RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 UBTFL1P0CB47 393 aaPredicted RBP12.44□□□□□ -0.42
CLN8-202ENST00000517514 CHRNA5P30532 468 aa12.44□□□□□ -0.42
CLN8-202ENST00000517514 CTSWP56202 376 aa12.44□□□□□ -0.42
CLN8-202ENST00000517514 SLC51AQ86UW1 340 aa12.44□□□□□ -0.42
CLN8-202ENST00000517514 NLGN2Q8NFZ4 835 aa12.44□□□□□ -0.42
CLN8-202ENST00000517514 SRGNP10124 158 aa12.43□□□□□ -0.42
CLN8-202ENST00000517514 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
CLN8-202ENST00000517514 LMBR1LQ6UX01 489 aa12.43□□□□□ -0.42
CLN8-202ENST00000517514 SIRT2Q8IXJ6 389 aa12.43□□□□□ -0.42
CLN8-202ENST00000517514 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
CLN8-202ENST00000517514 FHDC1Q9C0D6 1143 aaPredicted RBP12.43□□□□□ -0.42
CLN8-202ENST00000517514 CD2APQ9Y5K6 639 aa12.43□□□□□ -0.42
CLN8-202ENST00000517514 RTL9Q8NET4 1388 aa12.43□□□□□ -0.42
CLN8-202ENST00000517514 LRRC37AA6NMS7 1700 aa12.42□□□□□ -0.42
CLN8-202ENST00000517514 A0A0G2JLW4 131 aa12.42□□□□□ -0.42
CLN8-202ENST00000517514 GNAI2P04899 355 aa12.42□□□□□ -0.42
CLN8-202ENST00000517514 DPEP1P16444 411 aa12.42□□□□□ -0.42
CLN8-202ENST00000517514 HOXA10P31260 410 aaPredicted RBP12.42□□□□□ -0.42
CLN8-202ENST00000517514 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
CLN8-202ENST00000517514 C2CD5Q86YS7 1000 aa12.42□□□□□ -0.42
CLN8-202ENST00000517514 NLRP3Q96P20 1036 aa12.42□□□□□ -0.42
CLN8-202ENST00000517514 GREM2Q9H772 168 aa12.42□□□□□ -0.42
CLN8-202ENST00000517514 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
CLN8-202ENST00000517514 PCDHB15Q9Y5E8 787 aa12.42□□□□□ -0.42
CLN8-202ENST00000517514 PNMA6EA0A0J9YXQ4 647 aa12.41□□□□□ -0.42
CLN8-202ENST00000517514 NPHP1O15259 732 aa12.41□□□□□ -0.42
CLN8-202ENST00000517514 PDE6BP35913 854 aa12.41□□□□□ -0.42
CLN8-202ENST00000517514 MTX1Q13505 466 aa12.41□□□□□ -0.42
CLN8-202ENST00000517514 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
CLN8-202ENST00000517514 ARFGEF1Q9Y6D6 1849 aa12.4□□□□□ -0.42
CLN8-202ENST00000517514 TGFB2P61812 414 aa12.4□□□□□ -0.42
CLN8-202ENST00000517514 CEP85Q6P2H3 762 aa12.4□□□□□ -0.42
CLN8-202ENST00000517514 CELF1Q92879 486 aaKnown RBP12.4□□□□□ -0.42
CLN8-202ENST00000517514 SYT17Q9BSW7 474 aa12.4□□□□□ -0.42
CLN8-202ENST00000517514 LTBP1Q14766 1721 aa12.4□□□□□ -0.43
CLN8-202ENST00000517514 ATP8B2P98198 1209 aa12.39□□□□□ -0.43
CLN8-202ENST00000517514 POLA2Q14181 598 aa12.39□□□□□ -0.43
CLN8-202ENST00000517514 STYK1Q6J9G0 422 aa12.39□□□□□ -0.43
CLN8-202ENST00000517514 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
CLN8-202ENST00000517514 MASTLQ96GX5 879 aa12.39□□□□□ -0.43
CLN8-202ENST00000517514 ZNF594Q96JF6 807 aaPredicted RBP12.39□□□□□ -0.43
CLN8-202ENST00000517514 CRAMP1Q96RY5 1269 aa12.39□□□□□ -0.43
CLN8-202ENST00000517514 PPP1R1BQ9UD71 204 aaPredicted RBP12.39□□□□□ -0.43
CLN8-202ENST00000517514 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
CLN8-202ENST00000517514 H0YIN7 160 aa12.38□□□□□ -0.43
CLN8-202ENST00000517514 NPR1P16066 1061 aa12.38□□□□□ -0.43
CLN8-202ENST00000517514 ITGA6P23229 1130 aa12.38□□□□□ -0.43
CLN8-202ENST00000517514 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
CLN8-202ENST00000517514 CCDC152Q4G0S7 254 aa12.38□□□□□ -0.43
CLN8-202ENST00000517514 KLHDC4Q8TBB5 520 aa12.38□□□□□ -0.43
CLN8-202ENST00000517514 SSH3Q8TE77 659 aa12.38□□□□□ -0.43
CLN8-202ENST00000517514 HSP90B1P14625 803 aaKnown RBP12.37□□□□□ -0.43
CLN8-202ENST00000517514 GRAPQ13588 217 aa12.37□□□□□ -0.43
CLN8-202ENST00000517514 OLFM4Q6UX06 510 aa12.37□□□□□ -0.43
CLN8-202ENST00000517514 GRAPLQ8TC17 118 aaPredicted RBP12.37□□□□□ -0.43
CLN8-202ENST00000517514 C7orf43Q8WVR3 580 aa12.37□□□□□ -0.43
CLN8-202ENST00000517514 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
CLN8-202ENST00000517514 PA2G4Q9UQ80 394 aaKnown RBP12.37□□□□□ -0.43
CLN8-202ENST00000517514 FER1L6Q2WGJ9 1857 aa12.36□□□□□ -0.43
CLN8-202ENST00000517514 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
CLN8-202ENST00000517514 DDX46Q7L014 1031 aaKnown RBP12.36□□□□□ -0.43
CLN8-202ENST00000517514 RPGRQ92834 1020 aaKnown RBP12.36□□□□□ -0.43
CLN8-202ENST00000517514 ZNF622Q969S3 477 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLN8-202ENST00000517514 RBM17Q96I25 401 aaKnown RBP12.36□□□□□ -0.43
CLN8-202ENST00000517514 PUS3Q9BZE2 481 aaKnown RBP12.36□□□□□ -0.43
CLN8-202ENST00000517514 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
CLN8-202ENST00000517514 CHMP3Q9Y3E7 222 aa12.36□□□□□ -0.43
CLN8-202ENST00000517514 DUOX1Q9NRD9 1551 aa12.35□□□□□ -0.43
CLN8-202ENST00000517514 RPS8P62241 208 aaKnown RBP12.35□□□□□ -0.43
CLN8-202ENST00000517514 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
CLN8-202ENST00000517514 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
CLN8-202ENST00000517514 PRPF40BQ6NWY9 871 aaKnown RBP12.35□□□□□ -0.43
CLN8-202ENST00000517514 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
CLN8-202ENST00000517514 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
CLN8-202ENST00000517514 CHMP4BQ9H444 224 aaKnown RBP12.35□□□□□ -0.43
CLN8-202ENST00000517514 COPRSQ9NQ92 184 aa12.35□□□□□ -0.43
CLN8-202ENST00000517514 HDAC5Q9UQL6 1122 aa12.35□□□□□ -0.43
CLN8-202ENST00000517514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
CLN8-202ENST00000517514 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
CLN8-202ENST00000517514 ALDH1B1P30837 517 aa12.34□□□□□ -0.43
CLN8-202ENST00000517514 TTLL6Q8N841 843 aa12.34□□□□□ -0.43
CLN8-202ENST00000517514 CNKSR1Q969H4 720 aa12.34□□□□□ -0.43
CLN8-202ENST00000517514 PIM2Q9P1W9 311 aa12.34□□□□□ -0.43
CLN8-202ENST00000517514 RIPOR2Q9Y4F9 1068 aa12.34□□□□□ -0.43
CLN8-202ENST00000517514 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
CLN8-202ENST00000517514 BBOX1O75936 387 aa12.33□□□□□ -0.44
CLN8-202ENST00000517514 IGHDP01880 384 aa12.33□□□□□ -0.44
CLN8-202ENST00000517514 AAMPQ13685 434 aa12.33□□□□□ -0.44
CLN8-202ENST00000517514 CCDC57Q2TAC2 916 aa12.33□□□□□ -0.44
CLN8-202ENST00000517514 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
CLN8-202ENST00000517514 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
CLN8-202ENST00000517514 NOP58Q9Y2X3 529 aaKnown RBP12.33□□□□□ -0.44
CLN8-202ENST00000517514 CCDC88AQ3V6T2 1871 aa12.32□□□□□ -0.44
CLN8-202ENST00000517514 PPEF1O14829 653 aaPredicted RBP12.32□□□□□ -0.44
CLN8-202ENST00000517514 YBX3P16989 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLN8-202ENST00000517514 CDC5LQ99459 802 aaKnown RBP12.32□□□□□ -0.44
CLN8-202ENST00000517514 SIL1Q9H173 461 aa12.32□□□□□ -0.44
CLN8-202ENST00000517514 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
CLN8-202ENST00000517514 ATP6V0A2Q9Y487 856 aa12.32□□□□□ -0.44
CLN8-202ENST00000517514 SBF1O95248 1867 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms