RNA–Protein interactions for RNA: ENST00000516986.1

RNU6-56P-201, Transcript of RNA, U6 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU6-56P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-56P-201ENST00000516986 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 FAM184AQ8NB25 1140 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 TMEM87AQ8NBN3 555 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 AFAP1L1Q8TED9 768 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 TBC1D22AQ8WUA7 517 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 USP6NLQ92738 828 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 RNF34Q969K3 372 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 ATP6V1E2Q96A05 226 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 SKA1Q96BD8 255 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 TBATAQ96M53 351 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 TIGD1Q96MW7 591 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 GMLQ99445 158 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 CSRNP2Q9H175 543 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 RPAP3Q9H6T3 665 aaPredicted RBP3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 VEZTQ9HBM0 779 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 LGR6Q9HBX8 967 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 ARNT2Q9HBZ2 717 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 RIC8AQ9NPQ8 531 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 TRPV5Q9NQA5 729 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 KMT5AQ9NQR1 393 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 SNRKQ9NRH2 765 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 HOXC10Q9NYD6 342 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 TMOD4Q9NZQ9 345 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 CALCOCO1Q9P1Z2 691 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 EPS15L1Q9UBC2 864 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 CLIP2Q9UDT6 1046 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 SLC45A1Q9Y2W3 748 aa3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 MRPS23Q9Y3D9 190 aaKnown RBP3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 U3KPZ7 1027 aaPredicted RBP3.38□□□□□ -1.87
RNU6-56P-201ENST00000516986 GOLGA6L10A0A0M3HER8 536 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 PALM3A6NDB9 673 aaPredicted RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 COBLO75128 1261 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 NR1I2O75469 434 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 KRT38O76015 456 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 HARSP12081 509 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 HSPA4P34932 840 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 USP8P40818 1118 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 CHMP4BP1P59074 171 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 IRX5P78411 483 aaPredicted RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 IRX1P78414 480 aaPredicted RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 NUCB2P80303 420 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 MDM2Q00987 491 aaPredicted RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 AMPD3Q01432 767 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 EXOSC10Q01780 885 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 CCDC15Q0P6D6 951 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 CCDC173Q0VFZ6 552 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 MRPL28Q13084 256 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 TOMM20Q15388 145 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 ZSCAN26Q16670 478 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 COBLL1Q53SF7 1204 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 PLEKHG4Q58EX7 1191 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 NOM1Q5C9Z4 860 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 DNAJC21Q5F1R6 531 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 ARSHQ5FYA8 562 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 CCDC122Q5T0U0 273 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 ACBD5Q5T8D3 534 aaPredicted RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 RNF20Q5VTR2 975 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 LRRC49Q8IUZ0 686 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 GABPB2Q8TAK5 448 aaPredicted RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 GSDMBQ8TAX9 411 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 RTF1Q92541 710 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 TAF4BQ92750 862 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 DDX12PQ92771 950 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 JARID2Q92833 1246 aaPredicted RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 SCLT1Q96NL6 688 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 IER2Q9BTL4 223 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 UNC45AQ9H3U1 944 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 MRS2Q9HD23 443 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 METTL5Q9NRN9 209 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 TRMT1Q9NXH9 659 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 QPCTLQ9NXS2 382 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 STIM2Q9P246 746 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 RABL2AQ9UBK7 228 aaPredicted RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 ZMAT5Q9UDW3 170 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 PGAP2Q9UHJ9 254 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 CTNNA3Q9UI47 895 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 CFAP45Q9UL16 551 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 ITM2BQ9Y287 266 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 RRP15Q9Y3B9 282 aaKnown RBP3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 RAD50Q92878 1312 aa3.37□□□□□ -1.87
RNU6-56P-201ENST00000516986 SOCS7O14512 581 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 PRPF40AO75400 957 aaKnown RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 ERLIN1O75477 346 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 CDKL5O76039 1030 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 IFIT2P09913 472 aaKnown RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 C7P10643 843 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 SKILP12757 684 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 SLC5A1P13866 664 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 ATF7P17544 494 aaPredicted RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 ATF3P18847 181 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 PDE4AP27815 886 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 RDXP35241 583 aaKnown RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 MLLT3P42568 568 aaPredicted RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 EPHB1P54762 984 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 PLIN5Q00G26 463 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 IKQ13123 557 aaPredicted RBP3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 MORC3Q14149 939 aa3.36□□□□□ -1.87
RNU6-56P-201ENST00000516986 SIM2Q14190 667 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms