RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 GOLIM4O00461 696 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 KRT18P05783 430 aaKnown RBP12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 ZNF165P49910 485 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 ADGRB1O14514 1584 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 UBAP1LF5GYI3 381 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 CDKL5O76039 1030 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 CYP2E1P05181 493 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 HSPA4P34932 840 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 EVI5LQ96CN4 794 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 DACT1Q9NYF0 836 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 NEXMIFQ5QGS0 1516 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 MED14O60244 1454 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 TYRO3Q06418 890 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 LDHAL6AQ6ZMR3 332 aa12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 ARGLU1Q9NWB6 273 aaPredicted RBP12.63□□□□□ -0.39
PCDHGA1-202ENST00000517417 PTPN14Q15678 1187 aa12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 CT47A1Q5JQC4 288 aaPredicted RBP12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 LRRC59Q96AG4 307 aaKnown RBP12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 NAPBQ9H115 298 aa12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 CUL4AQ13619 759 aa12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 CCAR1Q8IX12 1150 aaKnown RBP12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 EXOC5O00471 708 aa12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 LUZP1Q86V48 1076 aa12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 VIRMAQ69YN4 1812 aaKnown RBP12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 RAD50Q92878 1312 aa12.62□□□□□ -0.39
PCDHGA1-202ENST00000517417 SGSM2O43147 1006 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 SSBP05455 408 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 SOGA3Q5TF21 947 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 CEP57L1Q8IYX8 460 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 CABLES1Q8TDN4 633 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 PIK3C2BO00750 1634 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 RGS12O14924 1447 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 HAND2P61296 217 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 CGNQ9P2M7 1197 aaKnown RBP12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 MAGEC2Q9UBF1 373 aaPredicted RBP12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 PNPLA6Q8IY17 1366 aa12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
PCDHGA1-202ENST00000517417 UNC5CLQ8IV45 518 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 CAGE1Q8TC20 777 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 PHAXQ9H814 394 aaKnown RBP12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 TRMT1Q9NXH9 659 aaKnown RBP12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 CCDC66A2RUB6 948 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 KCNA6P17658 529 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 SSH2Q76I76 1423 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 ZNF213O14771 459 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 USP5P45974 858 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 ZFYVE27Q5T4F4 411 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 DDX46Q7L014 1031 aaKnown RBP12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 RAB11FIP4Q86YS3 637 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 DNAJC25Q9H1X3 360 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 AOX1Q06278 1338 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 NPHP3Q7Z494 1330 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 SNRPA1P09661 255 aaKnown RBP12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 CAVIN4Q5BKX8 364 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
PCDHGA1-202ENST00000517417 ZPR1O75312 459 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 RANBP6O60518 1105 aaKnown RBP12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 MAP3K12Q12852 859 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 NGLY1Q96IV0 654 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 EYA1Q99502 592 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 ZNF652Q9Y2D9 606 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 IGSF3O75054 1194 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 HSP90B2PQ58FF3 399 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 CEP135Q66GS9 1140 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 PPFIBP1Q86W92 1011 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 C8orf76Q96K31 380 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 BCL2L12Q9HB09 334 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 TMEM2Q9UHN6 1383 aa12.59□□□□□ -0.39
PCDHGA1-202ENST00000517417 SMARCE1Q969G3 411 aa12.58□□□□□ -0.39
PCDHGA1-202ENST00000517417 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.39
PCDHGA1-202ENST00000517417 MAP3K19Q56UN5 1328 aa12.58□□□□□ -0.39
PCDHGA1-202ENST00000517417 PREX1Q8TCU6 1659 aa12.58□□□□□ -0.39
PCDHGA1-202ENST00000517417 CWC25Q9NXE8 425 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA1-202ENST00000517417 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
PCDHGA1-202ENST00000517417 RUFY3Q7L099 469 aa12.58□□□□□ -0.4
PCDHGA1-202ENST00000517417 RUFY1Q96T51 708 aa12.58□□□□□ -0.4
PCDHGA1-202ENST00000517417 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
PCDHGA1-202ENST00000517417 PA2G4Q9UQ80 394 aaKnown RBP12.58□□□□□ -0.4
PCDHGA1-202ENST00000517417 AATKQ6ZMQ8 1374 aa12.58□□□□□ -0.4
PCDHGA1-202ENST00000517417 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
PCDHGA1-202ENST00000517417 CREB3L3Q68CJ9 461 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 KIF18AQ8NI77 898 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 MKNK2Q9HBH9 465 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 ANO10Q9NW15 660 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 ATP7BP35670 1465 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 ERICH4A6NGS2 130 aa12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 U2AF2P26368 475 aaKnown RBP eCLIP12.57□□□□□ -0.4
PCDHGA1-202ENST00000517417 NMIQ13287 307 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms