RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ZNF408Q9H9D4 720 aa15.17■□□□□ 0.02
TRAPPC9-203ENST00000517667 ABCC4O15439 1325 aa15.17■□□□□ 0.02
TRAPPC9-203ENST00000517667 BBOX1O75936 387 aa15.16■□□□□ 0.02
TRAPPC9-203ENST00000517667 PPP2R1AP30153 589 aa15.16■□□□□ 0.02
TRAPPC9-203ENST00000517667 KIAA2012Q0VF49 1180 aa15.16■□□□□ 0.02
TRAPPC9-203ENST00000517667 SLC10A5Q5PT55 438 aa15.16■□□□□ 0.02
TRAPPC9-203ENST00000517667 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
TRAPPC9-203ENST00000517667 SLC51AQ86UW1 340 aa15.16■□□□□ 0.02
TRAPPC9-203ENST00000517667 SP8Q8IXZ3 490 aa15.16■□□□□ 0.02
TRAPPC9-203ENST00000517667 UTP14AQ9BVJ6 771 aaKnown RBP15.16■□□□□ 0.02
TRAPPC9-203ENST00000517667 LRRC37AA6NMS7 1700 aa15.15■□□□□ 0.02
TRAPPC9-203ENST00000517667 MPNDQ8N594 471 aa15.15■□□□□ 0.02
TRAPPC9-203ENST00000517667 PDE4DIPQ5VU43 2346 aa15.15■□□□□ 0.02
TRAPPC9-203ENST00000517667 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
TRAPPC9-203ENST00000517667 H7C1D1 291 aa15.14■□□□□ 0.01
TRAPPC9-203ENST00000517667 RAD17O75943 681 aa15.13■□□□□ 0.01
TRAPPC9-203ENST00000517667 HIRAP54198 1017 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC9-203ENST00000517667 HUNKP57058 714 aa15.13■□□□□ 0.01
TRAPPC9-203ENST00000517667 TMC4Q7Z404 712 aa15.13■□□□□ 0.01
TRAPPC9-203ENST00000517667 SAGE1Q9NXZ1 904 aa15.13■□□□□ 0.01
TRAPPC9-203ENST00000517667 CNOT7Q9UIV1 285 aaKnown RBP15.13■□□□□ 0.01
TRAPPC9-203ENST00000517667 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
TRAPPC9-203ENST00000517667 DUOX1Q9NRD9 1551 aa15.12■□□□□ 0.01
TRAPPC9-203ENST00000517667 HSP90AB3PQ58FF7 597 aa15.12■□□□□ 0.01
TRAPPC9-203ENST00000517667 DDX46Q7L014 1031 aaKnown RBP15.12■□□□□ 0.01
TRAPPC9-203ENST00000517667 TRPM4Q8TD43 1214 aa15.12■□□□□ 0.01
TRAPPC9-203ENST00000517667 MICALL2Q8IY33 904 aa15.11■□□□□ 0.01
TRAPPC9-203ENST00000517667 DPF2Q92785 391 aa15.11■□□□□ 0.01
TRAPPC9-203ENST00000517667 GRAPQ13588 217 aa15.1■□□□□ 0.01
TRAPPC9-203ENST00000517667 NFE2L2Q16236 605 aa15.1■□□□□ 0.01
TRAPPC9-203ENST00000517667 RGMBQ6NW40 437 aa15.1■□□□□ 0.01
TRAPPC9-203ENST00000517667 USP48Q86UV5 1035 aa15.1■□□□□ 0.01
TRAPPC9-203ENST00000517667 GRAPLQ8TC17 118 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC9-203ENST00000517667 CCDC102AQ96A19 550 aa15.1■□□□□ 0.01
TRAPPC9-203ENST00000517667 TAF1P21675 1872 aa15.1■□□□□ 0.01
TRAPPC9-203ENST00000517667 YDJCA8MPS7 323 aa15.09■□□□□ 0.01
TRAPPC9-203ENST00000517667 KRT26Q7Z3Y9 468 aa15.09■□□□□ 0.01
TRAPPC9-203ENST00000517667 LRP10Q7Z4F1 713 aa15.09■□□□□ 0.01
TRAPPC9-203ENST00000517667 C2orf69Q8N8R5 385 aa15.09■□□□□ 0.01
TRAPPC9-203ENST00000517667 PNNQ9H307 717 aaKnown RBP15.09■□□□□ 0.01
TRAPPC9-203ENST00000517667 GBA2Q9HCG7 927 aaPredicted RBP15.09■□□□□ 0.01
TRAPPC9-203ENST00000517667 SH3TC1Q8TE82 1336 aa15.09■□□□□ 0.01
TRAPPC9-203ENST00000517667 POLR2AP24928 1970 aaKnown RBP15.08■□□□□ 0
TRAPPC9-203ENST00000517667 FAM155AB1AL88 458 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-203ENST00000517667 RPS12P25398 132 aaKnown RBP15.08■□□□□ 0
TRAPPC9-203ENST00000517667 PDIA6Q15084 440 aa15.08■□□□□ 0
TRAPPC9-203ENST00000517667 NLRP10Q86W26 655 aa15.08■□□□□ 0
TRAPPC9-203ENST00000517667 PLEKHF1Q96S99 279 aa15.08■□□□□ 0
TRAPPC9-203ENST00000517667 ZIC5Q96T25 663 aa15.08■□□□□ 0
TRAPPC9-203ENST00000517667 TRMT112Q9UI30 125 aaKnown RBP15.08■□□□□ 0
TRAPPC9-203ENST00000517667 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
TRAPPC9-203ENST00000517667 MAPK8IP3Q9UPT6 1336 aa15.08■□□□□ 0
TRAPPC9-203ENST00000517667 HCLS1P14317 486 aaPredicted RBP15.07■□□□□ 0
TRAPPC9-203ENST00000517667 WASHC4Q2M389 1173 aa15.07■□□□□ 0
TRAPPC9-203ENST00000517667 DCPSQ96C86 337 aaKnown RBP15.07■□□□□ 0
TRAPPC9-203ENST00000517667 THUMPD2Q9BTF0 503 aaKnown RBP15.07■□□□□ 0
TRAPPC9-203ENST00000517667 SHTN1A0MZ66 631 aa15.06■□□□□ 0
TRAPPC9-203ENST00000517667 PSMD14O00487 310 aa15.06■□□□□ 0
TRAPPC9-203ENST00000517667 EIF2S2P20042 333 aaKnown RBP15.06■□□□□ 0
TRAPPC9-203ENST00000517667 ZNF157P51786 506 aaPredicted RBP15.06■□□□□ 0
TRAPPC9-203ENST00000517667 SAMD7Q7Z3H4 446 aa15.06■□□□□ 0
TRAPPC9-203ENST00000517667 REM2Q8IYK8 340 aaPredicted RBP15.06■□□□□ 0
TRAPPC9-203ENST00000517667 BABAM1Q9NWV8 329 aa15.06■□□□□ 0
TRAPPC9-203ENST00000517667 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
TRAPPC9-203ENST00000517667 KIF23Q02241 960 aaPredicted RBP15.05■□□□□ -0
TRAPPC9-203ENST00000517667 TBC1D10BQ4KMP7 808 aaPredicted RBP15.05■□□□□ -0
TRAPPC9-203ENST00000517667 RNF186Q9NXI6 227 aa15.05■□□□□ -0
TRAPPC9-203ENST00000517667 TRPA1O75762 1119 aa15.04■□□□□ -0
TRAPPC9-203ENST00000517667 SOX10P56693 466 aa15.04■□□□□ -0
TRAPPC9-203ENST00000517667 TCIRG1Q13488 830 aa15.04■□□□□ -0
TRAPPC9-203ENST00000517667 PROSER3Q2NL68 480 aa15.04■□□□□ -0
TRAPPC9-203ENST00000517667 COPS6Q7L5N1 327 aa15.04■□□□□ -0
TRAPPC9-203ENST00000517667 EYA3Q99504 573 aa15.04■□□□□ -0
TRAPPC9-203ENST00000517667 DBNDD1Q9H9R9 158 aa15.04■□□□□ -0
TRAPPC9-203ENST00000517667 NSFL1CQ9UNZ2 370 aaKnown RBP15.04■□□□□ -0
TRAPPC9-203ENST00000517667 ADM5C9JUS6 153 aa15.03■□□□□ -0
TRAPPC9-203ENST00000517667 ANXA1P04083 346 aa15.03■□□□□ -0
TRAPPC9-203ENST00000517667 SLC10A3P09131 477 aa15.03■□□□□ -0
TRAPPC9-203ENST00000517667 PRPF38BQ5VTL8 546 aaKnown RBP15.03■□□□□ -0
TRAPPC9-203ENST00000517667 CTU1Q7Z7A3 348 aaKnown RBP15.03■□□□□ -0
TRAPPC9-203ENST00000517667 SULF1Q8IWU6 871 aa15.03■□□□□ -0
TRAPPC9-203ENST00000517667 XAGE3Q8WTP9 111 aa15.03■□□□□ -0
TRAPPC9-203ENST00000517667 PSME4Q14997 1843 aa15.02■□□□□ -0
TRAPPC9-203ENST00000517667 C6orf229H3BNL8 230 aa15.02■□□□□ -0
TRAPPC9-203ENST00000517667 ECE2O60344 883 aa15.02■□□□□ -0
TRAPPC9-203ENST00000517667 EGFRP00533 1210 aa15.02■□□□□ -0
TRAPPC9-203ENST00000517667 AIMP1Q12904 312 aaKnown RBP15.02■□□□□ -0
TRAPPC9-203ENST00000517667 KIF4BQ2VIQ3 1234 aa15.02■□□□□ -0
TRAPPC9-203ENST00000517667 DLK2Q6UY11 383 aa15.02■□□□□ -0
TRAPPC9-203ENST00000517667 PAPPA2Q9BXP8 1791 aa15.02□□□□□ -0.01
TRAPPC9-203ENST00000517667 RTL9Q8NET4 1388 aa15.01□□□□□ -0.01
TRAPPC9-203ENST00000517667 RIMBP2O15034 1052 aa15.01□□□□□ -0.01
TRAPPC9-203ENST00000517667 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
TRAPPC9-203ENST00000517667 ZNF609O15014 1411 aa15□□□□□ -0.01
TRAPPC9-203ENST00000517667 SCN9AQ15858 1988 aa15□□□□□ -0.01
TRAPPC9-203ENST00000517667 FKBP1BP68106 108 aa15□□□□□ -0.01
TRAPPC9-203ENST00000517667 SF3B3Q15393 1217 aaKnown RBP15□□□□□ -0.01
TRAPPC9-203ENST00000517667 PKN2Q16513 984 aaKnown RBP15□□□□□ -0.01
TRAPPC9-203ENST00000517667 RBM26Q5T8P6 1007 aaKnown RBP15□□□□□ -0.01
TRAPPC9-203ENST00000517667 CELF1Q92879 486 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms