RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
NPM1-205ENST00000518587 ZNF330Q9Y3S2 320 aaPredicted RBP8.85□□□□□ -0.99
NPM1-205ENST00000518587 RGPD3A6NKT7 1758 aaPredicted RBP8.85□□□□□ -0.99
NPM1-205ENST00000518587 RGPD4Q7Z3J3 1758 aa8.85□□□□□ -0.99
NPM1-205ENST00000518587 BCL9O00512 1426 aa8.85□□□□□ -0.99
NPM1-205ENST00000518587 ROCK2O75116 1388 aaKnown RBP8.85□□□□□ -0.99
NPM1-205ENST00000518587 HMGB2P26583 209 aaKnown RBP8.84□□□□□ -0.99
NPM1-205ENST00000518587 EIF4G2P78344 907 aaKnown RBP eCLIP8.84□□□□□ -0.992e-6■□□□□ 8.2
NPM1-205ENST00000518587 NR5A1Q13285 461 aa8.84□□□□□ -0.99
NPM1-205ENST00000518587 PKDCCQ504Y2 493 aa8.84□□□□□ -0.99
NPM1-205ENST00000518587 PUS7Q96PZ0 661 aaKnown RBP8.84□□□□□ -0.99
NPM1-205ENST00000518587 CAMTA1Q9Y6Y1 1673 aa8.84□□□□□ -0.99
NPM1-205ENST00000518587 APBA3O96018 575 aa8.83□□□□□ -1
NPM1-205ENST00000518587 NR3C2P08235 984 aa8.83□□□□□ -1
NPM1-205ENST00000518587 FSHRP23945 695 aa8.83□□□□□ -1
NPM1-205ENST00000518587 MCCD1P59942 119 aaPredicted RBP8.83□□□□□ -1
NPM1-205ENST00000518587 NNTQ13423 1086 aa8.83□□□□□ -1
NPM1-205ENST00000518587 CHRNA2Q15822 529 aa8.83□□□□□ -1
NPM1-205ENST00000518587 NBPF1Q3BBV0 1214 aa8.83□□□□□ -1
NPM1-205ENST00000518587 CAMKK2Q96RR4 588 aa8.83□□□□□ -1
NPM1-205ENST00000518587 CCDC7Q96M83 1385 aa8.83□□□□□ -1
NPM1-205ENST00000518587 NINLQ9Y2I6 1382 aa8.83□□□□□ -1
NPM1-205ENST00000518587 WDR17Q8IZU2 1322 aa8.82□□□□□ -1
NPM1-205ENST00000518587 POM121CA8CG34 1229 aa8.82□□□□□ -1
NPM1-205ENST00000518587 ESPNB1AK53 854 aa8.82□□□□□ -1
NPM1-205ENST00000518587 PLSCR1O15162 318 aa8.82□□□□□ -1
NPM1-205ENST00000518587 GIGYF1O75420 1035 aaPredicted RBP8.82□□□□□ -1
NPM1-205ENST00000518587 TRIM37O94972 964 aa8.82□□□□□ -1
NPM1-205ENST00000518587 AVPP01185 164 aa8.82□□□□□ -1
NPM1-205ENST00000518587 DDB1Q16531 1140 aa8.82□□□□□ -1
NPM1-205ENST00000518587 NBPF20Q3BBV1 942 aa8.82□□□□□ -1
NPM1-205ENST00000518587 INTS6LQ5JSJ4 861 aaKnown RBP8.82□□□□□ -1
NPM1-205ENST00000518587 LARP1Q6PKG0 1096 aaKnown RBP8.82□□□□□ -1
NPM1-205ENST00000518587 L3MBTL2Q969R5 705 aa8.82□□□□□ -1
NPM1-205ENST00000518587 ZMYND15Q9H091 742 aa8.82□□□□□ -1
NPM1-205ENST00000518587 CABP1Q9NZU7 370 aa8.82□□□□□ -1
NPM1-205ENST00000518587 CEP126Q9P2H0 1117 aa8.82□□□□□ -1
NPM1-205ENST00000518587 RREB1Q92766 1687 aa8.81□□□□□ -1
NPM1-205ENST00000518587 CPSF1Q10570 1443 aaKnown RBP8.81□□□□□ -1
NPM1-205ENST00000518587 NUTM2GQ5VZR2 741 aa8.81□□□□□ -1
NPM1-205ENST00000518587 TOM1L2Q6ZVM7 507 aa8.81□□□□□ -1
NPM1-205ENST00000518587 USP35Q9P2H5 1018 aa8.81□□□□□ -1
NPM1-205ENST00000518587 HDGFL2Q7Z4V5 671 aaPredicted RBP8.8□□□□□ -1
NPM1-205ENST00000518587 ZNF592Q92610 1267 aa8.8□□□□□ -1
NPM1-205ENST00000518587 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
NPM1-205ENST00000518587 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
NPM1-205ENST00000518587 ALG2Q9H553 416 aa8.8□□□□□ -1
NPM1-205ENST00000518587 AKAP12Q02952 1782 aa8.8□□□□□ -1
NPM1-205ENST00000518587 TTC21BQ7Z4L5 1316 aa8.8□□□□□ -1
NPM1-205ENST00000518587 USP54Q70EL1 1684 aa8.79□□□□□ -1
NPM1-205ENST00000518587 USP31Q70CQ4 1352 aa8.79□□□□□ -1
NPM1-205ENST00000518587 KTN1Q86UP2 1357 aaKnown RBP8.79□□□□□ -1
NPM1-205ENST00000518587 TRAK2O60296 914 aa8.79□□□□□ -1
NPM1-205ENST00000518587 SOX11P35716 441 aa8.79□□□□□ -1
NPM1-205ENST00000518587 SEMA3FQ13275 785 aa8.79□□□□□ -1
NPM1-205ENST00000518587 R3HDM1Q15032 1099 aaKnown RBP8.79□□□□□ -1
NPM1-205ENST00000518587 EZH2Q15910 746 aaKnown RBP8.79□□□□□ -1
NPM1-205ENST00000518587 Q6ZNB5 142 aa8.79□□□□□ -1
NPM1-205ENST00000518587 ARHGEF25Q86VW2 580 aa8.79□□□□□ -1
NPM1-205ENST00000518587 CCDC116Q8IYX3 515 aa8.79□□□□□ -1
NPM1-205ENST00000518587 ADAMTS19Q8TE59 1207 aa8.79□□□□□ -1
NPM1-205ENST00000518587 SPON1Q9HCB6 807 aa8.79□□□□□ -1
NPM1-205ENST00000518587 TERF2IPQ9NYB0 399 aa8.79□□□□□ -1
NPM1-205ENST00000518587 PIK3C2AO00443 1686 aa8.78□□□□□ -1
NPM1-205ENST00000518587 WNK3Q9BYP7 1800 aa8.78□□□□□ -1
NPM1-205ENST00000518587 TONSLQ96HA7 1378 aa8.78□□□□□ -1
NPM1-205ENST00000518587 LCE2BO14633 110 aa8.78□□□□□ -1
NPM1-205ENST00000518587 CSB-PGBD3P0DP91 1061 aa8.78□□□□□ -1
NPM1-205ENST00000518587 RAB15P59190 212 aa8.78□□□□□ -1
NPM1-205ENST00000518587 PPP1R26Q5T8A7 1209 aaPredicted RBP8.78□□□□□ -1
NPM1-205ENST00000518587 NUP188Q5SRE5 1749 aa8.77□□□□□ -1
NPM1-205ENST00000518587 MON2Q7Z3U7 1717 aa8.77□□□□□ -1
NPM1-205ENST00000518587 LRRC37A3O60309 1634 aa8.77□□□□□ -1.01
NPM1-205ENST00000518587 ERVH48-1M5A8F1 160 aa8.77□□□□□ -1.01
NPM1-205ENST00000518587 EXOC5O00471 708 aa8.77□□□□□ -1.01
NPM1-205ENST00000518587 SMCPP49901 116 aaPredicted RBP8.77□□□□□ -1.01
NPM1-205ENST00000518587 WDR4P57081 412 aaKnown RBP8.77□□□□□ -1.01
NPM1-205ENST00000518587 DHX9Q08211 1270 aaKnown RBP8.77□□□□□ -1.01
NPM1-205ENST00000518587 PHTF2Q8N3S3 785 aa8.77□□□□□ -1.01
NPM1-205ENST00000518587 CARD11Q9BXL7 1154 aa8.77□□□□□ -1.01
NPM1-205ENST00000518587 EDC4Q6P2E9 1401 aaKnown RBP8.77□□□□□ -1.01
NPM1-205ENST00000518587 PEAK1Q9H792 1746 aa8.77□□□□□ -1.01
NPM1-205ENST00000518587 COL18A1P39060 1754 aa8.76□□□□□ -1.01
NPM1-205ENST00000518587 FAM208AQ9UK61 1670 aaKnown RBP8.76□□□□□ -1.01
NPM1-205ENST00000518587 TIMP2P16035 220 aa8.76□□□□□ -1.01
NPM1-205ENST00000518587 HDGFL1Q5TGJ6 251 aa8.76□□□□□ -1.01
NPM1-205ENST00000518587 CRIPAKQ8N1N5 446 aa8.76□□□□□ -1.01
NPM1-205ENST00000518587 ITPKCQ96DU7 683 aa8.76□□□□□ -1.01
NPM1-205ENST00000518587 AAASQ9NRG9 546 aa8.76□□□□□ -1.01
NPM1-205ENST00000518587 PPP1R1BQ9UD71 204 aaPredicted RBP8.76□□□□□ -1.01
NPM1-205ENST00000518587 TNS2Q63HR2 1409 aa8.76□□□□□ -1.01
NPM1-205ENST00000518587 NFAT5O94916 1531 aa8.75□□□□□ -1.01
NPM1-205ENST00000518587 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
NPM1-205ENST00000518587 ST8SIA5O15466 376 aa8.75□□□□□ -1.01
NPM1-205ENST00000518587 KCNQ2O43526 872 aa8.75□□□□□ -1.01
NPM1-205ENST00000518587 ZIC2O95409 532 aaPredicted RBP8.75□□□□□ -1.01
NPM1-205ENST00000518587 CTC1Q2NKJ3 1217 aa8.75□□□□□ -1.01
NPM1-205ENST00000518587 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
NPM1-205ENST00000518587 FAM182BQ5T319 152 aa8.75□□□□□ -1.01
NPM1-205ENST00000518587 RNF20Q5VTR2 975 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms