RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 TGFB2P61812 414 aa22.28■■□□□ 1.16
TRAM1-202ENST00000518678 CRY2Q49AN0 593 aa22.28■■□□□ 1.16
TRAM1-202ENST00000518678 COL11A2P13942 1736 aaPredicted RBP22.28■■□□□ 1.16
TRAM1-202ENST00000518678 MYH3P11055 1940 aa22.27■■□□□ 1.16
TRAM1-202ENST00000518678 SF3B3Q15393 1217 aaKnown RBP22.27■■□□□ 1.16
TRAM1-202ENST00000518678 KAZALD1Q96I82 304 aa22.27■■□□□ 1.16
TRAM1-202ENST00000518678 HDAC5Q9UQL6 1122 aa22.27■■□□□ 1.16
TRAM1-202ENST00000518678 CHRNA5P30532 468 aa22.26■■□□□ 1.15
TRAM1-202ENST00000518678 CTSWP56202 376 aa22.26■■□□□ 1.15
TRAM1-202ENST00000518678 FOXO4P98177 505 aa22.26■■□□□ 1.15
TRAM1-202ENST00000518678 C2CD5Q86YS7 1000 aa22.26■■□□□ 1.15
TRAM1-202ENST00000518678 BCS1LQ9Y276 419 aa22.26■■□□□ 1.15
TRAM1-202ENST00000518678 ARFGEF1Q9Y6D6 1849 aa22.26■■□□□ 1.15
TRAM1-202ENST00000518678 DLEC1Q9Y238 1755 aa22.25■■□□□ 1.15
TRAM1-202ENST00000518678 H0YIN7 160 aa22.25■■□□□ 1.15
TRAM1-202ENST00000518678 EPHA10Q5JZY3 1008 aa22.25■■□□□ 1.15
TRAM1-202ENST00000518678 CHMP4BQ9H444 224 aaKnown RBP22.25■■□□□ 1.15
TRAM1-202ENST00000518678 CSF1RP07333 972 aa22.24■■□□□ 1.15
TRAM1-202ENST00000518678 SRGNP10124 158 aa22.24■■□□□ 1.15
TRAM1-202ENST00000518678 TTLL11Q8NHH1 800 aa22.24■■□□□ 1.15
TRAM1-202ENST00000518678 ZNF526Q8TF50 670 aaPredicted RBP22.24■■□□□ 1.15
TRAM1-202ENST00000518678 BICC1Q9H694 974 aaKnown RBP22.24■■□□□ 1.15
TRAM1-202ENST00000518678 GNAI2P04899 355 aa22.23■■□□□ 1.15
TRAM1-202ENST00000518678 NPR1P16066 1061 aa22.23■■□□□ 1.15
TRAM1-202ENST00000518678 CCDC152Q4G0S7 254 aa22.23■■□□□ 1.15
TRAM1-202ENST00000518678 RPGRQ92834 1020 aaKnown RBP22.23■■□□□ 1.15
TRAM1-202ENST00000518678 CRBNQ96SW2 442 aa22.23■■□□□ 1.15
TRAM1-202ENST00000518678 LRRFIP2Q9Y608 721 aaKnown RBP22.23■■□□□ 1.15
TRAM1-202ENST00000518678 HOXA10P31260 410 aaPredicted RBP22.22■■□□□ 1.15
TRAM1-202ENST00000518678 RABL6Q3YEC7 729 aaPredicted RBP22.22■■□□□ 1.15
TRAM1-202ENST00000518678 LMBR1LQ6UX01 489 aa22.22■■□□□ 1.15
TRAM1-202ENST00000518678 ANKRD44Q8N8A2 993 aa22.22■■□□□ 1.15
TRAM1-202ENST00000518678 MASTLQ96GX5 879 aa22.22■■□□□ 1.15
TRAM1-202ENST00000518678 ZBTB40Q9NUA8 1239 aa22.22■■□□□ 1.15
TRAM1-202ENST00000518678 RTL9Q8NET4 1388 aa22.22■■□□□ 1.15
TRAM1-202ENST00000518678 STYK1Q6J9G0 422 aa22.21■■□□□ 1.15
TRAM1-202ENST00000518678 RBM17Q96I25 401 aaKnown RBP22.21■■□□□ 1.15
TRAM1-202ENST00000518678 CCDC85AQ96PX6 553 aaPredicted RBP22.2■■□□□ 1.14
TRAM1-202ENST00000518678 GREM2Q9H772 168 aa22.2■■□□□ 1.14
TRAM1-202ENST00000518678 DDX46Q7L014 1031 aaKnown RBP22.19■■□□□ 1.14
TRAM1-202ENST00000518678 ZNF622Q969S3 477 aaKnown RBP eCLIP22.19■■□□□ 1.14
TRAM1-202ENST00000518678 CRAMP1Q96RY5 1269 aa22.19■■□□□ 1.14
TRAM1-202ENST00000518678 C1QTNF8P60827 252 aa22.18■■□□□ 1.14
TRAM1-202ENST00000518678 FAM161AQ3B820 660 aa22.18■■□□□ 1.14
TRAM1-202ENST00000518678 C1orf115Q9H7X2 142 aa22.18■■□□□ 1.14
TRAM1-202ENST00000518678 ALDH1B1P30837 517 aa22.17■■□□□ 1.14
TRAM1-202ENST00000518678 ARHGAP27Q6ZUM4 889 aa22.17■■□□□ 1.14
TRAM1-202ENST00000518678 CNKSR1Q969H4 720 aa22.17■■□□□ 1.14
TRAM1-202ENST00000518678 SEC31BQ9NQW1 1179 aa22.17■■□□□ 1.14
TRAM1-202ENST00000518678 PIM2Q9P1W9 311 aa22.17■■□□□ 1.14
TRAM1-202ENST00000518678 CHMP3Q9Y3E7 222 aa22.17■■□□□ 1.14
TRAM1-202ENST00000518678 CACNA1SQ13698 1873 aa22.16■■□□□ 1.14
TRAM1-202ENST00000518678 ITGA6P23229 1130 aa22.16■■□□□ 1.14
TRAM1-202ENST00000518678 IRX6P78412 446 aaPredicted RBP22.16■■□□□ 1.14
TRAM1-202ENST00000518678 MTX1Q13505 466 aa22.16■■□□□ 1.14
TRAM1-202ENST00000518678 GRAPQ13588 217 aa22.16■■□□□ 1.14
TRAM1-202ENST00000518678 GRAPLQ8TC17 118 aaPredicted RBP22.16■■□□□ 1.14
TRAM1-202ENST00000518678 SBF1O95248 1867 aa22.15■■□□□ 1.14
TRAM1-202ENST00000518678 TAF1P21675 1872 aa22.15■■□□□ 1.14
TRAM1-202ENST00000518678 COL4A1P02462 1669 aa22.15■■□□□ 1.14
TRAM1-202ENST00000518678 ANKRD18BA2A2Z9 1011 aa22.15■■□□□ 1.14
TRAM1-202ENST00000518678 IFIT5Q13325 482 aaKnown RBP22.15■■□□□ 1.14
TRAM1-202ENST00000518678 CCDC57Q2TAC2 916 aa22.15■■□□□ 1.14
TRAM1-202ENST00000518678 TTLL6Q8N841 843 aa22.15■■□□□ 1.14
TRAM1-202ENST00000518678 EXOC6Q8TAG9 804 aa22.15■■□□□ 1.14
TRAM1-202ENST00000518678 AAMPQ13685 434 aa22.14■■□□□ 1.13
TRAM1-202ENST00000518678 CELF1Q92879 486 aaKnown RBP22.14■■□□□ 1.13
TRAM1-202ENST00000518678 CDC5LQ99459 802 aaKnown RBP22.14■■□□□ 1.13
TRAM1-202ENST00000518678 BBOX1O75936 387 aa22.13■■□□□ 1.13
TRAM1-202ENST00000518678 ATP8B2P98198 1209 aa22.13■■□□□ 1.13
TRAM1-202ENST00000518678 PRPF40BQ6NWY9 871 aaKnown RBP22.13■■□□□ 1.13
TRAM1-202ENST00000518678 CEP85Q6P2H3 762 aa22.13■■□□□ 1.13
TRAM1-202ENST00000518678 SLX4Q8IY92 1834 aa22.13■■□□□ 1.13
TRAM1-202ENST00000518678 RPS8P62241 208 aaKnown RBP22.12■■□□□ 1.13
TRAM1-202ENST00000518678 DALRD3Q5D0E6 543 aaKnown RBP22.12■■□□□ 1.13
TRAM1-202ENST00000518678 ANKRD18AQ8IVF6 992 aa22.12■■□□□ 1.13
TRAM1-202ENST00000518678 SRGAP3O43295 1099 aa22.11■■□□□ 1.13
TRAM1-202ENST00000518678 RFX5P48382 616 aaPredicted RBP22.11■■□□□ 1.13
TRAM1-202ENST00000518678 RPAP2Q8IXW5 612 aaPredicted RBP22.11■■□□□ 1.13
TRAM1-202ENST00000518678 CCDC88AQ3V6T2 1871 aa22.11■■□□□ 1.13
TRAM1-202ENST00000518678 PNMA6EA0A0J9YXQ4 647 aa22.1■■□□□ 1.13
TRAM1-202ENST00000518678 PPEF1O14829 653 aaPredicted RBP22.1■■□□□ 1.13
TRAM1-202ENST00000518678 TMC4Q7Z404 712 aa22.1■■□□□ 1.13
TRAM1-202ENST00000518678 GPBP1L1Q9HC44 474 aaPredicted RBP22.1■■□□□ 1.13
TRAM1-202ENST00000518678 SPEF2Q9C093 1822 aa22.1■■□□□ 1.13
TRAM1-202ENST00000518678 IGHMBP2P38935 993 aaKnown RBP22.09■■□□□ 1.13
TRAM1-202ENST00000518678 PRELPP51888 382 aa22.09■■□□□ 1.13
TRAM1-202ENST00000518678 RASSF7Q02833 373 aa22.09■■□□□ 1.13
TRAM1-202ENST00000518678 POLA2Q14181 598 aa22.09■■□□□ 1.13
TRAM1-202ENST00000518678 TAF7LQ5H9L4 462 aa22.09■■□□□ 1.13
TRAM1-202ENST00000518678 SSH3Q8TE77 659 aa22.09■■□□□ 1.13
TRAM1-202ENST00000518678 ZNF594Q96JF6 807 aaPredicted RBP22.09■■□□□ 1.13
TRAM1-202ENST00000518678 PTPN12Q05209 780 aaKnown RBP22.08■■□□□ 1.13
TRAM1-202ENST00000518678 C9orf131Q5VYM1 1079 aa22.08■■□□□ 1.13
TRAM1-202ENST00000518678 C7orf43Q8WVR3 580 aa22.08■■□□□ 1.13
TRAM1-202ENST00000518678 BSDC1Q9NW68 430 aaPredicted RBP22.08■■□□□ 1.13
TRAM1-202ENST00000518678 LRRC37AA6NMS7 1700 aa22.08■■□□□ 1.12
TRAM1-202ENST00000518678 CEP350Q5VT06 3117 aa22.08■■□□□ 1.12
TRAM1-202ENST00000518678 SIRT2Q8IXJ6 389 aa22.07■■□□□ 1.12
TRAM1-202ENST00000518678 SP8Q8IXZ3 490 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms