RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 ZC3H15Q8WU90 426 aaKnown RBP20.61■□□□□ 0.89
CSGALNACT1-208ENST00000520003 BEGAINQ9BUH8 593 aa20.61■□□□□ 0.89
CSGALNACT1-208ENST00000520003 GLIS2Q9BZE0 524 aaPredicted RBP20.61■□□□□ 0.89
CSGALNACT1-208ENST00000520003 LAMB2P55268 1798 aa20.6■□□□□ 0.89
CSGALNACT1-208ENST00000520003 CELF2O95319 508 aaKnown RBP20.6■□□□□ 0.89
CSGALNACT1-208ENST00000520003 RIPK4P57078 832 aa20.6■□□□□ 0.89
CSGALNACT1-208ENST00000520003 GRM1Q13255 1194 aa20.6■□□□□ 0.89
CSGALNACT1-208ENST00000520003 MPNDQ8N594 471 aa20.6■□□□□ 0.89
CSGALNACT1-208ENST00000520003 DUOX1Q9NRD9 1551 aa20.59■□□□□ 0.89
CSGALNACT1-208ENST00000520003 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
CSGALNACT1-208ENST00000520003 HSP90AB3PQ58FF7 597 aa20.59■□□□□ 0.89
CSGALNACT1-208ENST00000520003 COPS6Q7L5N1 327 aa20.59■□□□□ 0.89
CSGALNACT1-208ENST00000520003 YDJCA8MPS7 323 aa20.58■□□□□ 0.89
CSGALNACT1-208ENST00000520003 TMPOP42166 694 aaKnown RBP20.58■□□□□ 0.89
CSGALNACT1-208ENST00000520003 RGS19P49795 217 aa20.58■□□□□ 0.89
CSGALNACT1-208ENST00000520003 TCIRG1Q13488 830 aa20.58■□□□□ 0.89
CSGALNACT1-208ENST00000520003 GRAPQ13588 217 aa20.58■□□□□ 0.89
CSGALNACT1-208ENST00000520003 TNIP1Q15025 636 aa20.58■□□□□ 0.89
CSGALNACT1-208ENST00000520003 FAM161AQ3B820 660 aa20.58■□□□□ 0.89
CSGALNACT1-208ENST00000520003 GRAPLQ8TC17 118 aaPredicted RBP20.58■□□□□ 0.89
CSGALNACT1-208ENST00000520003 TRPM4Q8TD43 1214 aa20.58■□□□□ 0.89
CSGALNACT1-208ENST00000520003 CA12O43570 354 aa20.57■□□□□ 0.88
CSGALNACT1-208ENST00000520003 RAD17O75943 681 aa20.57■□□□□ 0.88
CSGALNACT1-208ENST00000520003 XAGE3Q8WTP9 111 aa20.57■□□□□ 0.88
CSGALNACT1-208ENST00000520003 SH3TC1Q8TE82 1336 aa20.56■□□□□ 0.88
CSGALNACT1-208ENST00000520003 LRRC37AA6NMS7 1700 aa20.56■□□□□ 0.88
CSGALNACT1-208ENST00000520003 BRPF1P55201 1214 aaPredicted RBP20.56■□□□□ 0.88
CSGALNACT1-208ENST00000520003 DDX46Q7L014 1031 aaKnown RBP20.56■□□□□ 0.88
CSGALNACT1-208ENST00000520003 TMC4Q7Z404 712 aa20.56■□□□□ 0.88
CSGALNACT1-208ENST00000520003 TRMT112Q9UI30 125 aaKnown RBP20.56■□□□□ 0.88
CSGALNACT1-208ENST00000520003 TSKSQ9UJT2 592 aa20.56■□□□□ 0.88
CSGALNACT1-208ENST00000520003 SLC34A2O95436 690 aa20.55■□□□□ 0.88
CSGALNACT1-208ENST00000520003 CDC37L1Q7L3B6 337 aa20.55■□□□□ 0.88
CSGALNACT1-208ENST00000520003 BCL2L13Q9BXK5 485 aa20.55■□□□□ 0.88
CSGALNACT1-208ENST00000520003 CNOT7Q9UIV1 285 aaKnown RBP20.55■□□□□ 0.88
CSGALNACT1-208ENST00000520003 MYBBP1AQ9BQG0 1328 aaKnown RBP20.54■□□□□ 0.88
CSGALNACT1-208ENST00000520003 SHTN1A0MZ66 631 aa20.54■□□□□ 0.88
CSGALNACT1-208ENST00000520003 LMOD3Q0VAK6 560 aa20.54■□□□□ 0.88
CSGALNACT1-208ENST00000520003 AIMP1Q12904 312 aaKnown RBP20.54■□□□□ 0.88
CSGALNACT1-208ENST00000520003 DPF2Q92785 391 aa20.53■□□□□ 0.88
CSGALNACT1-208ENST00000520003 CCDC85CA6NKD9 419 aa20.52■□□□□ 0.88
CSGALNACT1-208ENST00000520003 CHL1O00533 1208 aa20.52■□□□□ 0.88
CSGALNACT1-208ENST00000520003 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.88
CSGALNACT1-208ENST00000520003 MICALL2Q8IY33 904 aa20.52■□□□□ 0.88
CSGALNACT1-208ENST00000520003 NECTIN2Q92692 538 aa20.52■□□□□ 0.88
CSGALNACT1-208ENST00000520003 H7C1D1 291 aa20.51■□□□□ 0.87
CSGALNACT1-208ENST00000520003 SF3B3Q15393 1217 aaKnown RBP20.51■□□□□ 0.87
CSGALNACT1-208ENST00000520003 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
CSGALNACT1-208ENST00000520003 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 TAF1P21675 1872 aa20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 MLLT1Q03111 559 aaPredicted RBP20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 NOGQ13253 232 aa20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 CCDC146Q8IYE0 955 aa20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 ZIC5Q96T25 663 aa20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 ISCA1Q9BUE6 129 aa20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 MCOLN1Q9GZU1 580 aa20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 ZNF408Q9H9D4 720 aa20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 TRIM35Q9UPQ4 493 aa20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 ZBTB12Q9Y330 459 aaPredicted RBP20.5■□□□□ 0.87
CSGALNACT1-208ENST00000520003 COL4A1P02462 1669 aa20.49■□□□□ 0.87
CSGALNACT1-208ENST00000520003 PSMD14O00487 310 aa20.49■□□□□ 0.87
CSGALNACT1-208ENST00000520003 WASHC4Q2M389 1173 aa20.49■□□□□ 0.87
CSGALNACT1-208ENST00000520003 USP48Q86UV5 1035 aa20.49■□□□□ 0.87
CSGALNACT1-208ENST00000520003 PLBD2Q8NHP8 589 aa20.49■□□□□ 0.87
CSGALNACT1-208ENST00000520003 CELF1Q92879 486 aaKnown RBP20.49■□□□□ 0.87
CSGALNACT1-208ENST00000520003 CHPF2Q9P2E5 772 aa20.49■□□□□ 0.87
CSGALNACT1-208ENST00000520003 EGFRP00533 1210 aa20.48■□□□□ 0.87
CSGALNACT1-208ENST00000520003 NEUROD2Q15784 382 aa20.48■□□□□ 0.87
CSGALNACT1-208ENST00000520003 DLK2Q6UY11 383 aa20.48■□□□□ 0.87
CSGALNACT1-208ENST00000520003 SAMD7Q7Z3H4 446 aa20.48■□□□□ 0.87
CSGALNACT1-208ENST00000520003 RUNDC1Q96C34 613 aa20.48■□□□□ 0.87
CSGALNACT1-208ENST00000520003 POLLQ9UGP5 575 aa20.48■□□□□ 0.87
CSGALNACT1-208ENST00000520003 FAM155AB1AL88 458 aaPredicted RBP20.47■□□□□ 0.87
CSGALNACT1-208ENST00000520003 HOXB7P09629 217 aa20.47■□□□□ 0.87
CSGALNACT1-208ENST00000520003 HUNKP57058 714 aa20.47■□□□□ 0.87
CSGALNACT1-208ENST00000520003 NSFL1CQ9UNZ2 370 aaKnown RBP20.47■□□□□ 0.87
CSGALNACT1-208ENST00000520003 RTL9Q8NET4 1388 aa20.46■□□□□ 0.87
CSGALNACT1-208ENST00000520003 RPS12P25398 132 aaKnown RBP20.46■□□□□ 0.87
CSGALNACT1-208ENST00000520003 ANKRD13DQ6ZTN6 518 aa20.46■□□□□ 0.87
CSGALNACT1-208ENST00000520003 FAM89AQ96GI7 184 aa20.46■□□□□ 0.87
CSGALNACT1-208ENST00000520003 DBNDD1Q9H9R9 158 aa20.46■□□□□ 0.87
CSGALNACT1-208ENST00000520003 GPSM2P81274 684 aa20.45■□□□□ 0.86
CSGALNACT1-208ENST00000520003 TRIM28Q13263 835 aaKnown RBP20.45■□□□□ 0.86
CSGALNACT1-208ENST00000520003 TBC1D10BQ4KMP7 808 aaPredicted RBP20.45■□□□□ 0.86
CSGALNACT1-208ENST00000520003 KRT26Q7Z3Y9 468 aa20.45■□□□□ 0.86
CSGALNACT1-208ENST00000520003 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
CSGALNACT1-208ENST00000520003 KCNQ5Q9NR82 932 aa20.45■□□□□ 0.86
CSGALNACT1-208ENST00000520003 ADAMTS8Q9UP79 889 aa20.45■□□□□ 0.86
CSGALNACT1-208ENST00000520003 CASP8AP2Q9UKL3 1982 aa20.45■□□□□ 0.86
CSGALNACT1-208ENST00000520003 ECE2O60344 883 aa20.44■□□□□ 0.86
CSGALNACT1-208ENST00000520003 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
CSGALNACT1-208ENST00000520003 GBA2Q9HCG7 927 aaPredicted RBP20.44■□□□□ 0.86
CSGALNACT1-208ENST00000520003 DBF4Q9UBU7 674 aaPredicted RBP20.44■□□□□ 0.86
CSGALNACT1-208ENST00000520003 ATP5J2-PTCD1G3V325 749 aa20.43■□□□□ 0.86
CSGALNACT1-208ENST00000520003 RIMBP2O15034 1052 aa20.43■□□□□ 0.86
CSGALNACT1-208ENST00000520003 DGKZQ13574 1117 aa20.43■□□□□ 0.86
CSGALNACT1-208ENST00000520003 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
CSGALNACT1-208ENST00000520003 RGMBQ6NW40 437 aa20.43■□□□□ 0.86
CSGALNACT1-208ENST00000520003 ADM5C9JUS6 153 aa20.42■□□□□ 0.86
CSGALNACT1-208ENST00000520003 C6orf229H3BNL8 230 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms