RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 NUTM2FA1L443 756 aa5.43□□□□□ -1.54
CPNE3-204ENST00000517862 MAP3K12Q12852 859 aa5.43□□□□□ -1.54
CPNE3-204ENST00000517862 ZNF827Q17R98 1081 aa5.43□□□□□ -1.54
CPNE3-204ENST00000517862 ATP1B4Q9UN42 357 aaPredicted RBP5.43□□□□□ -1.54
CPNE3-204ENST00000517862 LRPPRCP42704 1394 aaKnown RBP5.42□□□□□ -1.54
CPNE3-204ENST00000517862 SPTBN5Q9NRC6 3674 aaKnown RBP5.42□□□□□ -1.54
CPNE3-204ENST00000517862 OVOS2A0A0G2JMS6 1433 aa5.42□□□□□ -1.54
CPNE3-204ENST00000517862 OVOS2A0A0J9YW53 1432 aa5.42□□□□□ -1.54
CPNE3-204ENST00000517862 TECPR2O15040 1411 aa5.42□□□□□ -1.54
CPNE3-204ENST00000517862 OVOS2Q6IE36 1432 aa5.42□□□□□ -1.54
CPNE3-204ENST00000517862 ZIC2O95409 532 aaPredicted RBP5.42□□□□□ -1.54
CPNE3-204ENST00000517862 DOC2BQ14184 412 aa5.42□□□□□ -1.54
CPNE3-204ENST00000517862 DEFB115Q30KQ5 88 aa5.42□□□□□ -1.54
CPNE3-204ENST00000517862 Q3C1V9 767 aa5.42□□□□□ -1.54
CPNE3-204ENST00000517862 P2RX7Q99572 595 aaKnown RBP5.42□□□□□ -1.54
CPNE3-204ENST00000517862 CACNA1BQ00975 2339 aa5.42□□□□□ -1.54
CPNE3-204ENST00000517862 LTBP1Q14766 1721 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 QSER1Q2KHR3 1735 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 XRN1Q8IZH2 1706 aaKnown RBP5.41□□□□□ -1.54
CPNE3-204ENST00000517862 FMN2Q9NZ56 1722 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 TMEM88BA6NKF7 163 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 C1QTNF9BB2RNN3 333 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 TRIM26Q12899 539 aaPredicted RBP5.41□□□□□ -1.54
CPNE3-204ENST00000517862 KRT28Q7Z3Y7 464 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 PARP9Q8IXQ6 854 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 RDH13Q8NBN7 331 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 MKL2Q9ULH7 1088 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 DUOX2Q9NRD8 1548 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 PAPPAQ13219 1627 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 PHRF1Q9P1Y6 1649 aaKnown RBP5.41□□□□□ -1.54
CPNE3-204ENST00000517862 NRXN3Q9Y4C0 1643 aa5.41□□□□□ -1.54
CPNE3-204ENST00000517862 ZFYVE9O95405 1425 aa5.4□□□□□ -1.54
CPNE3-204ENST00000517862 PEAK1Q9H792 1746 aa5.4□□□□□ -1.54
CPNE3-204ENST00000517862 RANGAP1P46060 587 aaPredicted RBP5.4□□□□□ -1.54
CPNE3-204ENST00000517862 MAP2K5Q13163 448 aa5.4□□□□□ -1.54
CPNE3-204ENST00000517862 KLF16Q9BXK1 252 aaPredicted RBP5.4□□□□□ -1.54
CPNE3-204ENST00000517862 PNPLA7Q6ZV29 1317 aa5.4□□□□□ -1.55
CPNE3-204ENST00000517862 MTUS2Q5JR59 1369 aa5.4□□□□□ -1.55
CPNE3-204ENST00000517862 KIAA1107Q9UPP5 1409 aa5.4□□□□□ -1.55
CPNE3-204ENST00000517862 RIMS2Q9UQ26 1411 aa5.4□□□□□ -1.55
CPNE3-204ENST00000517862 MYO5BQ9ULV0 1848 aa5.39□□□□□ -1.55
CPNE3-204ENST00000517862 RASSF10A6NK89 507 aa5.39□□□□□ -1.55
CPNE3-204ENST00000517862 TTLL8A6PVC2 850 aa5.39□□□□□ -1.55
CPNE3-204ENST00000517862 KCTD2Q14681 263 aa5.39□□□□□ -1.55
CPNE3-204ENST00000517862 GRIPAP1Q4V328 841 aa5.39□□□□□ -1.55
CPNE3-204ENST00000517862 MSL1Q68DK7 614 aa5.39□□□□□ -1.55
CPNE3-204ENST00000517862 ZFAND3Q9H8U3 227 aa5.39□□□□□ -1.55
CPNE3-204ENST00000517862 STRN4Q9NRL3 753 aa5.39□□□□□ -1.55
CPNE3-204ENST00000517862 IRF6O14896 467 aa5.38□□□□□ -1.55
CPNE3-204ENST00000517862 CA12O43570 354 aa5.38□□□□□ -1.55
CPNE3-204ENST00000517862 COL8A1P27658 744 aa5.38□□□□□ -1.55
CPNE3-204ENST00000517862 GRM1Q13255 1194 aa5.38□□□□□ -1.55
CPNE3-204ENST00000517862 TTLL12Q14166 644 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-204ENST00000517862 RNF181Q9P0P0 153 aa5.38□□□□□ -1.55
CPNE3-204ENST00000517862 BCS1LQ9Y276 419 aa5.38□□□□□ -1.55
CPNE3-204ENST00000517862 STXBP5LQ9Y2K9 1186 aa5.38□□□□□ -1.55
CPNE3-204ENST00000517862 MINK1Q8N4C8 1332 aaPredicted RBP5.38□□□□□ -1.55
CPNE3-204ENST00000517862 TUBGCP6Q96RT7 1819 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 SLC35F4A4IF30 521 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 APBB1O00213 710 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 LRP8Q14114 963 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 GRIN2CQ14957 1233 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 AMHR2Q16671 573 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 DDRGK1Q96HY6 314 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 GPR101Q96P66 508 aaPredicted RBP5.37□□□□□ -1.55
CPNE3-204ENST00000517862 USB1Q9BQ65 265 aaKnown RBP5.37□□□□□ -1.55
CPNE3-204ENST00000517862 LRRC4BQ9NT99 713 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 TFCP2L1Q9NZI6 479 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 LAMA2P24043 3122 aaKnown RBP5.37□□□□□ -1.55
CPNE3-204ENST00000517862 RANBP2P49792 3224 aaKnown RBP5.37□□□□□ -1.55
CPNE3-204ENST00000517862 HFM1A2PYH4 1435 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 THSD7BQ9C0I4 1608 aa5.37□□□□□ -1.55
CPNE3-204ENST00000517862 GNPATO15228 680 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 FCHSD2O94868 740 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 SH3BP2P78314 561 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 CD163Q86VB7 1156 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 MEIOBQ8N635 442 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.36□□□□□ -1.55
CPNE3-204ENST00000517862 CLUAP1Q96AJ1 413 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 ITPKCQ96DU7 683 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 FMNL2Q96PY5 1086 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 MBIPQ9NS73 344 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 ARHGAP31Q2M1Z3 1444 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 TNS3Q68CZ2 1445 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 ATRXP46100 2492 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 TRANK1O15050 2925 aa5.36□□□□□ -1.55
CPNE3-204ENST00000517862 PARP4Q9UKK3 1724 aaKnown RBP5.35□□□□□ -1.55
CPNE3-204ENST00000517862 LRRC37A3O60309 1634 aa5.35□□□□□ -1.55
CPNE3-204ENST00000517862 ATP7BP35670 1465 aa5.35□□□□□ -1.55
CPNE3-204ENST00000517862 CCDC144AA2RUR9 1427 aa5.35□□□□□ -1.55
CPNE3-204ENST00000517862 PASKQ96RG2 1323 aa5.35□□□□□ -1.55
CPNE3-204ENST00000517862 MS4A1P11836 297 aa5.35□□□□□ -1.55
CPNE3-204ENST00000517862 PTGDRQ13258 359 aa5.35□□□□□ -1.55
CPNE3-204ENST00000517862 MUC3AQ02505 3323 aa5.35□□□□□ -1.55
CPNE3-204ENST00000517862 SSH2Q76I76 1423 aa5.34□□□□□ -1.55
CPNE3-204ENST00000517862 BRD4O60885 1362 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-204ENST00000517862 FIGNL2A6NMB9 653 aa5.34□□□□□ -1.55
CPNE3-204ENST00000517862 VARSP26640 1264 aaKnown RBP5.34□□□□□ -1.55
CPNE3-204ENST00000517862 ECE1P42892 770 aa5.34□□□□□ -1.55
CPNE3-204ENST00000517862 SNRPNP63162 240 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms