RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 MKL2Q9ULH7 1088 aa10.22□□□□□ -0.77
SCARNA1-201ENST00000517138 SLC6A14Q9UN76 642 aa10.22□□□□□ -0.77
SCARNA1-201ENST00000517138 RNF225M0QZC1 329 aaPredicted RBP10.21□□□□□ -0.77
SCARNA1-201ENST00000517138 EGFRP00533 1210 aa10.21□□□□□ -0.77
SCARNA1-201ENST00000517138 ALAS2P22557 587 aa10.21□□□□□ -0.77
SCARNA1-201ENST00000517138 M0R082 166 aa10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 ABL1P00519 1130 aa10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 SERPINB4P48594 390 aa10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 COL9A3Q14050 684 aaPredicted RBP10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 C20orf204Q6ZNR8 217 aa10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 DHX32Q7L7V1 743 aaKnown RBP10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 ABTB2Q8N961 1025 aa10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 ZNF417Q8TAU3 575 aa10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 TRIM11Q96F44 468 aa10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 ZNF587Q96SQ5 575 aaPredicted RBP10.2□□□□□ -0.78
SCARNA1-201ENST00000517138 PHF20L1A8MW92 1017 aa10.19□□□□□ -0.78
SCARNA1-201ENST00000517138 MMP20O60882 483 aa10.19□□□□□ -0.78
SCARNA1-201ENST00000517138 MAP3K6O95382 1288 aa10.19□□□□□ -0.78
SCARNA1-201ENST00000517138 GDF11O95390 407 aa10.19□□□□□ -0.78
SCARNA1-201ENST00000517138 EIF1AXP47813 144 aaKnown RBP10.19□□□□□ -0.78
SCARNA1-201ENST00000517138 MICALL1Q8N3F8 863 aa10.19□□□□□ -0.78
SCARNA1-201ENST00000517138 EFCC1Q9HA90 598 aa10.19□□□□□ -0.78
SCARNA1-201ENST00000517138 UBAP1LF5GYI3 381 aa10.18□□□□□ -0.78
SCARNA1-201ENST00000517138 PLAURQ03405 335 aa10.18□□□□□ -0.78
SCARNA1-201ENST00000517138 HFE2Q6ZVN8 426 aa10.18□□□□□ -0.78
SCARNA1-201ENST00000517138 NUDT8Q8WV74 236 aa10.18□□□□□ -0.78
SCARNA1-201ENST00000517138 PIK3R5Q8WYR1 880 aa10.18□□□□□ -0.78
SCARNA1-201ENST00000517138 EDEM1Q92611 657 aa10.18□□□□□ -0.78
SCARNA1-201ENST00000517138 NUDT16Q96DE0 195 aaKnown RBP10.18□□□□□ -0.78
SCARNA1-201ENST00000517138 C11orf16Q9NQ32 467 aa10.18□□□□□ -0.78
SCARNA1-201ENST00000517138 A6NHS1 94 aa10.17□□□□□ -0.78
SCARNA1-201ENST00000517138 NOM1Q5C9Z4 860 aaKnown RBP10.17□□□□□ -0.78
SCARNA1-201ENST00000517138 TMEM151AQ8N4L1 468 aa10.17□□□□□ -0.78
SCARNA1-201ENST00000517138 DCAF5Q96JK2 942 aa10.17□□□□□ -0.78
SCARNA1-201ENST00000517138 GNB5O14775 395 aa10.16□□□□□ -0.78
SCARNA1-201ENST00000517138 CPB1P15086 417 aa10.16□□□□□ -0.78
SCARNA1-201ENST00000517138 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
SCARNA1-201ENST00000517138 KANK3Q6NY19 840 aa10.16□□□□□ -0.78
SCARNA1-201ENST00000517138 KCTD17Q8N5Z5 321 aa10.16□□□□□ -0.78
SCARNA1-201ENST00000517138 TRPM4Q8TD43 1214 aa10.16□□□□□ -0.78
SCARNA1-201ENST00000517138 GGNBP2Q9H3C7 697 aa10.16□□□□□ -0.78
SCARNA1-201ENST00000517138 TLR7Q9NYK1 1049 aaKnown RBP10.16□□□□□ -0.78
SCARNA1-201ENST00000517138 J3QW42 95 aa10.15□□□□□ -0.78
SCARNA1-201ENST00000517138 NPR3P17342 541 aa10.15□□□□□ -0.78
SCARNA1-201ENST00000517138 PSAPL1Q6NUJ1 521 aa10.15□□□□□ -0.78
SCARNA1-201ENST00000517138 FAM35AQ86V20 835 aa10.15□□□□□ -0.78
SCARNA1-201ENST00000517138 NLRP13Q86W25 1043 aa10.15□□□□□ -0.78
SCARNA1-201ENST00000517138 PDGFAP04085 211 aa10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 ITGB2P05107 769 aa10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 GPLD1P80108 840 aa10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 FKBP4Q02790 459 aaKnown RBP eCLIP10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 ECM1Q16610 540 aa10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 PERM1Q5SV97 790 aa10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 NSUN5Q96P11 429 aaKnown RBP10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 LPIN3Q9BQK8 851 aa10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 PLVAPQ9BX97 442 aa10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 FAM13BQ9NYF5 915 aa10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.14□□□□□ -0.79
SCARNA1-201ENST00000517138 NID1P14543 1247 aa10.13□□□□□ -0.79
SCARNA1-201ENST00000517138 COL13A1Q5TAT6 717 aaPredicted RBP10.13□□□□□ -0.79
SCARNA1-201ENST00000517138 TXNDC2Q86VQ3 553 aa10.13□□□□□ -0.79
SCARNA1-201ENST00000517138 JPH1Q9HDC5 661 aaPredicted RBP10.13□□□□□ -0.79
SCARNA1-201ENST00000517138 CCDC87Q9NVE4 849 aa10.13□□□□□ -0.79
SCARNA1-201ENST00000517138 TMEM63CQ9P1W3 806 aa10.13□□□□□ -0.79
SCARNA1-201ENST00000517138 POLIQ9UNA4 740 aa10.13□□□□□ -0.79
SCARNA1-201ENST00000517138 KRBA1A5PL33 1030 aa10.12□□□□□ -0.79
SCARNA1-201ENST00000517138 FZD6O60353 706 aa10.12□□□□□ -0.79
SCARNA1-201ENST00000517138 CYP2E1P05181 493 aaPredicted RBP10.12□□□□□ -0.79
SCARNA1-201ENST00000517138 ARID4AP29374 1257 aaPredicted RBP10.12□□□□□ -0.79
SCARNA1-201ENST00000517138 FAM229AH3BQW9 127 aa10.11□□□□□ -0.79
SCARNA1-201ENST00000517138 NRLP54845 237 aa10.11□□□□□ -0.79
SCARNA1-201ENST00000517138 PRDM6Q9NQX0 595 aa10.11□□□□□ -0.79
SCARNA1-201ENST00000517138 MTMR7Q9Y216 660 aa10.11□□□□□ -0.79
SCARNA1-201ENST00000517138 H3BRB1 525 aa10.1□□□□□ -0.79
SCARNA1-201ENST00000517138 ICMTO60725 284 aa10.1□□□□□ -0.79
SCARNA1-201ENST00000517138 LILRB5O75023 590 aa10.1□□□□□ -0.79
SCARNA1-201ENST00000517138 PSAPP07602 524 aa10.1□□□□□ -0.79
SCARNA1-201ENST00000517138 AFF1P51825 1210 aaKnown RBP10.1□□□□□ -0.79
SCARNA1-201ENST00000517138 SF3B2Q13435 895 aaKnown RBP10.1□□□□□ -0.79
SCARNA1-201ENST00000517138 B4GALNT3Q6L9W6 998 aa10.1□□□□□ -0.79
SCARNA1-201ENST00000517138 TUT1Q9H6E5 874 aaKnown RBP10.1□□□□□ -0.79
SCARNA1-201ENST00000517138 CNTN3Q9P232 1028 aa10.1□□□□□ -0.79
SCARNA1-201ENST00000517138 LOC102724428A0A0B4J2F2 783 aa10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 FAM13AO94988 1023 aa10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 MZF1P28698 734 aaPredicted RBP10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 SIK1P57059 783 aa10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 AAMPQ13685 434 aa10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 GRIK5Q16478 980 aa10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 C8orf34Q49A92 452 aa10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 OR13H1Q8NG92 308 aa10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 ELP3Q9H9T3 547 aa10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 FNDC3AQ9Y2H6 1198 aaKnown RBP10.09□□□□□ -0.79
SCARNA1-201ENST00000517138 RGS9O75916 674 aaPredicted RBP10.08□□□□□ -0.8
SCARNA1-201ENST00000517138 EIF2AK2P19525 551 aaKnown RBP10.08□□□□□ -0.8
SCARNA1-201ENST00000517138 PLA2G4EQ3MJ16 856 aa10.08□□□□□ -0.8
SCARNA1-201ENST00000517138 ZNF438Q7Z4V0 828 aa10.08□□□□□ -0.8
SCARNA1-201ENST00000517138 SMG9Q9H0W8 520 aaKnown RBP10.08□□□□□ -0.8
SCARNA1-201ENST00000517138 ABI2Q9NYB9 513 aaPredicted RBP10.08□□□□□ -0.8
SCARNA1-201ENST00000517138 HOXD8P13378 290 aaPredicted RBP10.07□□□□□ -0.8
SCARNA1-201ENST00000517138 SOX18P35713 384 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms