6J9G0 422 aa17.7■□□□□ 0.42
VPS37A-206ENST00000520140 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
VPS37A-206ENST00000520140 PIM2Q9P1W9 311 aa17.7■□□□□ 0.42
VPS37A-206ENST00000520140 EXOC6BQ9Y2D4 811 aa17.7■□□□□ 0.42
VPS37A-206ENST00000520140 BRCA1P38398 1863 aaKnown RBP17.7■□□□□ 0.42
VPS37A-206ENST00000520140 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
VPS37A-206ENST00000520140 CRAMP1Q96RY5 1269 aa17.69■□□□□ 0.42
VPS37A-206ENST00000520140 SURF6O75683 361 aaKnown RBP17.69■□□□□ 0.42
VPS37A-206ENST00000520140 AAMPQ13685 434 aa17.69■□□□□ 0.42
VPS37A-206ENST00000520140 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
VPS37A-206ENST00000520140 CNKSR1Q969H4 720 aa17.69■□□□□ 0.42
VPS37A-206ENST00000520140 CNNM1Q9NRU3 951 aa17.69■□□□□ 0.42
VPS37A-206ENST00000520140 PDZRN3Q9UPQ7 1066 aa17.69■□□□□ 0.42
VPS37A-206ENST00000520140 BCS1LQ9Y276 419 aa17.69■□□□□ 0.42
VPS37A-206ENST00000520140 PPEF1O14829 653 aaPredicted RBP17.68■□□□□ 0.42
VPS37A-206ENST00000520140 HMMRO75330 724 aa17.68■□□□□ 0.42
VPS37A-206ENST00000520140 IGHDP01880 384 aa17.68■□□□□ 0.42
VPS37A-206ENST00000520140 C21orf2O43822 256 aa17.67■□□□□ 0.42
VPS37A-206ENST00000520140 OS9Q13438 667 aaPredicted RBP17.67■□□□□ 0.42
VPS37A-206ENST00000520140 HELBQ8NG08 1087 aaPredicted RBP17.67■□□□□ 0.42
VPS37A-206ENST00000520140 DALRD3Q5D0E6 543 aaKnown RBP17.66■□□□□ 0.42
VPS37A-206ENST00000520140 COPRSQ9NQ92 184 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms