RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CDC25BP30305 580 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 PIP4K2AP48426 406 aaPredicted RBP7.73□□□□□ -1.17
CPNE3-203ENST00000517490 PSME1Q06323 249 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 ARHGAP29Q52LW3 1261 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 CDC37L1Q7L3B6 337 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 LSG1Q9H089 658 aaKnown RBP7.73□□□□□ -1.17
CPNE3-203ENST00000517490 ZSWIM6Q9HCJ5 1215 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 MAP3K2Q9Y2U5 619 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 CDK12Q9NYV4 1490 aaPredicted RBP7.73□□□□□ -1.17
CPNE3-203ENST00000517490 LIG1P18858 919 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 MRFAP1L1Q96HT8 127 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.73□□□□□ -1.17
CPNE3-203ENST00000517490 MRVI1Q9Y6F6 885 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 SLC27A2O14975 620 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 GUCY1B3Q02153 619 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 FAM160A1Q05DH4 1040 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 LRMPQ12912 555 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 SYT10Q6XYQ8 523 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 Q6ZUG5 572 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 ADGRB3O60242 1522 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 ELF2Q15723 593 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 ME3Q16798 604 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 TTC6Q86TZ1 520 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 ARFGAP3Q9NP61 516 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 CHPF2Q9P2E5 772 aa7.73□□□□□ -1.17
CPNE3-203ENST00000517490 CCT2P78371 535 aaKnown RBP7.72□□□□□ -1.17
CPNE3-203ENST00000517490 IMMTQ16891 758 aaKnown RBP7.72□□□□□ -1.17
CPNE3-203ENST00000517490 FAM173BQ6P4H8 233 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 RAPGEF4Q8WZA2 1011 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 LRRC7Q96NW7 1537 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 ERICH2A1L162 156 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 KIF5CO60282 957 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 CCDC158Q5M9N0 1113 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 ZNF330Q9Y3S2 320 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-203ENST00000517490 ARHGEF10O15013 1369 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 MAP3K5Q99683 1374 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 BIN1O00499 593 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 ATP2B3Q16720 1220 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 TRERF1Q96PN7 1200 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 RUFY1Q96T51 708 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 LLPHQ9BRT6 129 aaKnown RBP7.72□□□□□ -1.17
CPNE3-203ENST00000517490 NEURL4Q96JN8 1562 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 UBASH3AP57075 661 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 GNG11P61952 73 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 AMOTQ4VCS5 1084 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 CYB5RLQ6IPT4 315 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 UNC5CLQ8IV45 518 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 LRRC8AQ8IWT6 810 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 CCDC102AQ96A19 550 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 USP44Q9H0E7 712 aa7.72□□□□□ -1.17
CPNE3-203ENST00000517490 XBP1P17861 261 aa7.71□□□□□ -1.17
CPNE3-203ENST00000517490 RASEFQ8IZ41 740 aa7.71□□□□□ -1.17
CPNE3-203ENST00000517490 ZNF215Q9UL58 517 aaPredicted RBP7.71□□□□□ -1.17
CPNE3-203ENST00000517490 IFNKQ9P0W0 207 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 USP16Q9Y5T5 823 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 NRXN1Q9ULB1 1477 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 ZCCHC11Q5TAX3 1644 aaKnown RBP7.71□□□□□ -1.18
CPNE3-203ENST00000517490 HOXB7P09629 217 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 FAM69CQ0P6D2 419 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 MCMDC2Q4G0Z9 681 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 TTC39AQ5SRH9 613 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 TTLL5Q6EMB2 1281 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 KSR2Q6VAB6 950 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 CAGE1Q8TC20 777 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 EYA1Q99502 592 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.71□□□□□ -1.18
CPNE3-203ENST00000517490 PHAXQ9H814 394 aaKnown RBP7.71□□□□□ -1.18
CPNE3-203ENST00000517490 TULP4Q9NRJ4 1543 aa7.71□□□□□ -1.18
CPNE3-203ENST00000517490 IVLP07476 585 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 SART3Q15020 963 aaKnown RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 CCDC47Q96A33 483 aaKnown RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 MYOM1P52179 1685 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 GRM8O00222 908 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 LMAN1P49257 510 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 NCBP1Q09161 790 aaKnown RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 NAA16Q6N069 864 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 WASF1Q92558 559 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 GTF3C6Q969F1 213 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 PA2G4Q9UQ80 394 aaKnown RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 ADGRB2O60241 1585 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 PTPDC1A2A3K4 754 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 MYL6BP14649 208 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 MCM3P25205 808 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 TUBB4BP68371 445 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 TRIM22Q8IYM9 498 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 NOC3LQ8WTT2 800 aaKnown RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 TPCN1Q9ULQ1 816 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 SBNO1A3KN83 1393 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 ABCA9Q8IUA7 1624 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 USP32Q8NFA0 1604 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 NR1I2O75469 434 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 ZSCAN20P17040 1043 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 VASPP50552 380 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 PTH1RQ03431 593 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 KIF4BQ2VIQ3 1234 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 DHX32Q7L7V1 743 aaKnown RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 CNNM3Q8NE01 707 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 CCDC97Q96F63 343 aaPredicted RBP7.7□□□□□ -1.18
CPNE3-203ENST00000517490 DEF6Q9H4E7 631 aa7.7□□□□□ -1.18
CPNE3-203ENST00000517490 BRMS1Q9HCU9 246 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms